How do thermophilic proteins deal with heat?
暂无分享,去创建一个
[1] B. Matthews,et al. The conformation of thermolysin. , 1974, The Journal of biological chemistry.
[2] M. Perutz,et al. Stereochemical basis of heat stability in bacterial ferredoxins and in haemoglobin A2 , 1975, Nature.
[3] G J Williams,et al. The Protein Data Bank: a computer-based archival file for macromolecular structures. , 1977, Journal of molecular biology.
[4] G J Williams,et al. The Protein Data Bank: a computer-based archival file for macromolecular structures. , 1978, Archives of biochemistry and biophysics.
[5] P Argos,et al. Thermal stability and protein structure. , 1979, Biochemistry.
[6] W. J. Becktel,et al. Protein stability curves , 1987, Biopolymers.
[7] T. Tsukihara,et al. Tertiary structure of Bacillus thermoproteolyticus [4Fe-4S] ferredoxin. Evolutionary implications for bacterial ferredoxins. , 1988, Journal of molecular biology.
[8] H. Zuber,et al. Temperature adaptation of lactate dehydrogenase. Structural, functional and genetic aspects. , 1988, Biophysical chemistry.
[9] M. Vihinen,et al. Microbial amylolytic enzymes. , 1989, Critical reviews in biochemistry and molecular biology.
[10] P. Evans,et al. Crystal structure of unliganded phosphofructokinase from Escherichia coli. , 1989, Journal of molecular biology.
[11] P. Privalov,et al. Cold Denaturation of Protein , 1990 .
[12] T. Sekiguchi,et al. Protein engineering for thermostability. , 1990, Trends in biotechnology.
[13] H. Muirhead,et al. Structure of a ternary complex of an allosteric lactate dehydrogenase from Bacillus stearothermophilus at 2.5 A resolution. , 1992, Journal of molecular biology.
[14] A. Fersht,et al. Co-operative interactions during protein folding. , 1992, Journal of molecular biology.
[15] L. Joshua-Tor,et al. X‐ray crystal structures of the oxidized and reduced forms of the rubredoxin from the marine hyperthermophilic archaebacterium pyrococcus furiosus , 1992, Protein science : a publication of the Protein Society.
[16] P Glaser,et al. Zinc, a novel structural element found in the family of bacterial adenylate kinases. , 1992, Biochemistry.
[17] M. N. Gupta. Thermostability of enzymes , 1993 .
[18] Paul Singleton,et al. Dictionary of Microbiology and Molecular Biology , 1993 .
[19] W. Steiner,et al. Production of high level of cellulase-free and thermostable xylanase by a wild strain of Thermomyces lanuginosus using beechwood xylan , 1993 .
[20] M. Adams. Enzymes and proteins from organisms that grow near and above 100 degrees C. , 1993, Annual review of microbiology.
[21] Purification, crystallization and preliminary X-ray analysis of inorganic pyrophosphatase from Thermus thermophilus. , 1993, Journal of molecular biology.
[22] J. Nyborg,et al. The crystal structure of elongation factor EF-Tu from Thermus aquaticus in the GTP conformation. , 1993, Structure.
[23] M. Nishiyama,et al. Determinants of protein thermostability observed in the 1.9-A crystal structure of malate dehydrogenase from the thermophilic bacterium Thermus flavus. , 1993, Biochemistry.
[24] B. Tidor,et al. Do salt bridges stabilize proteins? A continuum electrostatic analysis , 1994, Protein science : a publication of the Protein Society.
[25] F. Robb,et al. Life in the pressure cooker: The thermal unfolding of proteins from hyperthermophiles , 1994 .
[26] R. Sauer,et al. Contributions of a hydrogen bond/salt bridge network to the stability of secondary and tertiary structure in λ repressor , 1994, Protein science : a publication of the Protein Society.
[27] C. Pace,et al. Denaturant m values and heat capacity changes: Relation to changes in accessible surface areas of protein unfolding , 1995, Protein science : a publication of the Protein Society.
[28] D. R. Holland,et al. Structural analysis of zinc substitutions in the active site of thermolysin , 1995, Protein science : a publication of the Protein Society.
[29] K. S. Yip,et al. The structure of Pyrococcus furiosus glutamate dehydrogenase reveals a key role for ion-pair networks in maintaining enzyme stability at extreme temperatures. , 1995, Structure.
[30] Robert M. Kelly,et al. ENZYMES FROM MICROORGANISMS IN EXTREME ENVIRONMENTS , 1995 .
[31] J. Frère,et al. Probing the determinants of protein stability: comparison of class A beta-lactamases. , 1995, The Biochemical journal.
[32] Lubbert Dijkhuizen,et al. Crystal Structure at 2.3 Å Resolution and Revised Nucleotide Sequence of the Thermostable Cyclodextrin Glycosyltransferase from Thermoanaerobacterium thermosulfurigenes EM1 , 1996 .
[33] Structure and importance of the dimerization domain in elongation factor Ts from Thermus thermophilus. , 1996, Biochemistry.
[34] R. Sauer,et al. Barriers to protein folding: formation of buried polar interactions is a slow step in acquisition of structure. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[35] E. Querol,et al. Analysis of protein conformational characteristics related to thermostability. , 1996, Protein engineering.
[36] A. Goldman,et al. An unusual route to thermostability disclosed by the comparison of thermus thermophilus and escherichia coli inorganic pyrophosphatases , 1996, Protein science : a publication of the Protein Society.
