Analysis of Linked Human ɛ and γ Transgenes: Effect of Locus Control Region Hypersensitive Sites 2 and 3 or a Distal YY1 Mutation on Stage-Specific Expression Patterns

Stage-specific expression of the human β-like globin genes is controlled by interactions between regulatory elements near the individual genes and additional elements located upstream in the Locus Control Region (LCR). Elucidation of the mechanisms that govern these interactions could suggest strategies to reactivate fetal (γ) or embryonic (ɛ) genes in individuals with severe hemoglobinopathies. This study extends an earlier analysis of a transgenic construct, HS3ɛγ, testing: (A) the effect of substitution of HS2 for HS3 on stage-specific expression of the ɛ and γ genes and, (B) the role of an evolutionarily conserved YY1 binding site in transcriptional regulation of the γ gene. The data show that both HS3ɛγ and HS2ɛγ can individually support embryonic expression of ɛ and fetal expression of Aγ. Thus, the cis regulators of distinct expression patterns for ɛ and γ are likely to reside near the genes, rather than in specific hypersensitive sites of the LCR. Alterations in Aγ expression patterns observed in transgenic lines carrying a construct with a mutation in a conserved YY1 binding site at −1086 indicate that this site might function to facilitate active transcription of the γ gene in fetal life.

[1]  Michael E. Bradley,et al.  Influence of promoter potency on the transcriptional effects of YY1, SRF and Msx-1 in transient transfection analysis , 1998, Nucleic Acids Res..

[2]  Wen‐Ming Yang,et al.  Transcriptional repression by YY1 is mediated by interaction with a mammalian homolog of the yeast global regulator RPD3. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[3]  A. Carè,et al.  Haemoglobin switching in human embryos: asynchrony of ζ → α and ε → γ-globin switches in primitive and definitive erythropoietic lineage , 1985, Nature.

[4]  M. Grunstein Histone acetylation in chromatin structure and transcription , 1997, Nature.

[5]  T A Gray,et al.  Phylogenetic footprinting reveals a nuclear protein which binds to silencer sequences in the human gamma and epsilon globin genes , 1992, Molecular and cellular biology.

[6]  M. Atchison,et al.  Identification of YY1 sequences necessary for association with the nuclear matrix and for transcriptional repression functions , 1998, Journal of cellular biochemistry.

[7]  M. Goodman,et al.  High affinity YY1 binding motifs: identification of two core types (ACAT and CCAT) and distribution of potential binding sites within the human beta globin cluster. , 1995, Nucleic acids research.

[8]  V. Pirrotta,et al.  Polycombing the Genome: PcG, trxG, and Chromatin Silencing , 1998, Cell.

[9]  P. Witt Everything you ever wanted to know about . . . , 1998 .

[10]  J. Nickoloff,et al.  Site-directed mutagenesis of virtually any plasmid by eliminating a unique site. , 1992, Analytical biochemistry.

[11]  T. Ley,et al.  An enhancer element lies 3′ to the human A gamma globin gene. , 1987, The EMBO journal.

[12]  F. Grosveld,et al.  Each hypersensitive site of the human beta-globin locus control region confers a different developmental pattern of expression on the globin genes. , 1993, Genes & development.

[13]  P. Navas,et al.  Developmental Specificity of the Interaction between the Locus Control Region and Embryonic or Fetal Globin Genes in Transgenic Mice with an HS3 Core Deletion , 1998, Molecular and Cellular Biology.

[14]  J. Stamatoyannopoulos,et al.  Sheltering of gamma-globin expression from position effects requires both an upstream locus control region and a regulatory element 3' to the A gamma-globin gene , 1997, Molecular and cellular biology.

[15]  I. Herr,et al.  A switch region determines the cell type-specific positive or negative action of YY1 on the activity of the human papillomavirus type 18 promoter , 1995, Journal of virology.

[16]  J. D. Engel,et al.  Synergistic regulation of human beta-globin gene switching by locus control region elements HS3 and HS4. , 1995, Genes & development.

[17]  M. Roque,et al.  A developmentally modulated chromatin structure at the mouse immunoglobulin kappa 3' enhancer , 1996, Molecular and cellular biology.

