Estimation of connectional brain templates using selective multi-view network normalization

The brain connectome encodes different facets of the brain construct such as function and structure in a network. Noting that a brain network captures the individual signature of a particular subject, it remains a formidable challenge to extract a shared and representative brain signature across a population of brain networks, let alone multi-view brain networks. In this paper, we propose netNorm, a method that can meet this challenge by normalizing a population of multi-view brain networks, where each brain network represents a particular view of the brain, acquired using a neuroimaging technique. While conventional methods integrate the network views equally at a global scale, we propose a selective technique which unfolds the fusion process at a local scale by first selecting for each local pairwise connectivity between two anatomical regions of interest the most representative cross-view feature vector in the population. By combining the selected cross-view feature vectors, we then estimate a population representative tensor. Such multi-view representation captures the most shared traits across all subjects and thereby occupies a centered location compared to all views. In the final step, netNorm non-linearly fuses the frontal views of the estimated representative population tensor into a single network depicting the final brain connectional template. We demonstrate the broad applicability of our method on four connectomic datasets and we show that netNorm (i) produces the most centered and representative connectional brain template (CBT) that consistently captures the unique and distinctive traits of a population of multi-view brain networks, and (ii) identifies disordered brain connections by comparing templates estimated using disordered and healthy brains, respectively, demonstrating the discriminative power of the estimated CBTs. This allows to rapidly and efficiently spot atypical deviations from the normal brain connectome for comparative studies, circumventing the need to use machine learning techniques for discriminative feature identification.

[1]  Shanshan Hong,et al.  Voxel-based morphometry study on brain structure in children with high-functioning autism , 2008, Neuroreport.

[2]  Dinggang Shen,et al.  SharpMean: Groupwise registration guided by sharp mean image and tree-based registration , 2011, NeuroImage.

[3]  A. Dale,et al.  Alzheimer disease: quantitative structural neuroimaging for detection and prediction of clinical and structural changes in mild cognitive impairment. , 2009, Radiology.

[4]  Peter B. Jones,et al.  Morphometric Similarity Networks Detect Microscale Cortical Organization and Predict Inter-Individual Cognitive Variation , 2017, Neuron.

[5]  Zhuowen Tu,et al.  Similarity network fusion for aggregating data types on a genomic scale , 2014, Nature Methods.

[6]  Christoph Schmitz,et al.  Neurons in the fusiform gyrus are fewer and smaller in autism. , 2008, Brain : a journal of neurology.

[7]  David I. Perrett,et al.  A voxel-based investigation of brain structure in male adolescents with autistic spectrum disorder , 2004, NeuroImage.

[8]  Anders M. Dale,et al.  An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest , 2006, NeuroImage.

[9]  R. Mayeux,et al.  Hippocampal and entorhinal atrophy in mild cognitive impairment , 2007, Neurology.

[10]  Vikas Singh,et al.  Predictive markers for AD in a multi-modality framework: An analysis of MCI progression in the ADNI population , 2011, NeuroImage.

[11]  Islem Rekik,et al.  Joint Pairing and Structured Mapping of Convolutional Brain Morphological Multiplexes for Early Dementia Diagnosis , 2019, Brain Connect..

[12]  T. Paus,et al.  Studying neuroanatomy using MRI , 2017, Nature Neuroscience.

[13]  J A Wada,et al.  Cerebral hemispheric asymmetry in humans. Cortical speech zones in 100 adults and 100 infant brains. , 1975, Archives of neurology.

[14]  Nicholas Lange,et al.  Longitudinal changes in cortical thickness in autism and typical development. , 2014, Brain : a journal of neurology.

[15]  M. J. Leon,et al.  Longitudinal CSF isoprostane and MRI atrophy in the progression to AD , 2007, Journal of Neurology.

[16]  Josephine Barnes,et al.  Early-onset Alzheimer disease clinical variants , 2012, Neurology.

[17]  Bruce R. Rosen,et al.  Brain Genomics Superstruct Project initial data release with structural, functional, and behavioral measures , 2015, Scientific Data.

[18]  P. A. Armitage,et al.  Development and initial testing of normal reference MR images for the brain at ages 65–70 and 75–80 years , 2008, European Radiology.

[19]  Joanna M. Wardlaw,et al.  Whole Brain Magnetic Resonance Image Atlases: A Systematic Review of Existing Atlases and Caveats for Use in Population Imaging , 2017, Front. Neuroinform..

[20]  Daoqiang Zhang,et al.  Multimodal classification of Alzheimer's disease and mild cognitive impairment , 2011, NeuroImage.

