Introduction to Permutation and Resampling-Based Hypothesis Tests*

A resampling-based method of inference—permutation tests—is often used when distributional assumptions are questionable or unmet. Not only are these methods useful for obvious departures from parametric assumptions (e.g., normality) and small sample sizes, but they are also more robust than their parametric counterparts in the presences of outliers and missing data, problems that are often found in clinical child and adolescent psychology research. These methods are increasingly found in statistical software programs, making their use more feasible. In this article, we use an application-based approach to provide a brief tutorial on permutation testing. We present some historical perspectives, describe how the tests are formulated, and provide examples of common and specific situations under which the methods are most useful. Finally, we demonstrate the utility of these methods to clinical and adolescent psychology by examining four recent articles employing these methods.

[1]  P. McCullagh Quasi-Likelihood Functions , 1983 .

[2]  S. Harter The Perceived Competence Scale for Children. , 1982 .

[3]  Thomas Bäck An Empirical Comparison , 1996 .

[4]  David M. Stoneman,et al.  Testing for the Inclusion of Variables in Einear Regression by a Randomisation Technique , 1966 .

[5]  Pierre Legendre,et al.  An empirical comparison of permutation methods for tests of partial regression coefficients in a linear model , 1999 .

[6]  Thomas M. Loughin,et al.  Data Analysis by Resampling: Concepts and Applications , 2001, Technometrics.

[7]  P. Good,et al.  Permutation Tests: A Practical Guide to Resampling Methods for Testing Hypotheses , 1995 .

[8]  Nitin R. Patel,et al.  Exact logistic regression: theory and examples. , 1995, Statistics in medicine.

[9]  Peter E. Kennedy Randomization Tests in Econometrics , 1995 .

[10]  Eugene S. Edgington,et al.  Randomization Tests , 2011, International Encyclopedia of Statistical Science.

[11]  A. Agresti [A Survey of Exact Inference for Contingency Tables]: Rejoinder , 1992 .

[12]  P. Bolton,et al.  Neuro-epileptic determinants of autism spectrum disorders in tuberous sclerosis complex. , 2002, Brain : a journal of neurology.

[13]  R Fisher,et al.  Design of Experiments , 1936 .

[14]  Gary O. Zerbe,et al.  Randomization Analysis of the Completely Randomized Design Extended to Growth and Response Curves , 1979 .

[15]  G. Jogesh Babu,et al.  Multivariate Permutation Tests , 2002, Technometrics.

[16]  V W Berger,et al.  Pros and cons of permutation tests in clinical trials. , 2000, Statistics in medicine.

[17]  M. Dwass Modified Randomization Tests for Nonparametric Hypotheses , 1957 .

[18]  J. Gentle,et al.  Randomization and Monte Carlo Methods in Biology. , 1990 .

[19]  J. Raz,et al.  Analysis of repeated measurements using nonparametric smoothers and randomization tests. , 1989, Biometrics.

[20]  J. Hannan,et al.  Introduction to probability and mathematical statistics , 1986 .

[21]  David R. Cox The analysis of binary data , 1970 .

[22]  E. Pitman Significance Tests Which May be Applied to Samples from Any Populations , 1937 .

[23]  R. Jennrich Asymptotic Properties of Non-Linear Least Squares Estimators , 1969 .

[24]  D. Basu Randomization Analysis of Experimental Data: The Fisher Randomization Test , 1980 .

[25]  Oscar Kempthorne,et al.  THE RANDOMIZATION THEORY OF' EXPERIMENTAL INFERENCE* , 1955 .

[26]  Georg Heinze,et al.  A permutation test for inference in logistic regression with small‐ and moderate‐sized data sets by D. M. Potter, Statistics in Medicine 2005; 24:693–708 , 2006, Statistics in medicine.

[27]  Peter E. Kennedy,et al.  Randomization tests for multiple regression , 1996 .

[28]  Margaret J. Robertson,et al.  Design and Analysis of Experiments , 2006, Handbook of statistics.

[29]  W. Hauck,et al.  Wald's Test as Applied to Hypotheses in Logit Analysis , 1977 .

[30]  E. Pitman SIGNIFICANCE TESTS WHICH MAY BE APPLIED TO SAMPLES FROM ANY POPULATIONS III. THE ANALYSIS OF VARIANCE TEST , 1938 .

[31]  M. Kenward,et al.  An Introduction to the Bootstrap , 2007 .

[32]  T. E. Doerfler,et al.  The behaviour of some significance tests under experimental randomization , 1969 .

[33]  J. H. Schuenemeyer,et al.  Generalized Linear Models (2nd ed.) , 1992 .

[34]  P. McCullagh,et al.  Generalized Linear Models , 1992 .

[35]  O. Kempthorne Some Aspects of Experimental Inference , 1966 .

[36]  Patricia A. Ganea Contextual factors affect absent reference comprehension in 14-month-olds. , 2005, Child development.

[37]  E. Taylor,et al.  Hyperactivity and reading disability: a longitudinal study of the nature of the association. , 1999, Journal of child psychology and psychiatry, and allied disciplines.

[38]  M. Monuteaux,et al.  Correlates of ADHD among children in pediatric and psychiatric clinics. , 2002, Psychiatric services.

[39]  Nitin R. Patel,et al.  Computing Distributions for Exact Logistic Regression , 1987 .

[40]  A. Albert,et al.  On the existence of maximum likelihood estimates in logistic regression models , 1984 .