Identification of novel Ralstonia solanacearum type III effector proteins through translocation analysis of hrpB-regulated gene products.

The Hrp type III secretion system (TTSS) is essential for the pathogenicity of Ralstonia solanacearum on host plants. Hrp TTSS is a specialized secretion system that injects virulence proteins, the so-called type III effector proteins, into plant cells. In R. solanacearum, the expression of Hrp TTSS-related genes is regulated by an AraC-type transcriptional activator, HrpB. We have identified 30 hrpB-regulated hpx (hrpB-dependent expression) genes and three well-known hrpB-regulated genes, popA, popB and popC, as candidate effector genes in R. solanacearum strain RS1000. In this study, we newly cloned 11 additional candidate effector genes that share homology with known hpx genes from R. solanacearum RS1000. Using a Cya reporter system, we investigated the translocation of these 44 gene products into plant cells via the Hrp TTSS and identified 34 effector proteins. These include three effector families composed of more than four members, namely the Hpx4, Hpx30 and GALA families. The Hpx30 family effectors are 2200-2500 aa in size and appear to be the largest class of effector proteins among animal- and plant-pathogenic bacteria. Members of this family contain 12-18 tandem repeats of a novel 42 aa motif, designated SKWP repeats.

[1]  M. Anisimova,et al.  Origin and Evolution of GALA-LRR, a New Member of the CC-LRR Subfamily: From Plants to Bacteria? , 2008, PloS one.

[2]  Hans Wolf-Watz,et al.  Protein delivery into eukaryotic cells by type III secretion machines , 2006, Nature.

[3]  Jonathan D. G. Jones,et al.  The plant immune system , 2006, Nature.

[4]  J. Weissenbach,et al.  Genome sequence of the plant pathogen Ralstonia solanacearum , 2002, Nature.

[5]  A. Collmer,et al.  EFFECTOR PROTEINS : Double Agents in Bacterial Disease and Plant Defense , 2004 .

[6]  J. Sambrook,et al.  Molecular Cloning: A Laboratory Manual , 2001 .

[7]  Tetsuya Hayashi,et al.  An extensive repertoire of type III secretion effectors in Escherichia coli O157 and the role of lambdoid phages in their dissemination , 2006, Proceedings of the National Academy of Sciences.

[8]  M. Schell Control of Virulence and Pathogenicity Genes of Ralstonia Solanacearum by an Elaborate Sensory Network. , 2000, Annual review of phytopathology.

[9]  U. Bonas,et al.  The Type III-Dependent Hrp Pilus Is Required for Productive Interaction of Xanthomonas campestris pv. vesicatoria with Pepper Host Plants , 2005, Journal of bacteriology.

[10]  C. Boucher,et al.  Genome-wide analysis of gene expression in Ralstonia solanacearum reveals that the hrpB gene acts as a regulatory switch controlling multiple virulence pathways. , 2005, Molecular plant-microbe interactions : MPMI.

[11]  T. Mukaihara,et al.  Mutations in the lrpE gene of Ralstonia solanacearum affects Hrp pili production and virulence. , 2006, Molecular plant-microbe interactions : MPMI.

[12]  S. He,et al.  Role of the Hrp Pilus in Type III Protein Secretion in Pseudomonas syringae , 2001, Science.

[13]  C. Boucher,et al.  Transposon Mutagenesis of Pseudomonas solanacearum: Isolation of Tn5-Induced Avirulent Mutants , 1985 .

[14]  A. Breitkreutz,et al.  Type III secretion effectors of the IpaH family are E3 ubiquitin ligases. , 2007, Cell host & microbe.

[15]  Xiaochun Ge,et al.  AtNUDT7, a Negative Regulator of Basal Immunity in Arabidopsis, Modulates Two Distinct Defense Response Pathways and Is Involved in Maintaining Redox Homeostasis1[C][OA] , 2007, Plant Physiology.

[16]  Brian J Staskawicz,et al.  Direct biochemical evidence for type III secretion-dependent translocation of the AvrBs2 effector protein into plant cells , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[17]  A. Collmer,et al.  A survey of the Pseudomonas syringae pv. tomato DC3000 type III secretion system effector repertoire reveals several effectors that are deleterious when expressed in Saccharomyces cerevisiae. , 2008, Molecular plant-microbe interactions : MPMI.

[18]  G. Martin,et al.  A Pseudomonas syringae pv. tomato DC3000 mutant lacking the type III effector HopQ1-1 is able to cause disease in the model plant Nicotiana benthamiana. , 2007, The Plant journal : for cell and molecular biology.

[19]  A. Collmer,et al.  The type III (Hrp) secretion pathway of plant pathogenic bacteria: trafficking harpins, Avr proteins, and death , 1997, Journal of bacteriology.

[20]  L. M. Schechter,et al.  Multiple approaches to a complete inventory of Pseudomonas syringae pv. tomato DC3000 type III secretion system effector proteins. , 2006, Molecular plant-microbe interactions : MPMI.

[21]  C. Boucher,et al.  Evidence that the hrpB gene encodes a positive regulator of pathogenicity genes from Pseudomonas solanacearum , 1992, Molecular microbiology.

[22]  Simone Hahn,et al.  A Bacterial Effector Acts as a Plant Transcription Factor and Induces a Cell Size Regulator , 2007, Science.

[23]  C. Boucher,et al.  The hrp gene locus of Pseudomonas solanacearum, which controls the production of a type III secretion system, encodes eight proteins related to components of the bacterial flagellar biogenesis complex , 1995, Molecular microbiology.

