Design Principles for SuCESsFul Biosensors: Specific Fluorophore/Analyte Binding and Minimization of Fluorophore/Scaffold Interactions.
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A. Wand | B. Imperiali | L. Griffith | K. Wittrup | Elke Socher | M. W. Traxlmayr | Paige Dickson | Bryan S. Marques | Seymour de Picciotto | J. Kiefer | Stephanie Cheung | Sixing Zhao | K. Wittrup | Elke R Socher | A. Wand | Paige M. Dickson | Bryan S. Marques | Jonathan D. Kiefer | Linda G. Griffith
[1] J. J. Macklin,et al. A general method to improve fluorophores for live-cell and single-molecule microscopy , 2014, Nature Methods.
[2] Christopher D Spicer,et al. Selective chemical protein modification , 2014, Nature Communications.
[3] B. Pentelute,et al. Delivery of Antibody Mimics into Mammalian Cells via Anthrax Toxin Protective Antigen , 2014, Chembiochem : a European journal of chemical biology.
[4] L. Liotta,et al. Protein painting reveals solvent-excluded drug targets hidden within native protein–protein interfaces , 2014, Nature Communications.
[5] Dima Kozakov,et al. How Proteins Bind Macrocycles , 2014, Nature chemical biology.
[6] K Dane Wittrup,et al. Equilibrium and dynamic design principles for binding molecules engineered for reagentless biosensors. , 2014, Analytical biochemistry.
[7] M. Eremets,et al. Ammonia as a case study for the spontaneous ionization of a simple hydrogen-bonded compound , 2014, Nature Communications.
[8] B. Imperiali,et al. Tailoring chimeric ligands for studying and biasing ErbB receptor family interactions. , 2014, Angewandte Chemie.
[9] M. Distefano,et al. Enzymatic labeling of proteins: techniques and approaches. , 2013, Bioconjugate chemistry.
[10] K. Hahn,et al. Knowledge-based design of a biosensor to quantify localized ERK activation in living cells. , 2013, Chemistry & biology.
[11] K. Hahn,et al. Environment-sensing merocyanine dyes for live cell imaging applications. , 2013, Bioconjugate chemistry.
[12] D. Irvine,et al. Rapid conformational epitope mapping of anti-gp120 antibodies with a designed mutant panel displayed on yeast. , 2012, Journal of molecular biology.
[13] Sohila Zadran,et al. Fluorescence resonance energy transfer (FRET)-based biosensors: visualizing cellular dynamics and bioenergetics , 2012, Applied Microbiology and Biotechnology.
[14] Gerhard Wagner,et al. Application of iterative soft thresholding for fast reconstruction of NMR data non-uniformly sampled with multidimensional Poisson Gap scheduling , 2012, Journal of Biomolecular NMR.
[15] Shohei Koide,et al. Teaching an old scaffold new tricks: monobodies constructed using alternative surfaces of the FN3 scaffold. , 2012, Journal of molecular biology.
[16] A. Wand,et al. Optimization of NMR spectroscopy of encapsulated proteins dissolved in low viscosity fluids , 2011, Journal of biomolecular NMR.
[17] H. Bedouelle,et al. Reagentless fluorescent biosensors from artificial families of antigen binding proteins. , 2011, Biosensors & bioelectronics.
[18] Steven M. Lewis,et al. A biosensor generated via high throughput screening quantifies cell edge Src dynamics , 2011, Nature chemical biology.
[19] B. Imperiali,et al. Development of a fluorogenic sensor for activated Cdc42. , 2011, Bioorganic & medicinal chemistry letters.
[20] K. Wittrup,et al. The full amino acid repertoire is superior to serine/tyrosine for selection of high affinity immunoglobulin G binders from the fibronectin scaffold. , 2010, Protein engineering, design & selection : PEDS.
[21] A. Plückthun,et al. Knowledge-based design of reagentless fluorescent biosensors from a designed ankyrin repeat protein. , 2010, Protein engineering, design & selection : PEDS.
[22] S. Hyberts,et al. Poisson-gap sampling and forward maximum entropy reconstruction for enhancing the resolution and sensitivity of protein NMR data. , 2010, Journal of the American Chemical Society.
[23] B. Imperiali,et al. Monitoring protein interactions and dynamics with solvatochromic fluorophores. , 2010, Trends in biotechnology.
[24] B. Imperiali,et al. Thiol-reactive derivatives of the solvatochromic 4-N,N-dimethylamino-1,8-naphthalimide fluorophore: a highly sensitive toolset for the detection of biomolecular interactions. , 2009, Bioconjugate chemistry.
[25] B. Imperiali,et al. A versatile amino acid analogue of the solvatochromic fluorophore 4-N,N-dimethylamino-1,8-naphthalimide: a powerful tool for the study of dynamic protein interactions. , 2008, Journal of the American Chemical Society.
[26] A. Kapila,et al. Picomolar affinity fibronectin domains engineered utilizing loop length diversity, recursive mutagenesis, and loop shuffling. , 2008, Journal of molecular biology.
[27] Shohei Koide,et al. A Dominant Conformational Role for Amino Acid Diversity in Minimalist Protein-protein Interfaces Nih Public Access Introduction , 2022 .
[28] James A J Fitzpatrick,et al. Fluorogen-activating single-chain antibodies for imaging cell surface proteins , 2008, Nature Biotechnology.
