Global Analysis of the Transcriptional Response of Whitefly to Tomato Yellow Leaf Curl China Virus Reveals the Relationship of Coevolved Adaptations

ABSTRACT The begomoviruses are the largest and most economically important group of plant viruses transmitted exclusively by the whitefly Bemisia tabaci in a circulative, persistent manner. The circulation of the viruses within the insect vectors involves complex interactions between virus and vector components; however, the molecular mechanisms of these interactions remain largely unknown. Here we investigated the transcriptional response of the invasive B. tabaci Middle East-Asia Minor 1 species to Tomato yellow leaf curl China virus (TYLCCNV) using Illumina sequencing technology. Results showed that 1,606 genes involved in 157 biochemical pathways were differentially expressed in the viruliferous whiteflies. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis indicated that TYLCCNV can perturb the cell cycle and primary metabolism in the whitefly, which explains the negative effect of this virus on the longevity and fecundity of B. tabaci. Our data also demonstrated that TYLCCNV can activate whitefly immune responses, such as autophagy and antimicrobial peptide production, which might lead to a gradual decrease of viral particles within the body of the viruliferous whitefly. Furthermore, PCR results showed that TYLCCNV can invade the ovary and fat body tissues of the whitefly, and Lysotracker and Western blot analyses revealed that the invasion of TYLCCNV induced autophagy in both the ovary and fat body tissues. Surprisingly, TYLCCNV also suppressed the whitefly immune responses by downregulating the expression of genes involved in Toll-like signaling and mitogen-activated protein kinase (MAPK) pathways. Taken together, these results reveal the relationship of coevolved adaptations between begomoviruses and whiteflies and will provide a road map for future investigations into the complex interactions between plant viruses and their insect vectors.

[1]  Baoli Qiu,et al.  The presence of six cryptic species of the whitefly Bemisia tabaci complex in China as revealed by crossing experiments , 2011 .

[2]  Shu-Sheng Liu,et al.  Crossing experiments and behavioral observations reveal reproductive incompatibility among three putative species of the whitefly Bemisia tabaci , 2010 .

[3]  Jun-Bo Luan,et al.  Reproductive incompatibility between the B and Q biotypes of the whitefly Bemisia tabaci in China: genetic and behavioural evidence , 2010, Bulletin of Entomological Research.

[4]  G. Yè,et al.  An Invasive Whitefly Feeding on a Virus-Infected Plant Increased Its Egg Production and Realized Fecundity , 2010, PloS one.

[5]  Shu-Sheng Liu,et al.  Low frequency of horizontal and vertical transmission of two begomoviruses through whiteflies exhibits little relevance to the vector infectivity , 2010 .

[6]  Chuan-Xi Zhang,et al.  De novo characterization of a whitefly transcriptome and analysis of its gene expression during development , 2010, BMC Genomics.

[7]  Y. Buckley,et al.  Refined Global Analysis of Bemisia tabaci (Hemiptera: Sternorrhyncha: Aleyrodoidea: Aleyrodidae) Mitochondrial Cytochrome Oxidase 1 to Identify Species Level Genetic Boundaries , 2010 .

[8]  G. Guernec,et al.  Transcriptomic analysis of intestinal genes following acquisition of pea enation mosaic virus by the pea aphid Acyrthosiphon pisum. , 2010, The Journal of general virology.

[9]  P. D. De Barro,et al.  Reproductive incompatibility among genetic groups of Bemisia tabaci supports the proposition that the whitefly is a cryptic species complex , 2010, Bulletin of Entomological Research.

[10]  E. Bejarano,et al.  Begomovirus coat protein interacts with a small heat‐shock protein of its transmission vector (Bemisia tabaci) , 2009, Insect molecular biology.

[11]  S. Kudchodkar,et al.  Viruses and autophagy , 2009, Reviews in medical virology.

[12]  Vilmos Ágoston,et al.  Deep sequencing of the zebrafish transcriptome response to mycobacterium infection. , 2009, Molecular immunology.

[13]  J. Zhai,et al.  Short-read sequencing technologies for transcriptional analyses. , 2009, Annual review of plant biology.

[14]  S. Cherry,et al.  Autophagy is an essential component of Drosophila immunity against vesicular stomatitis virus. , 2009, Immunity.

[15]  W. Surachetpong,et al.  MAPK ERK Signaling Regulates the TGF-β1-Dependent Mosquito Response to Plasmodium falciparum , 2009, PLoS pathogens.

[16]  P. Caciagli,et al.  Virion Stability Is Important for the Circulative Transmission of Tomato Yellow Leaf Curl Sardinia Virus by Bemisia tabaci, but Virion Access to Salivary Glands Does Not Guarantee Transmissibility , 2009, Journal of Virology.

[17]  B. Levine,et al.  Autophagy, antiviral immunity, and viral countermeasures , 2009, Biochimica et Biophysica Acta (BBA) - Molecular Cell Research.

[18]  Yin Li,et al.  RKP, a RING finger E3 ligase induced by BSCTV C4 protein, affects geminivirus infection by regulation of the plant cell cycle. , 2009, The Plant journal : for cell and molecular biology.

