Leukemia diagnosis in blood slides using transfer learning in CNNs and SVM for classification

Abstract Leukemia is a pathology that affects young people and adults, causing premature death and several other symptoms. Computer-aided systems can be used to reduce the possibility of prescribing inappropriate treatments and assist specialists in the diagnosis of this disease. There is a growing use of Convolutional Neural Networks (CNNs) in the classification and diagnosis of medical image problems. However, the training of CNNs requires a large set of images. To overcome this problem, we use transfer learning to extract images features for further classification. We tested three state-of-the-art CNN architectures and the features were selected according to their gain ratios and used as input to the Support Vector Machine classifier. The proposed methodology aims to correctly classify images with different characteristics derived from different image databases and does not require a segmentation process. We built a new database from the union of three distinct databases presented in the literature to validate the proposed methodology. The proposed methodology achieved hit rates above 99% and outperformed nine methods found in the literature.

[1]  Nauman Aslam,et al.  An Intelligent Decision Support System for Leukaemia Diagnosis using Microscopic Blood Images , 2015, Scientific Reports.

[2]  Hossein Rabbani,et al.  Detecting different sub-types of acute myelogenous leukemia using dictionary learning and sparse representation , 2015, 2015 IEEE International Conference on Image Processing (ICIP).

[3]  Alex Pentland,et al.  Fractal-Based Description of Natural Scenes , 1984, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[4]  Ki-Ryong Kwon,et al.  Acute lymphoid leukemia classification using two-step neural network classifier , 2015, 2015 21st Korea-Japan Joint Workshop on Frontiers of Computer Vision (FCV).

[5]  Isabelle Guyon,et al.  An Introduction to Feature Extraction , 2006, Feature Extraction.

[6]  Ronald M. Summers,et al.  Deep Convolutional Neural Networks for Computer-Aided Detection: CNN Architectures, Dataset Characteristics and Transfer Learning , 2016, IEEE Transactions on Medical Imaging.

[7]  Nikos E. Mastorakis,et al.  Multilayer perceptron and neural networks , 2009 .

[8]  Geoffrey E. Hinton,et al.  Deep Learning , 2015, Nature.

[9]  Cecilia Di Ruberto,et al.  Leucocyte classification for leukaemia detection using image processing techniques , 2014, Artif. Intell. Medicine.

[10]  Hossein Rabbani,et al.  Selection of the best features for leukocytes classification in blood smear microscopic images , 2014, Medical Imaging.

[11]  Sos S. Agaian,et al.  A new acute leukaemia-automated classification system , 2018, Comput. methods Biomech. Biomed. Eng. Imaging Vis..

[12]  Ian H. Witten,et al.  The WEKA data mining software: an update , 2009, SKDD.

[13]  Vanika Singhal,et al.  Texture Features for the Detection of Acute Lymphoblastic Leukemia , 2016 .

[14]  Nima Tajbakhsh,et al.  Convolutional Neural Networks for Medical Image Analysis: Full Training or Fine Tuning? , 2016, IEEE Transactions on Medical Imaging.

[15]  Alireza Mehri Dehnavi,et al.  Nucleus and cytoplasm segmentation in microscopic images using K-means clustering and region growing , 2015, Advanced biomedical research.

[16]  Ashutosh Mishra,et al.  Automated Leukaemia Detection Using Microscopic Images , 2015 .

[17]  Friedhelm Schwenker,et al.  Three learning phases for radial-basis-function networks , 2001, Neural Networks.

[18]  David M. W. Powers,et al.  Evaluation: from precision, recall and F-measure to ROC, informedness, markedness and correlation , 2011, ArXiv.

[19]  Michael S. Bernstein,et al.  ImageNet Large Scale Visual Recognition Challenge , 2014, International Journal of Computer Vision.

[20]  Leo Breiman,et al.  Random Forests , 2001, Machine Learning.

[21]  Jay S. Raval,et al.  Experience with CellaVision DM96 for peripheral blood differentials in a large multi-center academic hospital system , 2012, Journal of pathology informatics.

[22]  David Dagan Feng,et al.  An Ensemble of Fine-Tuned Convolutional Neural Networks for Medical Image Classification , 2017, IEEE Journal of Biomedical and Health Informatics.

[23]  Dipti Patra,et al.  An ensemble classifier system for early diagnosis of acute lymphoblastic leukemia in blood microscopic images , 2013, Neural Computing and Applications.

[24]  Geoffrey E. Hinton,et al.  ImageNet classification with deep convolutional neural networks , 2012, Commun. ACM.

[25]  Trevor Darrell,et al.  Caffe: Convolutional Architecture for Fast Feature Embedding , 2014, ACM Multimedia.

[26]  Nir Friedman,et al.  Bayesian Network Classifiers , 1997, Machine Learning.

[27]  Dong-Chen He,et al.  Texture Unit, Texture Spectrum, And Texture Analysis , 1990 .

[28]  Corinna Cortes,et al.  Support-Vector Networks , 1995, Machine Learning.

[29]  David W. Aha,et al.  Instance-Based Learning Algorithms , 1991, Machine Learning.