[29] B. Imperiali,et al. Tools for investigating peptide–protein interactions: peptide incorporation of environment-sensitive fluorophores through SPPS-based 'building block' approach , 2007, Nature Protocols.
[30] G. Clore,et al. Open-to-closed transition in apo maltose-binding protein observed by paramagnetic NMR , 2007, Nature.
[31] B. Imperiali,et al. Fluorogenic probes for monitoring peptide binding to class II MHC proteins in living cells. , 2007, Nature chemical biology.
[32] K Dane Wittrup,et al. Isolating and engineering human antibodies using yeast surface display , 2006, Nature Protocols.
[33] G. Winter,et al. Selection of optical biosensors from chemisynthetic antibody libraries. , 2004, Protein engineering, design & selection : PEDS.
[34] K. Hahn,et al. Activation of Endogenous Cdc42 Visualized in Living Cells , 2004, Science.
[35] A. Plückthun,et al. High-affinity binders selected from designed ankyrin repeat protein libraries , 2004, Nature Biotechnology.
[36] Hugues Bedouelle,et al. Deriving topological constraints from functional data for the design of reagentless fluorescent immunosensors. , 2003, Journal of molecular biology.
[37] Hugues Bedouelle,et al. Knowledge-based design of reagentless fluorescent biosensors from recombinant antibodies. , 2002, Journal of molecular biology.
[38] Jonathan W. Essex,et al. A review of protein-small molecule docking methods , 2002, J. Comput. Aided Mol. Des..
[39] L. Kay,et al. Ligand-induced structural changes to maltodextrin-binding protein as studied by solution NMR spectroscopy. , 2001, Journal of molecular biology.
[40] Kurt Wüthrich,et al. TROSY-TYPE TRIPLE-RESONANCE EXPERIMENTS FOR SEQUENTIAL NMR ASSIGNMENTS OF LARGE PROTEINS , 1999 .
[41] A. Koide,et al. The fibronectin type III domain as a scaffold for novel binding proteins. , 1998, Journal of molecular biology.
[42] K Wüthrich,et al. TROSY in triple-resonance experiments: new perspectives for sequential NMR assignment of large proteins. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[43] Kalle Gehring,et al. Solution NMR Studies of a 42 KDa Escherichia Coli Maltose Binding Protein/β-Cyclodextrin Complex: Chemical Shift Assignments and Analysis , 1998 .
[44] J W Szostak,et al. RNA-peptide fusions for the in vitro selection of peptides and proteins. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[45] A. Plückthun,et al. In vitro selection and evolution of functional proteins by using ribosome display. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[46] G. Mei,et al. Spectroscopic properties of an engineered maltose binding protein. , 1997, Protein engineering.
[47] P. Hajduk,et al. Discovering High-Affinity Ligands for Proteins: SAR by NMR , 1996, Science.
[48] S. Grzesiek,et al. NMRPipe: A multidimensional spectral processing system based on UNIX pipes , 1995, Journal of biomolecular NMR.
[49] André Lopez,et al. Drastic changes in the fluorescence properties of NBD probes with the polarity of the medium: involvement of a TICT state? , 1993 .
[50] F. Quiocho,et al. The 2.3-A resolution structure of the maltose- or maltodextrin-binding protein, a primary receptor of bacterial active transport and chemotaxis. , 1992, The Journal of biological chemistry.
[51] T. Clackson,et al. Making antibody fragments using phage display libraries , 1991, Nature.
[52] D L Sackett,et al. Nile red as a polarity-sensitive fluorescent probe of hydrophobic protein surfaces. , 1987, Analytical biochemistry.
[53] W. Rettig. Charge Separation in Excited States of Decoupled Systems. TICT Compounds and Implications Regarding the Development of New Laser Dyes and the Primary Processes of Vision and Photosynthesis , 1987 .
[54] Wolfgang Rettig. Ladungstrennung in angeregten Zuständen entkoppelter Systeme – TICT-Verbindungen und Implikationen für die Entwicklung neuer Laserfarbstoffe sowie für den Primärprozeß von Sehvorgang und Photosynthese , 1986 .
[55] W. Rettig. Charge Separation in Excited States of Decoupled Systems—TICT Compounds and Implications Regarding the Development of New Laser Dyes and the Primary Process of Vision and Photosynthesis , 1986 .
[56] W. Rettig,et al. Dependence of intramolecular rotation in p-cyano-N,N-dialkylanilines on the twist angle. A fluorescence, UV absorption, and photoelectron spectroscopic study , 1985 .
[57] E. Voss,et al. Mechanism of quenching of fluorescein by anti-fluorescein IgG antibodies. , 1977, Immunochemistry.
[58] Kenner Ra,et al. A new fluorescent probe for protein and nucleoprotein conformation. Binding of 7-(p-methoxybenzylamino)-4-nitrobenzoxadiazole to bovine trypsinogen and bacterial ribosomes. , 1971 .
[59] D. Koshland,et al. USE OF "REPORTER GROUPS" IN STRUCTURE-FUNCTION STUDIES OF PROTEINS. , 1964, Proceedings of the National Academy of Sciences of the United States of America.
[60] Tiffany F. Chen,et al. Engineering fibronectin-based binding proteins by yeast surface display. , 2013, Methods in enzymology.
[61] W. Delano. The PyMOL Molecular Graphics System , 2002 .