[19]  J. Ohnishi,et al.  A selective barrier in the midgut epithelial cell membrane of the nonvector whitefly Trialeurodes vaporariorum to Tomato yellow leaf curl virus uptake , 2009, Journal of General Plant Pathology.

[20]  V. Marmaras,et al.  Regulators and signalling in insect haemocyte immunity. , 2009, Cellular signalling.

[21]  A. Bowie,et al.  Viral evasion and subversion of pattern-recognition receptor signalling , 2008, Nature Reviews Immunology.

[22]  R. Vossen,et al.  Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms , 2008, Nucleic acids research.

[23]  S. Chittaranjan,et al.  Effector caspase Dcp-1 and IAP protein Bruce regulate starvation-induced autophagy during Drosophila melanogaster oogenesis , 2008, The Journal of cell biology.

[24]  Z. Tu,et al.  Odorant Receptor C-Terminal Motifs in Divergent Insect Species , 2008, Journal of Insect Science.

[25]  M. Stephens,et al.  RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays. , 2008, Genome research.

[26]  M. Redinbaugh,et al.  Insect vector interactions with persistently transmitted viruses. , 2008, Annual review of phytopathology.

[27]  T. Chu,et al.  Global Analysis of Arabidopsis Gene Expression Uncovers a Complex Array of Changes Impacting Pathogen Response and Cell Cycle during Geminivirus Infection1[W][OA] , 2008, Plant Physiology.

[28]  Zhiyong Xi,et al.  The Aedes aegypti Toll Pathway Controls Dengue Virus Infection , 2008, PLoS pathogens.

[29]  Daniel J. Klionsky,et al.  Autophagy fights disease through cellular self-digestion , 2008, Nature.

[30]  J. Xu,et al.  Asymmetric Mating Interactions Drive Widespread Invasion and Displacement in a Whitefly , 2007, Science.

[31]  T. Shimada,et al.  ERK- and JNK-Dependent Signaling Pathways Contribute to Bombyx mori Nucleopolyhedrovirus Infection , 2007, Journal of Virology.

[32]  V. Marmaras,et al.  Distinct signalling pathways promote phagocytosis of bacteria, latex beads and lipopolysaccharide in medfly haemocytes , 2007, Immunology.

[33]  Robert M. Waterhouse,et al.  Evolutionary Dynamics of Immune-Related Genes and Pathways in Disease-Vector Mosquitoes , 2007, Science.

[34]  P. Codogno,et al.  Involvement of autophagy in viral infections: antiviral function and subversion by viruses , 2007, Journal of Molecular Medicine.

[35]  M. Ressing,et al.  Host shutoff during productive Epstein–Barr virus infection is mediated by BGLF5 and may contribute to immune evasion , 2007, Proceedings of the National Academy of Sciences.

[36]  Xiao Yang,et al.  Vector-Virus Mutualism Accelerates Population Increase of an Invasive Whitefly , 2007, PloS one.

[37]  T. P. Neufeld,et al.  Direct Induction of Autophagy by Atg1 Inhibits Cell Growth and Induces Apoptotic Cell Death , 2007, Current Biology.

[38]  R. Dalton Whitefly infestations: The Christmas Invasion , 2006, Nature.

[39]  M. Jiu,et al.  Acquisition and Transmission of two Begomoviruses by the B and a non‐B Biotype of Bemisia tabaci from Zhejiang, China , 2006 .

[40]  B. Falk,et al.  Virus-vector interactions mediating nonpersistent and semipersistent transmission of plant viruses. , 2006, Annual review of phytopathology.

[41]  K. Söderhäll,et al.  Cell-mediated immunity in arthropods: hematopoiesis, coagulation, melanization and opsonization. , 2006, Immunobiology.

[42]  M. Ghanim,et al.  Whitefly (Bemisia tabaci) genome project: analysis of sequenced clones from egg, instar, and adult (viruliferous and non-viruliferous) cDNA libraries , 2006, BMC Genomics.

[43]  B. Finlay,et al.  Anti-Immunology: Evasion of the Host Immune System by Bacterial and Viral Pathogens , 2006, Cell.

[44]  M. Jeger,et al.  Factors Influencing Begomovirus Evolution and Their Increasing Global Significance: Implications for Sustainable Control , 2006 .

[45]  C. Fauquet,et al.  Revising the way we conceive and name viruses below the species level: A review of geminivirus taxonomy calls for new standardized isolate descriptors , 2005, Archives of Virology.

[46]  M. Gale,et al.  Evasion of intracellular host defence by hepatitis C virus , 2005, Nature.

[47]  M. Strand,et al.  Inhibitor κB-like proteins from a polydnavirus inhibit NF-κB activation and suppress the insect immune response , 2005 .

[48]  V. Vakharia,et al.  The Toll pathway is important for an antiviral response in Drosophila. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[49]  Yajuan Qian,et al.  Pathogenicity and stability of a truncated DNAbeta associated with Tomato yellow leaf curl China virus. , 2005, Virus research.

[50]  C. Fauquet,et al.  A DNAβ Associated with Tomato Yellow Leaf Curl China Virus Is Required for Symptom Induction , 2004, Journal of Virology.

