Shared Genetic Risk Factors of Intracranial, Abdominal, and Thoracic Aneurysms

Background- — Intracranial aneurysms (IAs), abdominal aortic aneurysms (AAAs), and thoracic aortic aneurysms (TAAs) all have a familial predisposition. Given that aneurysm types are known to co-occur, we hypothesized that there may be shared genetic risk factors for IAs, AAAs, and TAAs. Methods Results- We performed a mega-analysis of 1000 Genomes Project-imputed genome-wide association study (GWAS) data of 4 previously published aneurysm cohorts: 2 IA cohorts (in total 1516 cases, 4305 controls), 1 AAA cohort (818 cases, 3004 controls), and 1 TAA cohort (760 cases, 2212 controls), and observed associations of 4 known IA, AAA, and/or TAA risk loci (9p21, 18q11, 15q21, and 2q33) with consistent effect directions in all 4 cohorts. We calculated polygenic scores based on IA-, AAA-, and TAA-associated SNPs and tested these scores for association to case-control status in the other aneurysm cohorts; this revealed no shared polygenic effects. Similarly, linkage disequilibrium – score regression analyses did not show signi fi cant correlations between any pair of aneurysm subtypes. Last, we evaluated the evidence for 14 previously published aneurysm risk single-nucleotide polymorphisms through collaboration in extended aneurysm cohorts, with a total of 6548 cases and 16 843 controls (IA) and 4391 cases and 37 904 controls (AAA), and found nominally signi fi cant associations for IA risk locus 18q11 near RBBP8 to AAA (odds ratio [OR] = 1.11; P = 4.1 9 10 (cid:1) 5 ) and for TAA risk locus 15q21 near FBN1 to AAA (OR = 1.07; P = 1.1 9 10 (cid:1) 3 ). Conclusions- — Although there was no evidence for polygenic overlap between IAs, AAAs, and TAAs, we found nominally signi fi cant effects of two established risk loci for IAs and TAAs in AAAs. These two loci will require further replication. ( J Am Heart Assoc . aneurysm; PCs, principal components; QC, quality control; SNP, single-nucleotide polymorphism; TAA, thoracic aortic aneurysm.

[1]  M. Daly,et al.  An Atlas of Genetic Correlations across Human Diseases and Traits , 2015, Nature Genetics.

[2]  Marylyn D. Ritchie,et al.  Imputation and quality control steps for combining multiple genome-wide datasets , 2014, Front. Genet..

[3]  H. Kirchner,et al.  Population risk factor estimates for abdominal aortic aneurysm from electronic medical records: a case control study , 2014, BMC Cardiovascular Disorders.

[4]  Daniel L. Koller,et al.  Genome-Wide Association Study of Intracranial Aneurysm Identifies a New Association on Chromosome 7 , 2014 .

[5]  M. Daly,et al.  LD Score regression distinguishes confounding from polygenicity in genome-wide association studies , 2014, Nature Genetics.

[6]  E. Connolly,et al.  The role of vascular remodeling and inflammation in the pathogenesis of intracranial aneurysms , 2014, Journal of Clinical Neuroscience.

[7]  T. Lehtimäki,et al.  High Risk Population Isolate Reveals Low Frequency Variants Predisposing to Intracranial Aneurysms , 2014, PLoS genetics.

[8]  Simon C. Potter,et al.  A Variant in LDLR Is Associated With Abdominal Aortic Aneurysm , 2013, Circulation. Cardiovascular genetics.

[9]  U. Thorsteinsdóttir,et al.  A sequence variant associated with sortilin-1 (SORT1) on 1p13.3 is independently associated with abdominal aortic aneurysm. , 2013, Human molecular genetics.

[10]  John A Elefteriades,et al.  Natural history of thoracic aortic aneurysms: size matters, plus moving beyond size. , 2013, Progress in cardiovascular diseases.

[11]  J. Danesh,et al.  Large-scale association analysis identifies new risk loci for coronary artery disease , 2013 .

[12]  Kenny Q. Ye,et al.  An integrated map of genetic variation from 1,092 human genomes , 2012, Nature.

[13]  O. Delaneau,et al.  A linear complexity phasing method for thousands of genomes , 2011, Nature Methods.

[14]  Yusuke Nakamura,et al.  Common variant near the endothelin receptor type A (EDNRA) gene is associated with intracranial aneurysm risk , 2011, Proceedings of the National Academy of Sciences.

[15]  Simon C. Potter,et al.  Abdominal aortic aneurysm is associated with a variant in low-density lipoprotein receptor-related protein 1. , 2011, American journal of human genetics.

[16]  J. Marchini,et al.  Genotype Imputation with Thousands of Genomes , 2011, G3: Genes | Genomes | Genetics.

