Plastid and nuclear DNA markers reveal intricate relationships at subfamilial and tribal levels in the soapberry family (Sapindaceae).

[1]  J. Lundberg,et al.  An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants : APG II THE ANGIOSPERM PHYLOGENY GROUP * , 2003 .

[2]  Susan Kelley,et al.  Flora of China , 2008 .

[3]  J. Rougemont,et al.  A rapid bootstrap algorithm for the RAxML Web servers. , 2008, Systematic biology.

[4]  D. Soltis,et al.  Molecular Phylogeny of the Tree‐of‐Heaven Family (Simaroubaceae) Based on Chloroplast and Nuclear Markers , 2007, International Journal of Plant Sciences.

[5]  S. Renner,et al.  Placing Biebersteiniaceae, a herbaceous clade of Sapindales, in a temporal and geographic context , 2007, Plant Systematics and Evolution.

[6]  R. Thorne,et al.  An updated classification of the class Magnoliopsida (“Angiospermae”) , 2007, The Botanical Review.

[7]  D. Morrison Multiple sequence alignment for phylogenetic purposes , 2006 .

[8]  Alexandros Stamatakis,et al.  RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models , 2006, Bioinform..

[9]  M. Chase,et al.  The mahogany family "out-of-Africa": divergence time estimation, global biogeographic patterns inferred from plastid rbcL DNA sequences, extant, and fossil distribution of diversity. , 2006, Molecular phylogenetics and evolution.

[10]  B. Pickersgill Genetic Diversity of Cultivated Tropical Plants , 2006 .

[11]  John J. Wiens,et al.  Missing data and the design of phylogenetic analyses , 2006, J. Biomed. Informatics.

[12]  J. Wiens Can incomplete taxa rescue phylogenetic analyses from long-branch attraction? , 2005, Systematic biology.

[13]  Oliver Eulenstein,et al.  The shape of supertrees to come: tree shape related properties of fourteen supertree methods. , 2005, Systematic biology.

[14]  M. Chase,et al.  Aglaia (Meliaceae): an evaluation of taxonomic concepts based on DNA data and secondary metabolites. , 2005, American journal of botany.

[15]  M. Chase,et al.  Phylogenetic Inference in Sapindaceae sensu lato Using Plastid matK and rbcL DNA Sequences , 2005 .

[16]  J. G. Burleigh,et al.  Prospects for Building the Tree of Life from Large Sequence Databases , 2004, Science.

[17]  Michael P. Cummings,et al.  PAUP* [Phylogenetic Analysis Using Parsimony (and Other Methods)] , 2004 .

[18]  P. Holland,et al.  Phylogenomics of eukaryotes: impact of missing data on large alignments. , 2004, Molecular biology and evolution.

[19]  J. Wiens,et al.  Missing data, incomplete taxa, and phylogenetic accuracy. , 2003, Systematic biology.

[20]  Serdar Tasiran,et al.  TreeJuxtaposer: scalable tree comparison using Focus+Context with guaranteed visibility , 2003, ACM Trans. Graph..

[21]  Nicolas Salamin,et al.  Assessing internal support with large phylogenetic DNA matrices. , 2003, Molecular phylogenetics and evolution.

[22]  M. Chase,et al.  Molecular phylogenetics of Meliaceae (Sapindales) based on nuclear and plastid DNA sequences. , 2003, American journal of botany.

[23]  Terry Gaasterland,et al.  The analysis of 100 genes supports the grouping of three highly divergent amoebae: Dictyostelium, Entamoeba, and Mastigamoeba , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[24]  P. Gadek,et al.  Evolution and biogeography of Alectryon (Sapindaceae). , 2001, Molecular phylogenetics and evolution.

[25]  F. Forest,et al.  A morphological phylogenetic analysis of Aesculus L. and Billia Peyr. (Sapindaceae) , 2001 .

[26]  W. Kress,et al.  Angiosperm phylogeny inferred from 18S rDNA, rbcL, and atpB sequences , 2000 .

[27]  R. Thorne The classification and geography of the flowering plants: Dicotyledons of the class Angiospermae , 2000, The Botanical Review.

[28]  Hamilton,et al.  Four primer pairs for the amplification of chloroplast intergenic regions with intraspecific variation , 1999, Molecular ecology.

[29]  J. Wiens Does adding characters with missing data increase or decrease phylogenetic accuracy? , 1998, Systematic biology.

[30]  C. dePamphilis,et al.  ORIGIN AND BIOGEOGRAPHY OF AESCULUS L. (HIPPOCASTANACEAE): A MOLECULAR PHYLOGENETIC PERSPECTIVE , 1998, Evolution; international journal of organic evolution.

[31]  H. Beentje,et al.  Flora of Tropical East Africa--Sapindaceae (1998) , 1998 .

[32]  J. Thompson,et al.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. , 1997, Nucleic acids research.

[33]  M. Chase,et al.  Sapindales:Molecular delimitation and infraordinal groups , 1996 .

[34]  M. Duarte,et al.  Sapindaceae , 1995, Plants of the Rio Grande Delta.

[35]  J. Wiens,et al.  Combining data sets with different numbers of taxa for phylogenetic analysis , 1995 .

[36]  R. Petit,et al.  A set of universal primers for amplification of polymorphic non‐coding regions of mitochondrial and chloroplast DNA in plants , 1995, Molecular ecology.

[37]  C. Bult,et al.  TESTING SIGNIFICANCE OF INCONGRUENCE , 1994 .

[38]  Z. Yang,et al.  Maximum-likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites. , 1993, Molecular biology and evolution.

