Analysis of B-cell receptor repertoires in COVID-19 patients using deep embedded representations of protein sequences
暂无分享,去创建一个
Junho Chung | Jinsung Noh | Inyoung Kim | Sang Yoon Byun | Sangyeup Kim | Sangyoon Choi | Byung Gee Kim | Junho Chung | Inyoung Kim | Jinsung Noh | B. Kim | Sangyeup Kim | S. Choi
[1] D. Pardoll,et al. DeepTCR is a deep learning framework for revealing sequence concepts within T-cell repertoires , 2021, Nature Communications.
[2] Michiaki Hamada,et al. Representation learning applications in biological sequence analysis , 2021, bioRxiv.
[3] William S. DeWitt,et al. Dynamics of B cell repertoires and emergence of cross-reactive responses in patients with different severities of COVID-19 , 2021, Cell Reports.
[4] P. Lyons,et al. B cell receptor repertoire analysis in six immune-mediated diseases , 2019, Nature.
[5] Michiaki Hamada,et al. Representation learning applications in biological sequence analysis , 2021, Computational and structural biotechnology journal.
[6] Y. Kluger,et al. Alignment free identification of clones in B cell receptor repertoires , 2020, bioRxiv.
[7] C. Deane,et al. Deep Sequencing of B Cell Receptor Repertoires From COVID-19 Patients Reveals Strong Convergent Immune Signatures , 2020, bioRxiv.
[8] M. Addo,et al. Next-Generation Sequencing of T and B Cell Receptor Repertoires from COVID-19 Patients Showed Signatures Associated with Severity of Disease , 2020, Immunity.
[9] C. Deane,et al. Observed Antibody Space: A Resource for Data Mining Next-Generation Sequencing of Antibody Repertoires , 2018, The Journal of Immunology.
[10] Jeffrey Dean,et al. Efficient Estimation of Word Representations in Vector Space , 2013, ICLR.
[11] Alignment free identification of clones in B cell receptor repertoires , 2020, Nucleic acids research.
[12] Mark M. Davis,et al. Analyzing the M. tuberculosis immune response by T cell receptor clustering with GLIPH2 and genome-wide antigen screening , 2020, Nature Biotechnology.
[13] Samuel E. Jones,et al. Genetic determinants of daytime napping and effects on cardiometabolic health , 2020, Nature Communications.
[14] C. Deane,et al. Structural diversity of B-cell receptor repertoires along the B-cell differentiation axis in humans and mice , 2020, PLoS computational biology.
[15] M. Seong,et al. Stereotypic neutralizing VH antibodies against SARS-CoV-2 spike protein receptor binding domain in patients with COVID-19 and healthy individuals , 2021, Science Translational Medicine.
[16] Ehsaneddin Asgari,et al. ProtVec: A Continuous Distributed Representation of Biological Sequences , 2015, ArXiv.