[51]  E. Reinstein Immunologic aspects of protein degradation by the ubiquitin-proteasome system. , 2004, The Israel Medical Association journal : IMAJ.

[52]  R. B. Medeiros,et al.  The Plant Virus Tomato Spotted Wilt Tospovirus Activates the Immune System of Its Main Insect Vector, Frankliniella occidentalis , 2004, Journal of Virology.

[53]  F. Gildow,et al.  Luteovirus-aphid interactions. , 2003, Annual review of phytopathology.

[54]  A. Varma,et al.  Emerging geminivirus problems: A serious threat to crop production , 2003 .

[55]  Yun-Cai Liu,et al.  Ubiquitin ligases and the immune response. , 2003, Annual review of immunology.

[56]  R. Briddon,et al.  Geminivirus disease complexes: an emerging threat. , 2003, Trends in plant science.

[57]  E. Birney,et al.  Immunity-Related Genes and Gene Families in Anopheles gambiae , 2002, Science.

[58]  M. Ghanim,et al.  The circulative pathway of begomoviruses in the whitefly vector Bemisia tabaci— insights from studies with Tomato yellow leaf curl virus , 2002 .

[59]  Thomas J. Henneberry,et al.  History, current status and collaborative research projects for Bemisia tabaci , 2001 .

[60]  M. Ghanim,et al.  Rate of Tomato yellow leaf curl virus Translocation in the Circulative Transmission Pathway of its Vector, the Whitefly Bemisia tabaci. , 2001, Phytopathology.

[61]  M. Ghanim,et al.  The GroEL protein of the whitefly Bemisia tabaci interacts with the coat protein of transmissible and nontransmissible begomoviruses in the yeast two-hybrid system. , 2000, Virology.

[62]  A. Moffat Geminiviruses Emerge as Serious Crop Threat , 1999, Science.

[63]  M. Ikeda,et al.  Cell-cycle perturbation in Sf9 cells infected with Autographa californica nucleopolyhedrovirus. , 1999, Virology.

[64]  B. Webb,et al.  Polydnavirus-mediated suppression of insect immunity. , 1999, Journal of insect physiology.

[65]  D. Mykles Structure and functions of arthropod proteasomes , 1999, Molecular Biology Reports.

[66]  M. Pagano,et al.  Cell cycle regulation by the ubiquitin pathway , 1997, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[67]  J. Claverie,et al.  The significance of digital gene expression profiles. , 1997, Genome research.

[68]  X. Du,et al.  Responses of insect cells to baculovirus infection: protein synthesis shutdown and apoptosis , 1997, Journal of virology.

[69]  H. Czosnek,et al.  Long-term association of tomato yellow leaf curl virus with its whitefly vector Bemisia tabaci: effect on the insect transmission capacity, longevity and fecundity. , 1997, The Journal of general virology.

[70]  B. Webb,et al.  Polydnavirus infection inhibits translation of specific growth-associated host proteins. , 1997, Insect biochemistry and molecular biology.

[71]  S. Dib-Hajj,et al.  Polydnavirus-facilitated endoparasite protection against host immune defenses. , 1995, Proceedings of the National Academy of Sciences of the United States of America.

[72]  B. Webb,et al.  Polydnavirus infection inhibits synthesis of an insect plasma protein, arylphorin. , 1994, The Journal of general virology.

[73]  L. Boykin,et al.  Bemisia tabaci: a statement of species status. , 2011, Annual review of entomology.

[74]  M. Gerstein,et al.  RNA-Seq: a revolutionary tool for transcriptomics , 2009, Nature Reviews Genetics.

[75]  T. P. Neufeld,et al.  Experimental control and characterization of autophagy in Drosophila. , 2008, Methods in molecular biology.

[76]  O. Terenius Hemolin-A lepidopteran anti-viral defense factor? , 2008, Developmental and comparative immunology.

[77]  H. Czosnek Tomato yellow leaf curl virus disease : management, molecular biology, breeding for resistance , 2007 .

[78]  G. Gibson,et al.  Host-plant viral infection effects on arthropod-vector population growth, development and behaviour: management and epidemiological implications. , 2006, Advances in virus research.

[79]  R. J. Clem The role of apoptosis in defense against baculovirus infection in insects. , 2005, Current topics in microbiology and immunology.

[80]  W. Dalton,et al.  The proteasome. , 2004, Seminars in oncology.

[81]  M. Ghanim,et al.  WHITEFLIES : VECTORS , AND VICTIMS ( ? , 2003 .

[82]  M. Ghanim,et al.  Whiteflies: vectors, and victims (?), of geminiviruses. , 2001, Advances in virus research.

[83]  P. Caillet-Fauquet,et al.  Viruses and the cell cycle. , 1997, Progress in cell cycle research.

[84]  Rosemarie C. Rosell,et al.  The sweetpotato or silverleaf whiteflies: biotypes of Bemisia tabaci or a species complex? , 1995 .

[85]  K. Maramorosch,et al.  HARMFUL AND BENEFICIAL EFFECTS OF PLANT VIRUSES IN INSECTS. , 1963, Annual review of microbiology.