The SR protein family: pleiotropic functions in pre-mRNA splicing.

A family of proteins with arginine-serine-rich domains has recently come into the limelight of studies on the mechanisms of constitutive and regulated pre-mRNA splicing. Implicated in an ever increasing variety of functions, these proteins act as driving forces during spliceosome assembly and also play decisive roles in alternative splice-site selection, suggesting that they are crucial players in the regulation of splicing during cell differentiation and development.

[1]  Koji Kariya-city Aichi-pref. Tanaka,et al.  Polypurine sequences within a downstream exon function as a splicing enhancer , 1994, Molecular and cellular biology.

[2]  J. Manley,et al.  Functional domains of the human splicing factor ASF/SF2. , 1993, The EMBO journal.

[3]  T. Maniatis,et al.  Isolation of a complementary DNA that encodes the mammalian splicing factor SC35. , 1992, Science.

[4]  E. Birney,et al.  Analysis of the RNA-recognition motif and RS and RGG domains: conservation in metazoan pre-mRNA splicing factors. , 1993, Nucleic acids research.

[5]  M. Garcia-Blanco,et al.  Protein–protein interactions and 5'-splice-site recognition in mammalian mRNA precursors , 1994, Nature.

[6]  P. Sharp,et al.  A U6 snRNA:pre-mRNA interaction can be rate-limiting for U1-independent splicing. , 1995, Genes & development.

[7]  J. Lis,et al.  The SR protein B52/SRp55 is essential for Drosophila development , 1994, Molecular and cellular biology.

[8]  A. Zahler,et al.  Distinct functions of SR proteins in recruitment of U1 small nuclear ribonucleoprotein to alternative 5' splice sites. , 1995, Proceedings of the National Academy of Sciences of the United States of America.

[9]  M. Green,et al.  Biochemical characterization of U2 snRNP auxiliary factor: an essential pre‐mRNA splicing factor with a novel intranuclear distribution. , 1991, The EMBO journal.

[10]  M B Roth,et al.  SR proteins: a conserved family of pre-mRNA splicing factors. , 1992, Genes & development.

[11]  Xiang-Dong Fu Specific commitment of different pre-mRNAs to splicing by single SR proteins , 1993, Nature.

[12]  J. Lis,et al.  The concentration of B52, an essential splicing factor and regulator of splice site choice in vitro, is critical for Drosophila development , 1994, Molecular and cellular biology.

[13]  J. Manley,et al.  A protein factor, ASF, controls cell-specific alternative splicing of SV40 early pre-mRNA in vitro , 1990, Cell.

[14]  M. Roth,et al.  A conserved epitope on a subset of SR proteins defines a larger family of Pre-mRNA splicing factors , 1995, The Journal of cell biology.

[15]  J. Steitz,et al.  Modulation of 5' splice site choice in pre-messenger RNA by two distinct steps. , 1995, Proceedings of the National Academy of Sciences of the United States of America.

[16]  J. Tazi,et al.  Thiophosphorylation of U1-70K protein inhibits pre-mRNA splicing , 1993, Nature.

[17]  A. Krainer,et al.  Identification and characterization of three members of the human SR family of pre‐mRNA splicing factors. , 1995, The EMBO journal.

[18]  J. E. Mermoud,et al.  Regulation of mammalian spliceosome assembly by a protein phosphorylation mechanism. , 1994, The EMBO journal.

[19]  T. Maniatis,et al.  A splicing enhancer complex controls alternative splicing of doublesex pre-mRNA , 1993, Cell.

[20]  P. Cohen,et al.  Ser/Thr-specific protein phosphatases are required for both catalytic steps of pre-mRNA splicing. , 1992, Nucleic acids research.

[21]  A. Zahler,et al.  A subset of SR proteins activates splicing of the cardiac troponin T alternative exon by direct interactions with an exonic enhancer , 1995, Molecular and cellular biology.

[22]  A. Krainer,et al.  General splicing factor SF2/ASF promotes alternative splicing by binding to an exonic splicing enhancer. , 1993, Genes & development.