[39]  Pedro Acevedo-Rodríguez A Revision of Lophostigma (Sapindaceae) , 1993 .

[40]  George F. Estabrook,et al.  Evaluating Undirected Positional Congruence of Individual Taxa Between Two Estimates of the Phylogenetic Tree for a Group of Taxa , 1992 .

[41]  B. G. Baldwin Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: an example from the compositae. , 1992, Molecular phylogenetics and evolution.

[42]  John P. Huelsenbeck,et al.  WHEN ARE FOSSILS BETTER THAN EXTANT TAXA IN PHYLOGENETIC ANALYSIS , 1991 .

[43]  P. Taberlet,et al.  Universal primers for amplification of three non-coding regions of chloroplast DNA , 1991, Plant Molecular Biology.

[44]  M. Chase,et al.  Silica gel: An ideal material for field preservation of leaf samples for DNA studies , 1991 .

[45]  G. Dahlgren An updated angiosperm classification , 1989 .

[46]  A. Cronquist The evolution and classification of flowering plants , 1989 .

[47]  A. Kluge A Concern for Evidence and a Phylogenetic Hypothesis of Relationships among Epicrates (Boidae, Serpentes) , 1989 .

[48]  J. Felsenstein CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP , 1985, Evolution; international journal of organic evolution.

[49]  Fred R. McMorris,et al.  COMPARISON OF UNDIRECTED PHYLOGENETIC TREES BASED ON SUBTREES OF FOUR EVOLUTIONARY UNITS , 1985 .

[50]  R. Spichiger,et al.  Flora del Paraguay , 1984 .

[51]  S. Rauschert Nomina nova generica et combinationes novae Spermatophytorum et Pteridophytorum , 1982 .

[52]  J. Muller,et al.  A general survey of pollen types in Sapindaceae in relation to taxonomy , 1976 .

[53]  I. Ferguson,et al.  The Evolutionary significance of the exine , 1976 .

[54]  Apgii An update of the angiosperm phylogeny group classification for the orders and families of flowering plants : APGII , 2003 .

[55]  J. Ohn,et al.  Does Adding Characters with Missing Data Increase or Decrease Phylogenetic Accuracy ? , 2003 .

[56]  Walter Sermeus,et al.  Data analysis methods. , 2002, Studies in health technology and informatics.

[57]  D. Swofford PAUP*: Phylogenetic analysis using parsimony (*and other methods), Version 4.0b10 , 2002 .

[58]  W. M. Whitten,et al.  Phylogeny of the eudicots : a nearly complete familial analysis based on rbcL gene sequences , 2000 .

[59]  M. Chase,et al.  A Revision of the Tribal Classification of Rhamnaceae , 2000 .

[60]  K. Nixon,et al.  The Parsimony Ratchet, a New Method for Rapid Parsimony Analysis , 1999, Cladistics : the international journal of the Willi Hennig Society.

[61]  M. Chase,et al.  A phylogenetic analysis of Rhamnaceae using rbcL and trnL-F plastid DNA sequences. , 2000, American journal of botany.

[62]  M. P. Cummings,et al.  PAUP* Phylogenetic analysis using parsimony (*and other methods) Version 4 , 2000 .

[63]  R. Klaassen Wood anatomy of the Sapindaceae , 1999 .

[64]  D. Harris,et al.  New Sapindaceae from Cameroon and Nigeria , 1999 .

[65]  T. A. Hall,et al.  BIOEDIT: A USER-FRIENDLY BIOLOGICAL SEQUENCE ALIGNMENT EDITOR AND ANALYSIS PROGRAM FOR WINDOWS 95/98/ NT , 1999 .

[66]  David Posada,et al.  MODELTEST: testing the model of DNA substitution , 1998, Bioinform..

[67]  Douglas E. Soltis,et al.  Choosing an Approach and an Appropriate Gene for Phylogenetic Analysis , 1998 .

[68]  F. Davies A new genus Haplocoelopsis (Sapindaceae) from East and Central Africa , 1997 .

[69]  A. Davis A NEW SPECIES OF SYZYGIUM GAERTN. (MYRTACEAE) FROM N BORNEO : SYZYGIUM VELUTINUM A. P. DAVIS , 1997 .

[70]  M. Donoghue,et al.  Angiosperm family pairs: Preliminary phylogenetic analysis , 1994 .

[71]  P. Welzen,et al.  Flora Malesiana. Series I, Spermatophyta: flowering plants. Volume 11, part 3: Sapindaceae. , 1994 .

[72]  I. Umadevi,et al.  Chemosystematics of the Sapindaceae , 1991 .

[73]  Frits Adema Cupaniopsis Radlk. (Sapindaceae) a monograph , 1991 .

[74]  T. White Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics , 1990 .

[75]  R. V. D. Ham Nephelieae pollen (Sapindaceae): Form, function, and evolution , 1990 .

[76]  Thomas J. White,et al.  PCR protocols: a guide to methods and applications. , 1990 .

[77]  van Welzen,et al.  Guioa cav. (Sapindaceae): Taxonomy, phylogeny, and historical biogeography , 1989 .

[78]  E. Pahlich,et al.  A rapid DNA isolation procedure for small quantities of fresh leaf tissue , 1980 .

[79]  D. Biesboer Pollen Morphology of the Aceraceae , 1975 .

[80]  H. Akaike,et al.  Information Theory and an Extension of the Maximum Likelihood Principle , 1973 .

[81]  A. George,et al.  A Revision of the Genus Diplopeltis Endl. (Sapindaceae) , 1969 .