Analysis of the CD2 and spliceosomal Sm B/B′ polyproline‐arginine motifs defined by a monoclonal antibody using a phage‐displayed random peptide library

The cytoplasmic region of the CD2 receptor of lymphocytes contains proline‐rich motifs, which are involved in T cell activation and interleukin‐2 production. An intracellular CD2 binding protein, CD2BP2, interacts with two tandem PPPPGHR segments of the CD2 tail. CD2BP2 contains a GYF (glycine‐tyrosine‐phenylalanine) domain that confers binding to these proline‐rich sequences. Monoclonal antibody 3E10 that was previously raised against a peptide containing the CD2 PPPPGHR segment reacts with the native CD2 molecule and spliceosomal Sm B/B′ proteins. To identify the exact epitope on the CD2 peptide recognized by 3E10, a phage‐displayed combinatorial peptide library was used. Analysis of the selected clones revealed that the mAb 3E10 binds preferentially to the motif PxxPPGxR. Experiments using amino acid substitutions with synthetic peptides confirmed the reactivity of mAb 3E10 with this motif. In addition, we show that several similarities exist between this motif and the CD2BP2‐GFY recognition motif PPGxR/K. Binding of antibody 3E10 indicates some degree of degeneracy, which is consistent with its ability to recognize structurally related polyproline–arginine motifs found in intracellular proteins including Sm B/B′ proteins and other RNA binding proteins. Thus, mAb 3E10 can be used to specifically identify a sub‐class of proline‐rich motifs, and as such can be used to study the potential role of these proline‐rich sequences in mediating protein‐protein interactions. Copyright © 2006 John Wiley & Sons, Ltd.

[1]  J. Scott,et al.  Searching for peptide ligands with an epitope library. , 1990, Science.

[2]  C. Freund,et al.  Recognition Sequences for the GYF Domain Reveal a Possible Spliceosomal Function of CD2BP2* , 2004, Journal of Biological Chemistry.

[3]  A. Kramer,et al.  Spot synthesis: observations and optimizations. , 1999, The journal of peptide research : official journal of the American Peptide Society.

[4]  R. Hoess,et al.  Phage display of peptides and protein domains , 1993 .

[5]  J. Hansen,et al.  Identification of a human T lymphocyte surface protein associated with the E-rosette receptor , 1981, The Journal of experimental medicine.

[6]  E. Reinherz,et al.  Involvement of the PPPGHR motif in T cell activation via CD2 , 1990, The Journal of experimental medicine.

[7]  Gerhard Wagner,et al.  The GYF domain is a novel structural fold that is involved in lymphoid signaling through proline-rich sequences , 1999, Nature Structural Biology.

[8]  J. Harley,et al.  Linear epitope mapping of an Sm B/B' polypeptide. , 1992, Journal of immunology.

[9]  E. Harlow,et al.  Antibodies: A Laboratory Manual , 1988 .

[10]  R. Weinberg,et al.  Association of Sos Ras exchange protein with Grb2 is implicated in tyrosine kinase signal transduction and transformation , 1993, Nature.

[11]  U. Lindberg,et al.  Actin polymerizability is influenced by profilin, a low molecular weight protein in non-muscle cells. , 1977, Journal of molecular biology.

[12]  R. Kriz,et al.  Sequence similarity of phospholipase C with the non-catalytic region of src , 1988, Nature.

[13]  K. Lam,et al.  A new type of synthetic peptide library for identifying ligand-binding activity , 1992, Nature.

[14]  J. Harley,et al.  Immunoglobulin epitope spreading and autoimmune disease after peptide immunization: Sm B/B'-derived PPPGMRPP and PPPGIRGP induce spliceosome autoimmunity , 1995, The Journal of experimental medicine.

[15]  Ronald Kühne,et al.  Dynamic interaction of CD2 with the GYF and the SH3 domain of compartmentalized effector molecules , 2002, The EMBO journal.

[16]  V. Helms,et al.  Alternative binding modes of proline-rich peptides binding to the GYF domain. , 2005, Biochemistry.