[23]  J. Manley,et al.  Overexpression of the SR proteins ASF/SF2 and SC35 influences alternative splicing in vivo in diverse ways. , 1995, RNA.

[24]  P. Zamore,et al.  RNA annealing activity is intrinsically associated with U2AF. , 1993, The Journal of biological chemistry.

[25]  M B Roth,et al.  A conserved family of nuclear phosphoproteins localized to sites of polymerase II transcription , 1991, The Journal of cell biology.

[26]  J. Manley,et al.  The human splicing factors ASF/SF2 and SC35 possess distinct, functionally significant RNA binding specificities. , 1995, The EMBO journal.

[27]  A. Kornblihtt,et al.  A splicing enhancer in the human fibronectin alternate ED1 exon interacts with SR proteins and stimulates U2 snRNP binding. , 1993, Genes & development.

[28]  P. Bingham,et al.  Arginine/serine-rich domains of the su(wa) and tra RNA processing regulators target proteins to a subnuclear compartment implicated in splicing , 1991, Cell.

[29]  Xiang-Dong Fu,et al.  The superfamily of arginine/serine-rich splicing factors. , 1995, RNA.

[30]  Stephen M. Mount,et al.  Genetic enhancement of RNA-processing defects by a dominant mutation in B52, the Drosophila gene for an SR protein splicing factor , 1995, Molecular and cellular biology.

[31]  B. S. Baker,et al.  The Drosophila RNA-binding protein RBP1 is localized to transcriptionally active sites of chromosomes and shows a functional similarity to human splicing factor ASF/SF2. , 1992, Genes & development.

[32]  J. Manley,et al.  The human splicing factor ASF/SF2 can specifically recognize pre-mRNA 5' splice sites. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[33]  A. Krainer,et al.  Functional analysis of pre‐mRNA splicing factor SF2/ASF structural domains. , 1993, The EMBO journal.

[34]  Adrian R. Krainer,et al.  Regulation of alternative pre-mRNA splicing by hnRNP A1 and splicing factor SF2 , 1992, Cell.

[35]  Tom Maniatis,et al.  Specific interactions between proteins implicated in splice site selection and regulated alternative splicing , 1993, Cell.

[36]  P. Grabowski,et al.  U1 snRNP targets an essential splicing factor, U2AF65, to the 3' splice site by a network of interactions spanning the exon. , 1992, Genes & development.

[37]  J. Steitz,et al.  SR proteins can compensate for the loss of U1 snRNP functions in vitro. , 1994, Genes & development.

[38]  M. Garcia-Blanco,et al.  SR proteins escort the U4/U6.U5 tri-snRNP to the spliceosome. , 1995, RNA.

[39]  Y. Shimura,et al.  The role of exon sequences in splice site selection. , 1993, Genes & development.

[40]  A. Krainer,et al.  Regulation of alternative splicing in vivo by overexpression of antagonistic splicing factors. , 1994, Science.

[41]  J. Steitz,et al.  A base-pairing interaction between U2 and U6 small nuclear RNAs occurs in > 150S complexes in HeLa cell extracts: implications for the spliceosome assembly pathway. , 1993, Proceedings of the National Academy of Sciences of the United States of America.

[42]  A. Krainer,et al.  Pathways for selection of 5′ splice sites by U1 snRNPs and SF2/ASF. , 1993, The EMBO journal.

[43]  M. Garcia-Blanco,et al.  U1 snRNP-ASF/SF2 interaction and 5' splice site recognition: characterization of required elements. , 1995, Nucleic acids research.

[44]  T. Maniatis,et al.  A splicing enhancer exhibits both constitutive and regulated activities. , 1994, Genes & development.

[45]  P. Sharp,et al.  Complementation by SR proteins of pre-mRNA splicing reactions depleted of U1 snRNP. , 1994, Science.

[46]  A. Zahler,et al.  Distinct functions of SR proteins in alternative pre-mRNA splicing. , 1993, Science.

[47]  A. Krainer,et al.  Functional expression of cloned human splicing factor SF2: homology to rna-binding proteins, U1 70K, and drosophila splicing regulators , 1991, Cell.