Automated Transition State Searches without Evaluating the Hessian.

Accurate and speedy determination of transition structures (TSs) is essential for computational studies on reaction pathways, particularly when the process involves expensive electronic structure calculations. Many search algorithms require a good initial guess of the TS geometry, as well as a Hessian input that possesses a structure consistent with the desired saddle point. Among the double-ended interpolation methods for generation of the guess for the TS, the freezing string method (FSM) is proven to be far less expensive compared to its predecessor, the growing string method (GSM). In this paper, it is demonstrated that the efficiency of this technique can be improved further by replacing the conjugate gradient optimization step (FSM-CG) with a quasi-Newton line search coupled with a BFGS Hessian update (FSM-BFGS). A second crucial factor that affects the speed with which convergence to the TS is achieved is the quality and cost of the Hessian of the energy for the guessed TS. For electronic structure calculations, the cost of calculating an exact Hessian increases more rapidly with system size than the energy and gradient. Therefore, to sidestep calculation of the exact Hessian, an approximate Hessian is constructed, using the tangent direction and local curvature at the TS guess. It is demonstrated that the partitioned-rational function optimization algorithm for locating TSs with this approximate Hessian input performs at least as well as with an exact Hessian input in most test cases. The two techniques, FSM and approximate Hessian construction, therefore can significantly reduce costs associated with finding TSs.

[1]  H. Bernhard Schlegel,et al.  Estimating the hessian for gradient-type geometry optimizations , 1984 .

[2]  W. Miller,et al.  ON FINDING TRANSITION STATES , 1981 .

[3]  Lindsey J. Munro,et al.  DEFECT MIGRATION IN CRYSTALLINE SILICON , 1999 .

[4]  Roi Baer,et al.  A spline for your saddle. , 2008, The Journal of chemical physics.

[5]  W. Kohn,et al.  Self-Consistent Equations Including Exchange and Correlation Effects , 1965 .

[6]  D. Wales,et al.  A doubly nudged elastic band method for finding transition states. , 2004, The Journal of chemical physics.

[7]  Jon Baker,et al.  The generation and use of delocalized internal coordinates in geometry optimization , 1996 .

[8]  B. Brooks,et al.  A super-linear minimization scheme for the nudged elastic band method , 2003 .

[9]  Benny G. Johnson,et al.  An implementation of analytic second derivatives of the gradient‐corrected density functional energy , 1994 .

[10]  David J. Wales,et al.  Basins of attraction for stationary points on a potential-energy surface , 1992 .

[11]  A. Chakraborty,et al.  A growing string method for determining transition states: comparison to the nudged elastic band and string methods. , 2004, The Journal of chemical physics.

[12]  Steven K. Burger,et al.  Quadratic string method for determining the minimum-energy path based on multiobjective optimization. , 2006, The Journal of chemical physics.

[13]  Julia E. Rice,et al.  Implementation of analytic derivative methods in quantum chemistry , 1989 .

[14]  M. Zerner,et al.  A Broyden—Fletcher—Goldfarb—Shanno optimization procedure for molecular geometries , 1985 .

[15]  Roland Lindh,et al.  ON THE USE OF A HESSIAN MODEL FUNCTION IN MOLECULAR GEOMETRY OPTIMIZATIONS , 1995 .

[16]  F. Keil Multiscale modelling in computational heterogeneous catalysis. , 2012, Topics in current chemistry.

[17]  G. Henkelman,et al.  Improved tangent estimate in the nudged elastic band method for finding minimum energy paths and saddle points , 2000 .

[18]  W. E,et al.  Finite temperature string method for the study of rare events. , 2002, Journal of Physical Chemistry B.

[19]  Andreas M Köster,et al.  A hierarchical transition state search algorithm. , 2008, The Journal of chemical physics.

[20]  Mills,et al.  Quantum and thermal effects in H2 dissociative adsorption: Evaluation of free energy barriers in multidimensional quantum systems. , 1994, Physical review letters.

