CT slice localization via instance-based regression

Automatically determining the relative position of a single CT slice within a full body scan provides several useful functionalities. For example, it is possible to validate DICOM meta-data information. Furthermore, knowing the relative position in a scan allows the efficient retrieval of similar slices from the same body region in other volume scans. Finally, the relative position is often an important information for a non-expert user having only access to a single CT slice of a scan. In this paper, we determine the relative position of single CT slices via instance-based regression without using any meta data. Each slice of a volume set is represented by several types of feature information that is computed from a sequence of image conversions and edge detection routines on rectangular subregions of the slices. Our new method is independent from the settings of the CT scanner and provides an average localization error of less than 4.5 cm using leave-one-out validation on a dataset of 34 annotated volume scans. Thus, we demonstrate that instance-based regression is a suitable tool for mapping single slices to a standardized coordinate system and that our algorithm is competitive to other volume-based approaches with respect to runtime and prediction quality, even though only a fraction of the input information is required in comparison to other approaches.

[1]  Pietro Perona,et al.  Learning Generative Visual Models from Few Training Examples: An Incremental Bayesian Approach Tested on 101 Object Categories , 2004, 2004 Conference on Computer Vision and Pattern Recognition Workshop.

[2]  Robert M. Haralick,et al.  Textural Features for Image Classification , 1973, IEEE Trans. Syst. Man Cybern..

[3]  Dorin Comaniciu,et al.  Hierarchical parsing and semantic navigation of full body CT data , 2009, Medical Imaging.

[4]  Thomas Martin Deserno,et al.  A Distributed Architecture for Content-Based Image Retrieval in Medical Applications , 2002, PRIS.

[5]  B Haas,et al.  Automatic segmentation of thoracic and pelvic CT images for radiotherapy planning using implicit anatomic knowledge and organ-specific segmentation strategies , 2008, Physics in medicine and biology.

[6]  Hans-Peter Kriegel,et al.  The X-tree : An Index Structure for High-Dimensional Data , 2001, VLDB.

[7]  Dorin Comaniciu,et al.  Estimating the body portion of CT volumes by matching histograms of visual words , 2009, Medical Imaging.

[8]  Andrew Zisserman,et al.  Representing shape with a spatial pyramid kernel , 2007, CIVR '07.

[9]  Cordelia Schmid,et al.  A Performance Evaluation of Local Descriptors , 2005, IEEE Trans. Pattern Anal. Mach. Intell..

[10]  John F. Canny,et al.  A Computational Approach to Edge Detection , 1986, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[11]  Cordelia Schmid,et al.  Beyond Bags of Features: Spatial Pyramid Matching for Recognizing Natural Scene Categories , 2006, 2006 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'06).