Detection and analysis of horizontal gene transfer in herpesvirus.
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Riqiang Deng | Jinwen Wang | R. Deng | Xunzhang Wang | M. Fu | Minghui Fu | Jinwen Wang | Xunzhang Wang
[1] N. Saitou,et al. The neighbor-joining method: a new method for reconstructing phylogenetic trees. , 1987, Molecular biology and evolution.
[2] J. Felsenstein. Phylogenies from molecular sequences: inference and reliability. , 1988, Annual review of genetics.
[3] S Karlin,et al. A method to identify distinctive charge configurations in protein sequences, with application to human herpesvirus polypeptides. , 1989, Journal of molecular biology.
[4] E. van Heerde,et al. Gene mapping and expression of two immunodominant Epstein-Barr virus capsid proteins , 1993, Journal of virology.
[5] M. Syvanen. Horizontal gene transfer: evidence and possible consequences. , 1994, Annual review of genetics.
[6] J. Thompson,et al. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. , 1994, Nucleic acids research.
[7] C. Boshoff,et al. Molecular Mimicry of Human Cytokine and Cytokine Response Pathway Genes by KSHV , 1996, Science.
[8] Thomas L. Madden,et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. , 1997, Nucleic acids research.
[9] H. Ochman,et al. Amelioration of Bacterial Genomes: Rates of Change and Exchange , 1997, Journal of Molecular Evolution.
[10] D. Lipman,et al. A genomic perspective on protein families. , 1997, Science.
[11] H. Ochman,et al. Molecular archaeology of the Escherichia coli genome. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[12] S Karlin,et al. Detecting Alien Genes in Bacterial Genomes a , 1999, Annals of the New York Academy of Sciences.
[13] M. A. McClure,et al. Evolution and Horizontal Transfer of dUTPase-Encoding Genes in Viruses and Their Hosts , 1999, Journal of Virology.
[14] G. McFadden,et al. Host-related immunomodulators encoded by poxviruses and herpesviruses. , 2000, Current opinion in microbiology.
[15] S. Garcia-Vallvé,et al. Horizontal gene transfer in bacterial and archaeal complete genomes. , 2000, Genome research.
[16] Fred Wang,et al. Structural, Functional, and Genetic Comparisons of Epstein-Barr Virus Nuclear Antigen 3A, 3B, and 3C Homologues Encoded by the Rhesus Lymphocryptovirus , 2000, Journal of Virology.
[17] A. Alcamí,et al. Viral mechanisms of immune evasion , 2000, Immunology Today.
[18] R. Sandberg,et al. Capturing whole-genome characteristics in short sequences using a naïve Bayesian classifier. , 2001, Genome research.
[19] W. Zimmermann,et al. Genome Sequence of Bovine Herpesvirus 4, a Bovine Rhadinovirus, and Identification of an Origin of DNA Replication , 2001, Journal of Virology.
[20] S Karlin,et al. Detecting anomalous gene clusters and pathogenicity islands in diverse bacterial genomes. , 2001, Trends in microbiology.
[21] A. Hughes. Origin and Evolution of Viral Interleukin-10 and Other DNA Virus Genes with Vertebrate Homologues , 2002, Journal of Molecular Evolution.
[22] P. Rivailler,et al. Complete Nucleotide Sequence of the Rhesus Lymphocryptovirus: Genetic Validation for an Epstein-Barr Virus Animal Model , 2002, Journal of Virology.
[23] Andrew J Davison,et al. Evolution of the herpesviruses. , 2002, Veterinary microbiology.
[24] Paul Kellam,et al. Identification of new herpesvirus gene homologs in the human genome. , 2002, Genome research.
[25] Howard Ochman,et al. Reconciling the many faces of lateral gene transfer. , 2002, Trends in microbiology.
[26] J. Lake,et al. Horizontal gene transfer in microbial genome evolution. , 2002, Theoretical population biology.
[27] D. Bellows,et al. Epstein-Barr Virus BALF1 Is a BCL-2-Like Antagonist of the Herpesvirus Antiapoptotic BCL-2 Proteins , 2002, Journal of Virology.
[28] W. Zimmermann,et al. The Core 2 β-1,6-N-Acetylglucosaminyltransferase-Mucin Encoded by Bovine Herpesvirus 4 Was Acquired from an Ancestor of the African Buffalo , 2003, Journal of Virology.
[29] S. Hansen,et al. Complete Sequence and Genomic Analysis of Rhesus Cytomegalovirus , 2003, Journal of Virology.
[30] J. Lake,et al. Horizontal gene transfer accelerates genome innovation and evolution. , 2003, Molecular biology and evolution.
[31] Darren A. Natale,et al. The COG database: an updated version includes eukaryotes , 2003, BMC Bioinformatics.
[32] Santiago Garcia-Vallvé,et al. HGT-DB: a database of putative horizontally transferred genes in prokaryotic complete genomes , 2003, Nucleic Acids Res..
[33] E. Holmes,et al. The evolution of large DNA viruses: combining genomic information of viruses and their hosts. , 2004, Trends in microbiology.
[34] M. Chase,et al. Proteins of purified Epstein-Barr virus. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[35] M. Raftery,et al. Herpesvirus Homologues of Cellular Genes , 2004, Virus Genes.
[36] H. Matsuda,et al. Biased biological functions of horizontally transferred genes in prokaryotic genomes , 2004, Nature Genetics.
[37] Aristotelis Tsirigos,et al. A sensitive, support-vector-machine method for the detection of horizontal gene transfers in viral, archaeal and bacterial genomes , 2005, Nucleic acids research.
[38] M. Rosenkilde,et al. Epstein-Barr Virus-Encoded BILF1 Is a Constitutively Active G Protein-Coupled Receptor , 2005, Journal of Virology.
[39] Aristotelis Tsirigos,et al. A new computational method for the detection of horizontal gene transfer events , 2005, Nucleic acids research.
[40] A. Davison,et al. New Genes from Old: Redeployment of dUTPase by Herpesviruses , 2005, Journal of Virology.
[41] J. Townsend,et al. Horizontal gene transfer, genome innovation and evolution , 2005, Nature Reviews Microbiology.
[42] D. Liu,et al. Biochemical and functional characterization of Epstein–Barr virus-encoded BARF1 protein: interaction with human hTid1 protein facilitates its maturation and secretion , 2006, Oncogene.