Hierarchical binding of the TodT response regulator to its multiple recognition sites at the tod pathway operon promoter.
暂无分享,去创建一个
J. Ramos | T. Krell | M. Guazzaroni | J. Lacal | A. Busch
[1] J. Ramos,et al. Bacterial sensor kinase TodS interacts with agonistic and antagonistic signals , 2007, Proceedings of the National Academy of Sciences.
[2] Y. Fujita,et al. Dual Regulation of the Bacillus subtilis Regulon Comprising the lmrAB and yxaGH Operons and yxaF Gene by Two Transcriptional Repressors, LmrA and YxaF, in Response to Flavonoids , 2007, Journal of bacteriology.
[3] T. D. Schneider,et al. Anatomy of Escherichia coli σ70 promoters , 2006, Nucleic acids research.
[4] T. Mascher,et al. Stimulus Perception in Bacterial Signal-Transducing Histidine Kinases , 2006, Microbiology and Molecular Biology Reviews.
[5] Michael Y. Galperin,et al. Sentra: a database of signal transduction proteins for comparative genome analysis , 2006, Nucleic Acids Res..
[6] F. M. Hulett,et al. Cys303 in the Histidine Kinase PhoR Is Crucial for the Phosphotransfer Reaction in the PhoPR Two-Component System in Bacillus subtilis , 2006, Journal of bacteriology.
[7] R. Hakenbeck,et al. The Two-Component Regulatory System TCS08 Is Involved in Cellobiose Metabolism of Streptococcus pneumoniae R6 , 2006, Journal of bacteriology.
[8] M. Kivisaar,et al. The ColRS Two-Component System Regulates Membrane Functions and Protects Pseudomonas putida against Phenol , 2006, Journal of bacteriology.
[9] India G. Hook-Barnard,et al. Escherichia coli RNA Polymerase Recognition of a σ70-Dependent Promoter Requiring a −35 DNA Element and an Extended −10 TGn Motif , 2006, Journal of bacteriology.
[10] Arun K. Chatterjee,et al. Erwinia carotovora Subspecies Produce Duplicate Variants of ExpR, LuxR Homologs That Activate rsmA Transcription but Differ in Their Interactions with N-Acylhomoserine Lactone Signals , 2006, Journal of bacteriology.
[11] M. Inouye,et al. Transcription Regulation of ompF and ompC by a Single Transcription Factor, OmpR* , 2006, Journal of Biological Chemistry.
[12] R. Bourret. Census of Prokaryotic Senses , 2006, Journal of bacteriology.
[13] Michael Y. Galperin. Structural Classification of Bacterial Response Regulators: Diversity of Output Domains and Domain Combinations , 2006, Journal of bacteriology.
[14] Michelle D. Brazas,et al. Contribution of the PhoP-PhoQ and PmrA-PmrB Two-Component Regulatory Systems to Mg2+-Induced Gene Regulation in Pseudomonas aeruginosa , 2006, Journal of bacteriology.
[15] J. Ramos,et al. The TodS-TodT two-component regulatory system recognizes a wide range of effectors and works with DNA-bending proteins. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[16] T. Donohue,et al. Mutational analysis of the C-terminal domain of the Rhodobacter sphaeroides response regulator PrrA. , 2005, Microbiology.
[17] V. Di Stefano,et al. Dual Role of Response Regulator StyR in Styrene Catabolism Regulation , 2005, Applied and Environmental Microbiology.
[18] M. Bolognesi,et al. An active-like structure in the unphosphorylated StyR response regulator suggests a phosphorylation- dependent allosteric activation mechanism. , 2005, Structure.
[19] J. Ramos,et al. The Multidrug Efflux Regulator TtgV Recognizes a Wide Range of Structurally Different Effectors in Solution and Complexed with Target DNA , 2005, Journal of Biological Chemistry.
[20] Jan Roelof van der Meer,et al. Bacterial Transcriptional Regulators for Degradation Pathways of Aromatic Compounds , 2004, Microbiology and Molecular Biology Reviews.
[21] C. Bauer,et al. RegB/RegA, a Highly Conserved Redox-Responding Global Two-Component Regulatory System , 2004, Microbiology and Molecular Biology Reviews.
[22] M. Urbanowski,et al. The Quorum Sensing Negative Regulators EsaR and ExpREcc, Homologues within the LuxR Family, Retain the Ability To Function as Activators of Transcription , 2003, Journal of bacteriology.
[23] E. Groisman,et al. Making informed decisions: regulatory interactions between two-component systems. , 2003, Trends in microbiology.
[24] J. Ramos,et al. Comparative genomic analysis of solvent extrusion pumps in Pseudomonas strains exhibiting different degrees of solvent tolerance , 2003, Extremophiles.
[25] P. Ascenzi,et al. Styrene-catabolism regulation in Pseudomonas fluorescens ST: phosphorylation of StyR induces dimerization and cooperative DNA-binding. , 2003, Biochemical and biophysical research communications.
[26] C. Birck,et al. The Crystal Structure of the Phosphorylation Domain in PhoP Reveals a Functional Tandem Association Mediated by an Asymmetric Interface , 2003, Journal of bacteriology.
[27] L. Kenney,et al. Interdomain Linkers of Homologous Response Regulators Determine Their Mechanism of Action , 2003, Journal of bacteriology.
[28] J. Ramos,et al. Cross-Regulation between a Novel Two-Component Signal Transduction System for Catabolism of Toluene in Pseudomonas mendocina and the TodST System from Pseudomonas putida , 2002, Journal of bacteriology.
[29] Gary Parkinson,et al. Structural Basis of Transcription Activation: The CAP-αCTD-DNA Complex , 2002, Science.