[17]  D. Kioussis,et al.  Reconstitution of an active surface CD2 by DNA transfer in CD2-CD3+ Jurkat cells facilitates CD3-T cell receptor-mediated IL-2 production. , 1991, Journal of immunology.

[18]  R. Rickles,et al.  Phage display selection of ligand residues important for Src homology 3 domain binding specificity. , 1995, Proceedings of the National Academy of Sciences of the United States of America.

[19]  J. Devlin,et al.  Random peptide libraries: a source of specific protein binding molecules. , 1990, Science.

[20]  H. Schaeffer,et al.  A proline-rich sequence unique to MEK1 and MEK2 is required for raf binding and regulates MEK function , 1995, Molecular and cellular biology.

[21]  E. Reinherz,et al.  The Structural Biology of CD2 , 1989, Immunological reviews.

[22]  John D Lambris,et al.  Inhibition of human complement by a C3-binding peptide isolated from a phage-displayed random peptide library. , 1996, Journal of immunology.

[23]  M. Sudol,et al.  The importance of being proline: the interaction of proline‐rich motifs in signaling proteins with their cognate domains , 2000, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[24]  D. Baltimore,et al.  Proline-rich sequences that bind to Src homology 3 domains with individual specificities. , 1995, Proceedings of the National Academy of Sciences of the United States of America.

[25]  M. Kaetzel,et al.  Selection of targeted biological modifiers from a bacteriophage library of random peptides. The identification of novel calmodulin regulatory peptides. , 1993, The Journal of biological chemistry.

[26]  J. Wehland,et al.  A novel proline‐rich motif present in ActA of Listeria monocytogenes and cytoskeletal proteins is the ligand for the EVH1 domain, a protein module present in the Ena/VASP family , 1997, The EMBO journal.

[27]  Hongtao Yu,et al.  Structural basis for the binding of proline-rich peptides to SH3 domains , 1994, Cell.

[28]  I. Campbell,et al.  The GTPase dynamin binds to and is activated by a subset of SH3 domains , 1993, Cell.

[29]  N. Adey,et al.  An M13 phage library displaying random 38-amino-acid peptides as a source of novel sequences with affinity to selected targets. , 1993, Gene.

[30]  P. Bork,et al.  The WW domain: a signalling site in dystrophin? , 1994, Trends in biochemical sciences.

[31]  W. Hahn,et al.  Separable portions of the CD2 cytoplasmic domain involved in signaling and ligand avidity regulation , 1993, The Journal of experimental medicine.

[32]  F. McCormick How receptors turn Ras on , 1993, Nature.

[33]  D. Baltimore,et al.  Identification of a protein that binds to the SH3 region of Abl and is similar to Bcr and GAP-rho. , 1992, Science.

[34]  S. Sprang,et al.  Affinity panning of a library of peptides displayed on bacteriophages reveals the binding specificity of BiP , 1993, Cell.

[35]  D. Monos,et al.  Monoclonal antibody specific to a subclass of polyproline‐arg motif provides evidence for the presence of an snRNA‐free spliceosomal Sm protein complex in vivo: Implications for molecular interactions involving proline‐rich sequences of Sm B/B′ proteins , 1999, Journal of cellular biochemistry.

[36]  B. Mayer,et al.  A novel viral oncogene with structural similarity to phospholipase C , 1988, Nature.

[37]  E. Reinherz,et al.  Structural investigations of a GYF domain covalently linked to a proline-rich peptide , 2003, Journal of biomolecular NMR.

[38]  E. Reinherz,et al.  Identification of a proline-binding motif regulating CD2-triggered T lymphocyte activation. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[39]  S. Schreiber,et al.  Two binding orientations for peptides to the Src SH3 domain: development of a general model for SH3-ligand interactions. , 1995, Science.

[40]  J. Hutchcroft,et al.  Association of p59 fyn with the T Lymphocyte Costimulatory Receptor CD2 , 1998, The Journal of Biological Chemistry.