Analysis of hydrogen-bond interaction potentials from the electron density: integration of noncovalent interaction regions.

Hydrogen bonds are of crucial relevance to many problems in chemistry, biology, and materials science. The recently developed NCI (noncovalent interactions) index enables real-space visualization of both attractive (van der Waals and hydrogen-bonding) and repulsive (steric) interactions based on properties of the electron density. It is thus an optimal index to describe the interplay of stabilizing and destabilizing contributions that determine stable minima on hydrogen-bonding potential-energy surfaces (PESs). In the framework of density-functional theory, energetics are completely determined by the electron density. Consequently, NCI will be shown to allow quantitative treatment of hydrogen-bond energetics. The evolution of NCI regions along a PES follows a well-behaved pattern which, upon integration of the electron density, is capable of mimicking conventional hydrogen-bond interatomic potentials.

[1]  P. Hohenberg,et al.  Inhomogeneous Electron Gas , 1964 .

[2]  S. J. Grabowski Analysis of CO…HO interactions in organic crystal structures , 1998 .

[3]  C David Sherrill,et al.  Oscillations in meta-generalized-gradient approximation potential energy surfaces for dispersion-bound complexes. , 2009, The Journal of chemical physics.

[4]  Julia Contreras-García,et al.  Revealing noncovalent interactions. , 2010, Journal of the American Chemical Society.

[5]  Mark A. Spackman,et al.  Chemical properties from the promolecule , 1986 .

[6]  B. Silvi The synaptic order: a key concept to understand multicenter bonding , 2002 .

[7]  G. Desiraju A bond by any other name. , 2011, Angewandte Chemie.

[8]  R. Bader,et al.  Virial Field Relationship for Molecular Charge Distributions and the Spatial Partitioning of Molecular Properties , 1972 .

[9]  E. Lippincott,et al.  One‐Dimensional Model of the Hydrogen Bond , 1955 .

[10]  K. Dill Dominant forces in protein folding. , 1990, Biochemistry.

[11]  H. Schlegel,et al.  Optimization of equilibrium geometries and transition structures , 1982 .

[12]  Hanno Essén,et al.  The characterization of atomic interactions , 1984 .

[13]  S. Scheiner,et al.  Hydrogen bonding and proton transfers involving triply bonded atoms. Acetylene and hydrocyanic acid , 1987 .

[14]  Á. M. Pendás,et al.  Bond paths as privileged exchange channels. , 2007, Chemistry.

[15]  Sebastian Fiedler,et al.  Protein folding in membranes , 2010, Cellular and Molecular Life Sciences.

[16]  Bernard Silvi,et al.  Understanding the molecular mechanism of the 1,3-dipolar cycloaddition between fulminic acid and acetylene in terms of the electron localization function and catastrophe theory. , 2004, Chemistry.

[17]  S. J. Grabowski BeH 2 as a proton-accepting molecule for dihydrogen bonded systems—ab initio study , 2000 .

[18]  A. Savin,et al.  Classification of chemical bonds based on topological analysis of electron localization functions , 1994, Nature.

[19]  A. Sironi,et al.  Chemical bonding in transition metal carbonyl clusters: complementary analysis of theoretical and experimental electron densities , 2003 .

[20]  Jean-Philip Piquemal,et al.  NCIPLOT: a program for plotting non-covalent interaction regions. , 2011, Journal of chemical theory and computation.

[21]  T. S. Moore,et al.  CLXXVII.—The state of amines in aqueous solution , 1912 .

[22]  S. J. Grabowski The bond valence model in analysing H-bonds of crystal structures , 2000 .

[23]  V. Saunders,et al.  Crystal field effects on the topological properties of the electron density in molecular crystals: The case of urea , 1994 .

[24]  E. Molins,et al.  Retrieving interaction potentials from the topology of the electron density distribution: The case of hydrogen bonds , 2000 .

[25]  S. J. Grabowski Ab Initio Calculations on Conventional and Unconventional Hydrogen BondsStudy of the Hydrogen Bond Strength , 2001 .

[26]  Á. M. Pendás,et al.  Non-nuclear Maxima of the Electron Density , 1999 .

[27]  C. Lecomte,et al.  Topological analysis of the electron density in hydrogen bonds. , 1999, Acta crystallographica. Section B, Structural science.