Deterministic and Stochastic Regimes of Asexual Evolution on Rugged Fitness Landscapes
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[1] Paul Higgs,et al. Error thresholds and stationary mutant distributions in multi-locus diploid genetics models , 1994 .
[2] Nigel F. Delaney,et al. Darwinian Evolution Can Follow Only Very Few Mutational Paths to Fitter Proteins , 2006, Science.
[3] Martin A Nowak,et al. Evolutionary dynamics of tumor suppressor gene inactivation. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[4] D. Krakauer,et al. Models of experimental evolution: the role of genetic chance and selective necessity. , 2000, Genetics.
[5] G. Yedid,et al. Macroevolution simulated with autonomously replicating computer programs , 2002, Nature.
[6] E. Lázaro. Genetic Variability in RNA Viruses: Consequences in Epidemiology and in the Development of New Stratgies for the Extinction of Infectivity , 2007, Structural Approaches to Sequence Evolution.
[7] A. Carter,et al. Evolution of functionally conserved enhancers can be accelerated in large populations: a population–genetic model , 2002, Proceedings of the Royal Society of London. Series B: Biological Sciences.
[8] Stephen P. Miller,et al. The Biochemical Architecture of an Ancient Adaptive Landscape , 2005, Science.
[9] J. Krug,et al. Adaptation in simple and complex fitness landscapes , 2005, q-bio/0508008.
[10] C. A. Macken,et al. Protein evolution on rugged landscapes. , 1989, Proceedings of the National Academy of Sciences of the United States of America.
[11] S. Majumdar,et al. Exact solution of a model of time-dependent evolutionary dynamics in a rugged fitness landscape , 2006, cond-mat/0606101.
[12] M. Whitlock,et al. MULTIPLE FITNESS PEAKS AND EPISTASIS , 1995 .
[13] J. Coffin,et al. Linkage disequilibrium test implies a large effective population number for HIV in vivo. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[14] B. Derrida,et al. Evolution in a flat fitness landscape , 1991 .
[15] J. B. S. Haldane,et al. A mathematical theory of natural and artificial selection—I , 1927, Mathematical Proceedings of the Cambridge Philosophical Society.
[16] W. Gabriel,et al. Biological evolution through mutation, selection, and drift: An introductory review , 1999, cond-mat/9907372.
[17] D. Weinreich,et al. RAPID EVOLUTIONARY ESCAPE BY LARGE POPULATIONS FROM LOCAL FITNESS PEAKS IS LIKELY IN NATURE , 2005, Evolution; international journal of organic evolution.
[18] R. Lenski,et al. The fate of competing beneficial mutations in an asexual population , 2004, Genetica.
[19] Mandy J. Haldane,et al. A Mathematical Theory of Natural and Artificial Selection, Part V: Selection and Mutation , 1927, Mathematical Proceedings of the Cambridge Philosophical Society.
[20] M. Nowak,et al. Stochastic Tunnels in Evolutionary Dynamics , 2004, Genetics.
[21] J. Krug,et al. Directed polymers in the presence of colununar disorder , 1993 .
[22] Claus O Wilke,et al. Quasispecies theory in the context of population genetics , 2005, BMC Evolutionary Biology.
[23] M. Eigen. Selforganization of matter and the evolution of biological macromolecules , 1971, Naturwissenschaften.
[24] H. A. Orr,et al. THE POPULATION GENETICS OF ADAPTATION: THE ADAPTATION OF DNA SEQUENCES , 2002, Evolution; international journal of organic evolution.
[25] M. Eigen,et al. The molecular quasi-species , 2007 .
[26] L. Chao,et al. Evolution by small steps and rugged landscapes in the RNA virus phi6. , 1999, Genetics.
[27] Joachim Krug,et al. Punctuated evolution for the quasispecies model , 2002, cond-mat/0202054.
[28] L. Chao,et al. Evolvability of an RNA virus is determined by its mutational neighbourhood , 2000, Nature.
[29] R. Lenski,et al. Theoretical analysis of divergence in mean fitness between initially identical populations , 1995, Proceedings of the Royal Society of London. Series B: Biological Sciences.
[30] Stuart A. Kauffman,et al. ORIGINS OF ORDER , 2019, Origins of Order.
[31] R. Lenski,et al. Dynamics of adaptation and diversification: a 10,000-generation experiment with bacterial populations. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[32] R. Lenski,et al. Microbial genetics: Evolution experiments with microorganisms: the dynamics and genetic bases of adaptation , 2003, Nature Reviews Genetics.
[33] Z. Yang,et al. Probability models for DNA sequence evolution , 2004, Heredity.
[34] R. Lenski,et al. Evidence for multiple adaptive peaks from populations of bacteria evolving in a structured habitat. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[35] R. Watson,et al. PERSPECTIVE: SIGN EPISTASIS AND GENETIC COSTRAINT ON EVOLUTIONARY TRAJECTORIES , 2005, Evolution; international journal of organic evolution.
[36] N. Barton. Fitness Landscapes and the Origin of Species , 2004 .
[37] Flyvbjerg,et al. Evolution in a rugged fitness landscape. , 1992, Physical review. A, Atomic, molecular, and optical physics.
[38] D. Sornette. Critical Phenomena in Natural Sciences: Chaos, Fractals, Selforganization and Disorder: Concepts and Tools , 2000 .
[39] J. Gillespie. MOLECULAR EVOLUTION OVER THE MUTATIONAL LANDSCAPE , 1984, Evolution; international journal of organic evolution.
[40] Flyvbjerg,et al. Coevolution in a rugged fitness landscape. , 1992, Physical review. A, Atomic, molecular, and optical physics.
[41] J. Crutchfield,et al. Metastable evolutionary dynamics: Crossing fitness barriers or escaping via neutral paths? , 1999, Bulletin of mathematical biology.
[42] Yi-Cheng Zhang. QUASISPECIES EVOLUTION OF FINITE POPULATIONS , 1997 .
[43] S. Kauffman,et al. Towards a general theory of adaptive walks on rugged landscapes. , 1987, Journal of theoretical biology.
[44] Claus O. Wilke,et al. The Speed of Adaptation in Large Asexual Populations , 2004, Genetics.
[45] A. Perelson,et al. Evolutionary walks on rugged landscapes , 1991 .
[46] A. Rodrigo,et al. Transition between Stochastic Evolution and Deterministic Evolution in the Presence of Selection: General Theory and Application to Virology , 2001, Microbiology and Molecular Biology Reviews.
[47] Joachim Krug,et al. Evolutionary trajectories in rugged fitness landscapes , 2005, q-bio/0501028.
[48] Joachim Krug,et al. Breaking records in the evolutionary race , 2004, q-bio/0409019.