[21]  Thomas Wisniewski,et al.  The neuropathology of autism: defects of neurogenesis and neuronal migration, and dysplastic changes , 2010, Acta Neuropathologica.

[22]  Amity E. Green,et al.  3D PIB and CSF biomarker associations with hippocampal atrophy in ADNI subjects , 2010, Neurobiology of Aging.

[23]  Liang Chen,et al.  Nonlinear Graph Fusion for Multi-modal Classification of Alzheimer's Disease , 2015, MLMI.

[24]  Matcheri S. Keshavan,et al.  A Preliminary Longitudinal Magnetic Resonance Imaging Study of Brain Volume and Cortical Thickness in Autism , 2009, Biological Psychiatry.

[25]  Margot J. Taylor,et al.  The Effect of Diagnosis, Age, and Symptom Severity on Cortical Surface Area in the Cingulate Cortex and Insula in Autism Spectrum Disorders , 2013, Journal of child neurology.

[26]  V S Caviness,et al.  Brain asymmetries in autism and developmental language disorder: a nested whole-brain analysis. , 2004, Brain : a journal of neurology.

[27]  John Rickert,et al.  The Fromm-Marcuse debate revisited , 1986 .

[28]  D. V. Essen,et al.  A tension-based theory of morphogenesis and compact wiring in the central nervous system , 1997, Nature.

[29]  Islem Rekik,et al.  Brain multiplexes reveal morphological connectional biomarkers fingerprinting late brain dementia states , 2018, Scientific Reports.

[30]  Dinggang Shen,et al.  Estimation of Brain Network Atlases Using Diffusive-Shrinking Graphs: Application to Developing Brains , 2017, IPMI.

[31]  D. Shen,et al.  Prediction of Alzheimer's Disease and Mild Cognitive Impairment Using Cortical Morphological Patterns Chong-yaw Wee, Pew-thian Yap, and Dinggang Shen; for the Alzheimer's Disease Neuroimaging Initiative , 2022 .

[32]  Dinggang Shen,et al.  Hierarchical multi-atlas label fusion with multi-scale feature representation and label-specific patch partition , 2015, NeuroImage.

[33]  David A. Ziegler,et al.  Language‐association cortex asymmetry in autism and specific language impairment , 2004, Annals of neurology.

[34]  Osamu Abe,et al.  Reduced Gray Matter Volume of Pars Opercularis Is Associated with Impaired Social Communication in High-Functioning Autism Spectrum Disorders , 2010, Biological Psychiatry.

[35]  Nikos Makris,et al.  Automatically parcellating the human cerebral cortex. , 2004, Cerebral cortex.

[36]  Islem Rekik,et al.  Unsupervised Manifold Learning Using High-Order Morphological Brain Networks Derived From T1-w MRI for Autism Diagnosis , 2018, Front. Neuroinform..

[37]  Alex Martin,et al.  Age-related temporal and parietal cortical thinning in autism spectrum disorders. , 2010, Brain : a journal of neurology.

[38]  C. Jack,et al.  Alzheimer's Disease Neuroimaging Initiative , 2008 .

[39]  Islem Rekik,et al.  Clustering-based multi-view network fusion for estimating brain network atlases of healthy and disordered populations , 2019, Journal of Neuroscience Methods.

[40]  Daniel P. Kennedy,et al.  The Autism Brain Imaging Data Exchange: Towards Large-Scale Evaluation of the Intrinsic Brain Architecture in Autism , 2013, Molecular Psychiatry.

[41]  Jesper Andersson,et al.  A multi-modal parcellation of human cerebral cortex , 2016, Nature.

[42]  M. Leboyer,et al.  SPECT OF THE BRAIN IN CHILDHOOD AUTISM: EVIDENCE FOR A LACK OF NORMAL HEMISPHERIC ASYMMETRY , 1995, Developmental medicine and child neurology.

[43]  Paul M. Thompson,et al.  Multi-source feature learning for joint analysis of incomplete multiple heterogeneous neuroimaging data , 2012, NeuroImage.

[44]  Timothy E. J. Behrens,et al.  Measuring macroscopic brain connections in vivo , 2015, Nature Neuroscience.

[45]  Islem Rekik,et al.  Cooperative Correlational and Discriminative Ensemble Classifier Learning for Early Dementia Diagnosis Using Morphological Brain Multiplexes , 2018, IEEE Access.

[46]  Dinggang Shen,et al.  Neurodegenerative disease diagnosis using incomplete multi-modality data via matrix shrinkage and completion , 2014, NeuroImage.

[47]  Karl J. Friston,et al.  Structural and Functional Brain Networks: From Connections to Cognition , 2013, Science.