[21]  J. Baker An algorithm for the location of transition states , 1986 .

[22]  D. Wales Locating stationary points for clusters in cartesian coordinates , 1993 .

[23]  G. Henkelman,et al.  A dimer method for finding saddle points on high dimensional potential surfaces using only first derivatives , 1999 .

[24]  Paul M Zimmerman,et al.  Incorporating Linear Synchronous Transit Interpolation into the Growing String Method: Algorithm and Applications. , 2011, Journal of chemical theory and computation.

[25]  H. Bernhard Schlegel,et al.  Exploring potential energy surfaces for chemical reactions: An overview of some practical methods , 2003, J. Comput. Chem..

[26]  Hugh Chaffey-Millar,et al.  Improving Upon String Methods for Transition State Discovery. , 2012, Journal of chemical theory and computation.

[27]  Steven K. Burger,et al.  Sequential quadratic programming method for determining the minimum energy path. , 2007, The Journal of chemical physics.

[28]  M. Marinica,et al.  Some improvements of the activation-relaxation technique method for finding transition pathways on potential energy surfaces. , 2008, The Journal of chemical physics.

[29]  Shawn T. Brown,et al.  Advances in methods and algorithms in a modern quantum chemistry program package. , 2006, Physical chemistry chemical physics : PCCP.

[30]  Paul M Zimmerman,et al.  Efficient exploration of reaction paths via a freezing string method. , 2011, The Journal of chemical physics.

[31]  Eric Vanden-Eijnden,et al.  Simplified and improved string method for computing the minimum energy paths in barrier-crossing events. , 2007, The Journal of chemical physics.

[32]  E. Vanden-Eijnden,et al.  String method for the study of rare events , 2002, cond-mat/0205527.

[33]  Viktorya Aviyente,et al.  Computational study of factors controlling the boat and chair transition states of Ireland-Claisen rearrangements. , 2010, The Journal of organic chemistry.

[34]  P. Hohenberg,et al.  Inhomogeneous Electron Gas , 1964 .

[35]  Wolfgang Quapp,et al.  A growing string method for the reaction pathway defined by a Newton trajectory. , 2005, The Journal of chemical physics.

[36]  H. Schlegel,et al.  Optimization of equilibrium geometries and transition structures , 1982 .

[37]  W. Lipscomb,et al.  The synchronous-transit method for determining reaction pathways and locating molecular transition states , 1977 .

[38]  V. Schramm,et al.  Transition state structure of the solvolytic hydrolysis of NAD , 1997 .

[39]  M. Head‐Gordon,et al.  Quantum mechanical modeling of catalytic processes. , 2011, Annual review of chemical and biomolecular engineering.

[40]  M. Head‐Gordon,et al.  Development and application of a hybrid method involving interpolation and ab initio calculations for the determination of transition states. , 2008, The Journal of chemical physics.

[41]  Satoshi Maeda,et al.  An Automated and Systematic Transition Structure Explorer in Large Flexible Molecular Systems Based on Combined Global Reaction Route Mapping and Microiteration Methods. , 2009, Journal of chemical theory and computation.

[42]  A. Bell,et al.  Efficient methods for finding transition states in chemical reactions: comparison of improved dimer method and partitioned rational function optimization method. , 2005, The Journal of chemical physics.

[43]  P. Jørgensen,et al.  Walking on potential energy surfaces , 1983 .

[44]  Anthony Goodrow,et al.  A strategy for obtaining a more accurate transition state estimate using the growing string method , 2010 .

[45]  Peter Pulay,et al.  Geometry optimization in redundant internal coordinates , 1992 .

[46]  Anthony Goodrow,et al.  Transition state-finding strategies for use with the growing string method. , 2009, The Journal of chemical physics.

[47]  H. Schlegel,et al.  A combined method for determining reaction paths, minima, and transition state geometries , 1997 .

[48]  G. Henkelman,et al.  A climbing image nudged elastic band method for finding saddle points and minimum energy paths , 2000 .