Origin, evolution, and biological role of miRNA cluster in DLK-DIO3 genomic region in placental mammals.
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Sean McWilliam | B. Dalrymple | S. McWilliam | Evgeny A. Glazov | W. Barris | Evgeny A Glazov | Wesley C Barris | Brian P Dalrymple | E. A. Glazov
[1] James A. Cuff,et al. Genome sequence, comparative analysis and haplotype structure of the domestic dog , 2005, Nature.
[2] Masahiro Sato,et al. The expression profile of microRNAs in mouse embryos , 2006, Nucleic acids research.
[3] Rachael P. Huntley,et al. The Gene Ontology Annotation (GOA) Database , 2009 .
[4] Anton J. Enright,et al. Human MicroRNA Targets , 2004, PLoS biology.
[5] J. V. Moran,et al. Initial sequencing and analysis of the human genome. , 2001, Nature.
[6] Timothy P. L. Smith,et al. Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues. , 2007, Physiological genomics.
[7] Tom H. Pringle,et al. The human genome browser at UCSC. , 2002, Genome research.
[8] D. Haussler,et al. Evolution's cauldron: Duplication, deletion, and rearrangement in the mouse and human genomes , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[9] Colin N. Dewey,et al. Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution , 2004, Nature.
[10] A. Force,et al. Preservation of duplicate genes by complementary, degenerative mutations. , 1999, Genetics.
[11] Christoph Flamm,et al. The expansion of the metazoan microRNA repertoire , 2006, BMC Genomics.
[12] Manolis Kellis,et al. Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs. , 2007, Genome research.
[13] P. Sharp,et al. Embryonic stem cell-specific MicroRNAs. , 2003, Developmental cell.
[14] Gary Ruvkun,et al. Identification of many microRNAs that copurify with polyribosomes in mammalian neurons , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[15] R. Plasterk,et al. Micro RNAs in Animal Development , 2006, Cell.
[16] Martina Paulsen,et al. Imprinted microRNA genes transcribed antisense to a reciprocally imprinted retrotransposon-like gene , 2003, Nature Genetics.
[17] Lin He,et al. MicroRNAs: small RNAs with a big role in gene regulation , 2004, Nature reviews genetics.
[18] Jean L. Chang,et al. Initial sequence of the chimpanzee genome and comparison with the human genome , 2005, Nature.
[19] Michael Zuker,et al. Mfold web server for nucleic acid folding and hybridization prediction , 2003, Nucleic Acids Res..
[20] S. Moon,et al. Human embryonic stem cells express a unique set of microRNAs. , 2004, Developmental biology.
[21] Vetle I. Torvik,et al. Mammalian microRNAs derived from genomic repeats. , 2005, Trends in genetics : TIG.
[22] R. Aharonov,et al. Identification of hundreds of conserved and nonconserved human microRNAs , 2005, Nature Genetics.
[23] Brian S. Roberts,et al. The colorectal microRNAome. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[24] Lisa M. D'Souza,et al. Genome sequence of the Brown Norway rat yields insights into mammalian evolution , 2004, Nature.
[25] Eugene Berezikov,et al. Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis. , 2006, Genome research.
[26] R. Mihrshahi. The corpus callosum as an evolutionary innovation. , 2006, Journal of experimental zoology. Part B, Molecular and developmental evolution.
[27] Kristin C. Gunsalus,et al. microRNA Target Predictions across Seven Drosophila Species and Comparison to Mammalian Targets , 2005, PLoS Comput. Biol..
[28] W. J. Kent,et al. BLAT--the BLAST-like alignment tool. , 2002, Genome research.
[29] A. Hatzigeorgiou,et al. Redirection of Silencing Targets by Adenosine-to-Inosine Editing of miRNAs , 2007, Science.
[30] E. Lai,et al. The Mirtron Pathway Generates microRNA-Class Regulatory RNAs in Drosophila , 2007, Cell.
[31] Steven E. Brenner,et al. WebLogo: A sequence logo generator - eScholarship , 2004 .
[32] Edwin Cuppen,et al. Diversity of microRNAs in human and chimpanzee brain , 2006, Nature Genetics.
[33] Paramvir S. Dehal,et al. Whole-Genome Shotgun Assembly and Analysis of the Genome of Fugu rubripes , 2002, Science.
[34] T. Tuschl,et al. New microRNAs from mouse and human. , 2003, RNA.
[35] Allan R. Jones,et al. Genome-wide atlas of gene expression in the adult mouse brain , 2007, Nature.
[36] Seungyoon Nam,et al. Prediction of Mammalian MicroRNA Targets - Comparative Genomics Approach with Longer 3' UTR Databases , 2005 .
[37] Charles Elkan,et al. Fitting a Mixture Model By Expectation Maximization To Discover Motifs In Biopolymer , 1994, ISMB.
[38] Joel Dudley,et al. TimeTree: a public knowledge-base of divergence times among organisms , 2006, Bioinform..
[39] Sean R. Eddy,et al. Rfam: annotating non-coding RNAs in complete genomes , 2004, Nucleic Acids Res..
[40] Michael Pheasant,et al. Transposon-free regions in mammalian genomes. , 2005, Genome research.
[41] S. Batalov,et al. A gene atlas of the mouse and human protein-encoding transcriptomes. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[42] Gene Ontology Consortium. The Gene Ontology (GO) database and informatics resource , 2003 .
[43] Peter F Stadler,et al. Molecular evolution of a microRNA cluster. , 2004, Journal of molecular biology.
[44] Bronwen L. Aken,et al. Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences , 2007, Nature.
[45] W. Murphy,et al. Resolution of the Early Placental Mammal Radiation Using Bayesian Phylogenetics , 2001, Science.
[46] S. Guil,et al. The multifunctional RNA-binding protein hnRNP A1 is required for processing of miR-18a , 2007, Nature Structural &Molecular Biology.
[47] Colin N. Dewey,et al. Initial sequencing and comparative analysis of the mouse genome. , 2002 .
[48] J. Cavaille,et al. A large imprinted microRNA gene cluster at the mouse Dlk1-Gtl2 domain. , 2004, Genome research.
[49] Martina Paulsen,et al. Identification of tandemly-repeated C/D snoRNA genes at the imprinted human 14q32 domain reminiscent of those at the Prader-Willi/Angelman syndrome region. , 2002, Human molecular genetics.
[50] L. Richards,et al. Commissure formation in the mammalian forebrain , 2007, Current Opinion in Neurobiology.
[51] Stijn van Dongen,et al. miRBase: microRNA sequences, targets and gene nomenclature , 2005, Nucleic Acids Res..
[52] Terrence S. Furey,et al. The UCSC Genome Browser Database , 2003, Nucleic Acids Res..
[53] D. Rokhsar,et al. Evidence for a microRNA expansion in the bilaterian ancestor , 2006, Development Genes and Evolution.
[54] Mark A McPeek,et al. The phylogenetic distribution of metazoan microRNAs: insights into evolutionary complexity and constraint. , 2006, Journal of experimental zoology. Part B, Molecular and developmental evolution.