[17]  S. Leal,et al.  Genome-wide association study identifies a susceptibility locus for thoracic aortic aneurysms and aortic dissections spanning FBN1 at 15q21.1 , 2011, Nature Genetics.

[18]  S. Shete,et al.  Autosomal dominant inheritance of a predisposition to thoracic aortic aneurysms and dissections and intracranial saccular aneurysms , 2011, American journal of medical genetics. Part A.

[19]  R. Hultgren,et al.  High Frequency of Thoracic Aneurysms in Patients with Abdominal Aortic Aneurysms , 2011, Annals of surgery.

[20]  J. Kaprio,et al.  Genetic Epidemiology of Spontaneous Subarachnoid Hemorrhage: Nordic Twin Study , 2010, Stroke.

[21]  D. Carey,et al.  Novel Genetic Mechanisms for Aortic Aneurysms , 2010, Current atherosclerosis reports.

[22]  Alejandro F. Frangi,et al.  Genome-wide association study of intracranial aneurysm identifies three new risk loci , 2010, Nature genetics.

[23]  J. Powell,et al.  Site Specificity of Aneurysmal Disease , 2010, Circulation.

[24]  P. Visscher,et al.  Common polygenic variation contributes to risk of schizophrenia and bipolar disorder , 2009, Nature.

[25]  Ale Algra,et al.  Changes in case fatality of aneurysmal subarachnoid haemorrhage over time, according to age, sex, and region: a meta-analysis , 2009, The Lancet Neurology.

[26]  Daniel L. Koller,et al.  Genome Screen to Detect Linkage to Common Susceptibility Genes for Intracranial and Aortic Aneurysms , 2009, Stroke.

[27]  Murim Choi,et al.  Susceptibility loci for intracranial aneurysm in European and Japanese populations , 2008, Nature Genetics.

[28]  Tony Fletcher,et al.  Sequence variant on 8q24 confers susceptibility to urinary bladder cancer , 2008, Nature Genetics.

[29]  Manuel A. R. Ferreira,et al.  Practical aspects of imputation-driven meta-analysis of genome-wide association studies. , 2008, Human molecular genetics.

[30]  H. Stefánsson,et al.  The same sequence variant on 9p21 associates with myocardial infarction, abdominal aortic aneurysm and intracranial aneurysm , 2008, Nature Genetics.

[31]  Manuel A. R. Ferreira,et al.  PLINK: a tool set for whole-genome association and population-based linkage analyses. , 2007, American journal of human genetics.

[32]  L. Kiemeney,et al.  Age- and gender-specific reference values of estimated GFR in Caucasians: the Nijmegen Biomedical Study. , 2007, Kidney international.

[33]  Z. Yamagata,et al.  Risk factors for the association of intracranial and aortic aneurysms , 2007, Acta Neurochirurgica.

[34]  D. Milewicz,et al.  Pathogenesis of Thoracic and Abdominal Aortic Aneurysms , 2006, Annals of the New York Academy of Sciences.

[35]  J. Eriksson,et al.  Trajectories of growth among children who have coronary events as adults. , 2005, The New England journal of medicine.

[36]  D. Milewicz,et al.  Familial Aggregation of Both Aortic and Cerebral Aneurysms: Evidence for a Common Genetic Basis in a Subset of Families , 2005, Neurosurgery.

[37]  K. Roeder,et al.  Genomic Control for Association Studies , 1999, Biometrics.

[38]  D. Bergqvist,et al.  Thoracic and thoracoabdominal aortic aneurysm and dissection: An investigation based on autopsy , 1996, The British journal of surgery.

[39]  R Core Team,et al.  R: A language and environment for statistical computing. , 2014 .

[40]  Meike W. Vernooij,et al.  The Rotterdam Study: 2014 objectives and design update , 2013, European Journal of Epidemiology.

[41]  C. Wijmenga,et al.  A comparison of genetic chromosomal loci for intracranial, thoracic aortic, and abdominal aortic aneurysms in search of common genetic risk factors. , 2008, Cardiovascular pathology : the official journal of the Society for Cardiovascular Pathology.

[42]  H. Fodstad,et al.  Co-existence of abdominal aortic aneurysms and intracranial aneurysms , 2005, Acta Neurochirurgica.

[43]  Seppo Koskinen,et al.  HEALTH AND FUNCTIONAL CAPACITY IN FINLAND Baseline Results of the Health 2000 Health Examination Survey , 2004 .

[44]  Pak Chung Sham,et al.  Genetic Power Calculator: design of linkage and association genetic mapping studies of complex traits , 2003, Bioinform..

[45]  M. Lahti-Koski Publications of the National Public Health Institute , 2001 .

[46]  L. A. Anderson Abdominal aortic aneurysm. , 2001, The Journal of cardiovascular nursing.