[30] M. Solà,et al. Tandem DNA recognition by PhoB, a two-component signal transduction transcriptional activator. , 2002, Structure.
[31] M J Todd,et al. Enzyme kinetics determined using calorimetry: a general assay for enzyme activity? , 2001, Analytical biochemistry.
[32] J. Ramos,et al. Responses of Gram-negative bacteria to certain environmental stressors. , 2001, Current opinion in microbiology.
[33] J. Sambrook,et al. Molecular Cloning: A Laboratory Manual , 2001 .
[34] Brian F. Volkman,et al. Structure of a transiently phosphorylated switch in bacterial signal transduction , 2000, Nature.
[35] R. Ebright,et al. Transcription activation by catabolite activator protein (CAP). , 1999, Journal of molecular biology.
[36] J. Ramos,et al. Toluene metabolism by the solvent-tolerant Pseudomonas putida DOT-T1 strain, and its role in solvent impermeabilization. , 1999, Gene.
[37] J. Houghton,et al. PcaR‐mediated activation and repression of pca genes from Pseudomonas putida are propagated by its binding to both the −35 and the −10 promoter elements , 1999, Molecular microbiology.
[38] J. Ramos,et al. Critical Nucleotides in the Upstream Region of the XylS-dependent TOL meta-Cleavage Pathway Operon Promoter as Deduced from Analysis of Mutants* , 1999, The Journal of Biological Chemistry.
[39] R. Ebright,et al. Orientation of OmpR monomers within an OmpR:DNA complex determined by DNA affinity cleaving. , 1999, Journal of molecular biology.
[40] M. Inouye,et al. Hierarchical and co‐operative binding of OmpR to a fusion construct containing the ompC and ompF upstream regulatory sequences of Escherichia coli , 1998, Genes to cells : devoted to molecular & cellular mechanisms.
[41] S. Busby,et al. Positive activation of gene expression. , 1998, Current opinion in microbiology.
[42] A. Segura,et al. PcaU, a Transcriptional Activator of Genes for Protocatechuate Utilization in Acinetobacter , 1998, Journal of bacteriology.
[43] S. Busby,et al. Region 2.5 of the Escherichia coli RNA polymerase σ70 subunit is responsible for the recognition of the ‘extended −10’ motif at promoters , 1997, The EMBO journal.
[44] R Brousseau,et al. A bacterial basic region leucine zipper histidine kinase regulating toluene degradation. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[45] Phoebe A Rice,et al. Crystal Structure of an IHF-DNA Complex: A Protein-Induced DNA U-Turn , 1996, Cell.
[46] M. Inouye,et al. Tandem Binding of Six OmpR Proteins to the ompF Upstream Regulatory Sequence of Escherichia coli(*) , 1995, The Journal of Biological Chemistry.
[47] J. Ramos,et al. Isolation and expansion of the catabolic potential of a Pseudomonas putida strain able to grow in the presence of high concentrations of aromatic hydrocarbons , 1995, Journal of bacteriology.
[48] A. Kumar,et al. The minus 35-recognition region of Escherichia coli sigma 70 is inessential for initiation of transcription at an "extended minus 10" promoter. , 1993, Journal of molecular biology.
[49] J. Collado-Vides,et al. Control site location and transcriptional regulation in Escherichia coli. , 1991, Microbiological reviews.
[50] D. Gibson,et al. Toluene degradation by Pseudomonas putida F1. Nucleotide sequence of the todC1C2BADE genes and their expression in Escherichia coli. , 1989, The Journal of biological chemistry.
[51] T. Mizuno,et al. Phosphorylation of a bacterial activator protein, OmpR, by a protein kinase, EnvZ, results in stimulation of its DNA-binding ability. , 1989, Journal of biochemistry.
[52] E. Raleigh,et al. Genetic and physical mapping of the mcrA (rglA) and mcrB (rglB) loci of Escherichia coli K-12. , 1989, Genetics.
[53] J F Brandts,et al. Rapid measurement of binding constants and heats of binding using a new titration calorimeter. , 1989, Analytical biochemistry.
[54] M. Rosenberg,et al. Constitutive function of a positively regulated promoter reveals new sequences essential for activity. , 1987, The Journal of biological chemistry.
[55] F. Ausubel,et al. Two-component regulatory systems responsive to environmental stimuli share strongly conserved domains with the nitrogen assimilation regulatory genes ntrB and ntrC. , 1986, Proceedings of the National Academy of Sciences of the United States of America.
[56] D. K. Hawley,et al. Compilation and analysis of Escherichia coli promoter DNA sequences. , 1983, Nucleic acids research.
[57] E. Zennaro,et al. Styrene, an Unpalatable Substrate with Complex Regulatory Networks , 2007 .
[58] Herman P. Spaink,et al. Promoters in the nodulation region of the Rhizobium leguminosarum Sym plasmid pRL1JI , 2004, Plant Molecular Biology.
[59] A. Filloux,et al. Two-Component Signal Transduction Systems: A Key to the Adaptative Potential of Pseudomonas Aeruginosa , 2004 .
[60] Michael R. Sawaya,et al. Dimerization allows DNA target site recognition by the NarL response regulator , 2002, Nature Structural Biology.
[61] Ann M Stock,et al. Two-component signal transduction. , 2000, Annual review of biochemistry.
[62] D. Kahn,et al. Conformational changes induced by phosphorylation of the FixJ receiver domain. , 1999, Structure.
[63] V. de Lorenzo,et al. Clues and consequences of DNA bending in transcription. , 1997, Annual review of microbiology.
[64] F. Studier,et al. Use of T7 RNA polymerase to direct expression of cloned genes. , 1990, Methods in enzymology.
[65] P. Hagerman. Flexibility of DNA. , 1988, Annual review of biophysics and biophysical chemistry.