[24]  Sheng Yang He,et al.  Identification of novel hrp‐regulated genes through functional genomic analysis of the Pseudomonas syringae pv. tomato DC3000 genome , 2002, Molecular microbiology.

[25]  Stephen J. Elledge,et al.  SKP1 Connects Cell Cycle Regulators to the Ubiquitin Proteolysis Machinery through a Novel Motif, the F-Box , 1996, Cell.

[26]  Monica Vencato,et al.  Whole-genome expression profiling defines the HrpL regulon of Pseudomonas syringae pv. tomato DC3000, allows de novo reconstruction of the Hrp cis clement, and identifies novel coregulated genes. , 2006, Molecular plant-microbe interactions : MPMI.

[27]  T. Mukaihara,et al.  Isolation of Ralstonia solanacearum hrpB constitutive mutants and secretion analysis of hrpB-regulated gene products that share homology with known type III effectors and enzymes. , 2005, Microbiology.

[28]  A. Hayward Biology and epidemiology of bacterial wilt caused by pseudomonas solanacearum. , 1991, Annual review of phytopathology.

[29]  M. B. Mudgett,et al.  A genetic screen to isolate type III effectors translocated into pepper cells during Xanthomonas infection. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[30]  S. He,et al.  Hrp pilus: an hrp-dependent bacterial surface appendage produced by Pseudomonas syringae pv. tomato DC3000. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[31]  Alan Collmer,et al.  Pseudomonas syringae Type III Secretion System Targeting Signals and Novel Effectors Studied with a Cya Translocation Reporter , 2004, Journal of bacteriology.

[32]  G. Cornelis,et al.  Translocation of a hybrid YopE‐adenylate cyclase from Yersinia enterocolitica into HeLa cells , 1994, Molecular microbiology.

[33]  U. Gophna,et al.  Bacterial type III secretion systems are ancient and evolved by multiple horizontal-transfer events. , 2003, Gene.

[34]  M. B. Mudgett New insights to the function of phytopathogenic bacterial type III effectors in plants. , 2005, Annual review of plant biology.

[35]  C. Boucher,et al.  Inventory and functional analysis of the large Hrp regulon in Ralstonia solanacearum: identification of novel effector proteins translocated to plant host cells through the type III secretion system , 2004, Molecular microbiology.

[36]  P. Genschik,et al.  Ralstonia solanacearum requires F-box-like domain-containing type III effectors to promote disease on several host plants , 2006, Proceedings of the National Academy of Sciences.

[37]  David S Guttman,et al.  A functional screen for the type III (Hrp) secretome of the plant pathogen Pseudomonas syringae. , 2002, Science.

[38]  Xiaoyan Tang,et al.  Flagellin induces innate immunity in nonhost interactions that is suppressed by Pseudomonas syringae effectors. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[39]  G. Cornelis,et al.  Assembly and function of type III secretory systems. , 2000, Annual review of microbiology.

[40]  C. Boucher,et al.  PopA1, a protein which induces a hypersensitivity‐like response on specific Petunia genotypes, is secreted via the Hrp pathway of Pseudomonas solanacearum. , 1994, The EMBO journal.

[41]  Jeff H. Chang,et al.  A high-throughput, near-saturating screen for type III effector genes from Pseudomonas syringae. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[42]  C. Boucher,et al.  Ralstonia solanacearum produces Hrp‐dependent pili that are required for PopA secretion but not for attachment of bacteria to plant cells , 2000, Molecular microbiology.

[43]  S. He,et al.  Suppression of host defense in compatible plant-Pseudomonas syringae interactions. , 2005, Current opinion in plant biology.

[44]  T. Mukaihara,et al.  Genetic screening of Hrp type III‐related pathogenicity genes controlled by the HrpB transcriptional activator in Ralstonia solanacearum , 2004, Molecular microbiology.

[45]  G. Martin,et al.  Genomewide identification of Pseudomonas syringae pv. tomato DC3000 promoters controlled by the HrpL alternative sigma factor , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[46]  A. Pühler,et al.  A Broad Host Range Mobilization System for In Vivo Genetic Engineering: Transposon Mutagenesis in Gram Negative Bacteria , 1983, Bio/Technology.

[47]  M. Gueneron,et al.  Two novel proteins, PopB, which has functional nuclear localization signals, and PopC, which has a large leucine‐rich repeat domain, are secreted through the Hrp‐secretion apparatus of Ralstonia solanacearum , 2000, Molecular microbiology.

[48]  U. Bonas,et al.  cDNA‐AFLP analysis unravels a genome‐wide hrpG‐regulon in the plant pathogen Xanthomonas campestris pv. vesicatoria , 2001, Molecular microbiology.

[49]  C. Boucher,et al.  Pseudomonas solanacearum genes controlling both pathogenicity on tomato and hypersensitivity on tobacco are clustered , 1987, Journal of bacteriology.

[50]  Sheng Yang He,et al.  Type III protein secretion mechanism in mammalian and plant pathogens , 2004 .

[51]  J. Galán,et al.  Type III Secretion Machines: Bacterial Devices for Protein Delivery into Host Cells , 1999 .

[52]  Alan Collmer,et al.  Genomewide identification of proteins secreted by the Hrp type III protein secretion system of Pseudomonas syringae pv. tomato DC3000 , 2002, Proceedings of the National Academy of Sciences of the United States of America.