[18]  J. Strouboulis,et al.  The effect of distance on long-range chromatin interactions. , 1997, Molecular cell.

[19]  T. Maniatis,et al.  Rapid reprogramming of globin gene expression in transient heterokaryons , 1986, Cell.

[20]  T. Ley,et al.  Analysis of mice containing a targeted deletion of beta-globin locus control region 5' hypersensitive site 3 , 1996, Molecular and cellular biology.

[21]  H. Ashe,et al.  Intergenic transcription and transinduction of the human beta-globin locus. , 1997, Genes & development.

[22]  T. Kimbrough,et al.  Effect of deletion of 5'HS3 or 5'HS2 of the human beta-globin locus control region on the developmental regulation of globin gene expression in beta-globin locus yeast artificial chromosome transgenic mice. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[23]  Peter Fraser,et al.  Transcription complex stability and chromatin dynamics in vivo , 1995, Nature.

[24]  M. Whiteley,et al.  The Drosophila Polycomb group gene pleiohomeotic encodes a DNA binding protein with homology to the transcription factor YY1. , 1998, Molecular cell.

[25]  J. Stamatoyannopoulos,et al.  Position independence and proper developmental control of gamma-globin gene expression require both a 5' locus control region and a downstream sequence element , 1994, Molecular and cellular biology.

[26]  G. Stamatoyannopoulos,et al.  Developmental regulation of human gamma-globin genes in transgenic mice , 1993, Molecular and cellular biology.

[27]  M. Gilman,et al.  DNA bending and orientation-dependent function of YY1 in the c-fos promoter. , 1993, Genes & development.

[28]  T. Ley,et al.  Globin gene expression in erythroid human fetal liver cells. , 1989, The Journal of clinical investigation.

[29]  G. Felsenfeld,et al.  Chromatin structure and gene expression. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[30]  J. Strouboulis,et al.  Heterochromatin Effects on the Frequency and Duration of LCR-Mediated Gene Transcription , 1996, Cell.

[31]  M. Goodman,et al.  Evolution of a Fetal Expression Pattern via cisChanges near the γ Globin Gene* , 1997, The Journal of Biological Chemistry.

[32]  F. Grosveld,et al.  The Dynamics of Globin Gene Expression and Gene Therapy Vectors , 1998, Annals of the New York Academy of Sciences.

[33]  D. Tuan,et al.  Transcription of the hypersensitive site HS2 enhancer in erythroid cells. , 1992, Proceedings of the National Academy of Sciences of the United States of America.

[34]  Ya-Li Yao,et al.  Isolation and Characterization of cDNAs Corresponding to an Additional Member of the Human Histone Deacetylase Gene Family* , 1997, The Journal of Biological Chemistry.

[35]  D. Scalzo,et al.  Transcriptional enhancers act in cis to suppress position-effect variegation. , 1996, Genes & development.

[36]  Jeng-Shin Lee,et al.  Everything you have ever wanted to know about Yin Yang 1...... , 1997, Biochimica et biophysica acta.

[37]  E. Moran,et al.  Relief of YY1 transcriptional repression by adenovirus E1A is mediated by E1A-associated protein p300. , 1995, Genes & development.

[38]  M. Atchison,et al.  Isolation of a candidate repressor/activator, NF-E1 (YY-1, delta), that binds to the immunoglobulin kappa 3' enhancer and the immunoglobulin heavy-chain mu E1 site. , 1991, Proceedings of the National Academy of Sciences of the United States of America.

[39]  B. Howard,et al.  The Transcriptional Coactivators p300 and CBP Are Histone Acetyltransferases , 1996, Cell.

[40]  J. Strouboulis,et al.  Developmental regulation of a complete 70-kb human beta-globin locus in transgenic mice. , 1992, Genes & development.

[41]  M. Groudine,et al.  Regulation of β-globin gene expression: straightening out the locus , 1996 .

[42]  G. Stamatoyannopoulos,et al.  Transgenic mice containing a 248-kilobase human beta locus yeast artificial chromosome display proper developmental control of human globin genes. , 1993, Transactions of the Association of American Physicians.

[43]  S. Weissman,et al.  Developmental regulation of human gamma- and beta-globin genes in the absence of the locus control region , 1994 .