[37] R. Jaenicke. Glyceraldehyde-3-phosphate dehydrogenase from Thermotoga maritima: strategies of protein stabilization. , 1996, FEMS microbiology reviews.
[38] R. Fleischmann,et al. Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschii , 1996, Science.
[39] M. Billeter,et al. Structural role of a buried salt bridge in the 434 repressor DNA-binding domain. , 1996, Journal of molecular biology.
[40] N. Nomura,et al. Aeropyrum pernix gen. nov., sp. nov., a novel aerobic hyperthermophilic archaeon growing at temperatures up to 100 degrees C. , 1996, International journal of systematic bacteriology.
[41] Tadashi Maruyama,et al. Aeropyrum pernix gen. nov., sp. nov., a Novel Aerobic Hyperthermophilic Archaeon Growing at Temperatures up to 100°C , 1996 .
[42] K. Watanabe,et al. The refined crystal structure of Bacillus cereus oligo-1,6-glucosidase at 2.0 A resolution: structural characterization of proline-substitution sites for protein thermostabilization. , 1997, Journal of molecular biology.
[43] R. Jaenicke,et al. Crystallographic analysis of phosphoglycerate kinase from the hyperthermophilic bacterium Thermotoga maritima. , 1998, Biological chemistry.
[44] A. Elcock,et al. Continuum Solvation Model for Studying Protein Hydration Thermodynamics at High Temperatures , 1997 .
[45] R. Nussinov,et al. Protein binding versus protein folding: the role of hydrophilic bridges in protein associations. , 1997, Journal of molecular biology.
[46] M. Miyagi,et al. Methionine aminopeptidase from the hyperthermophilic Archaeon Pyrococcus furiosus: molecular cloning and overexpression in Escherichia coli of the gene, and characteristics of the enzyme. , 1997, Journal of biochemistry.
[47] S. Englander,et al. Stability and dynamics in a hyperthermophilic protein with melting temperature close to 200°C , 1997 .
[48] G. Church,et al. Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: functional analysis and comparative genomics , 1997, Journal of bacteriology.
[49] S. Kawamura,et al. Contribution of a salt bridge to the thermostability of DNA binding protein HU from Bacillus stearothermophilus determined by site-directed mutagenesis. , 1997, Journal of biochemistry.
[50] R. Wade,et al. Exceptionally stable salt bridges in cytochrome P450cam have functional roles. , 1997, Biochemistry.
[51] R. Fleischmann,et al. The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus , 1997, Nature.
[52] P Argos,et al. Protein thermal stability, hydrogen bonds, and ion pairs. , 1997, Journal of molecular biology.
[53] M Karplus,et al. Dynamics and unfolding pathways of a hyperthermophilic and a mesophilic rubredoxin , 1997, Protein science : a publication of the Protein Society.
[54] R. Huber,et al. The complete genome of the hyperthermophilic bacterium Aquifex aeolicus , 1998, Nature.
[55] R. Ladenstein,et al. Proteins from hyperthermophiles: stability and enzymatic catalysis close to the boiling point of water. , 1998, Advances in biochemical engineering/biotechnology.
[56] A. Karshikoff,et al. Proteins from thermophilic and mesophilic organisms essentially do not differ in packing. , 1998, Protein engineering.
[57] J. Lebbink,et al. Insights into the molecular basis of thermal stability from the analysis of ion-pair networks in the glutamate dehydrogenase family. , 1998, European journal of biochemistry.
[58] J. Reeve,et al. Thermodynamic stability of archaeal histones. , 1998, Biochemistry.
[59] A. Elcock. The stability of salt bridges at high temperatures: implications for hyperthermophilic proteins. , 1998, Journal of molecular biology.
[60] K S Wilson,et al. Conformational stability and thermodynamics of folding of ribonucleases Sa, Sa2 and Sa3. , 1998, Journal of molecular biology.
[61] G. Böhm,et al. The stability of proteins in extreme environments. , 1998, Current opinion in structural biology.
[62] M. Simon,et al. Crystal structures of CheY from Thermotoga maritima do not support conventional explanations for the structural basis of enhanced thermostability , 1998, Protein science : a publication of the Protein Society.
[63] W. Pfeil,et al. Protein Stability and Folding: A Collection of Thermodynamic Data , 1998 .
[64] J. Lebbink,et al. Engineering activity and stability of Thermotoga maritima glutamate dehydrogenase. I. Introduction of a six-residue ion-pair network in the hinge region. , 1998, Journal of molecular biology.
[65] N. Glansdorff,et al. The crystal structure of Pyrococcus furiosus ornithine carbamoyltransferase reveals a key role for oligomerization in enzyme stability at extremely high temperatures. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[66] F. J. Luque,et al. Salt bridge interactions: Stability of the ionic and neutral complexes in the gas phase, in solution, and in proteins , 1998, Proteins.
[67] F. Robb,et al. Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3. , 1998, DNA research : an international journal for rapid publication of reports on genes and genomes.
[68] F. Frolow,et al. Enhanced thermal stability of Clostridium beijerinckii alcohol dehydrogenase after strategic substitution of amino acid residues with prolines from the homologous thermophilic Thermoanaerobacter brockii alcohol dehydrogenase , 1998, Protein science : a publication of the Protein Society.
[69] R. Nussinov,et al. Folding funnels and binding mechanisms. , 1999, Protein engineering.
[70] S. Salzberg,et al. Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima , 1999, Nature.
[71] B K Shoichet,et al. Comparing the thermodynamic stabilities of a related thermophilic and mesophilic enzyme. , 1999, Biochemistry.
[72] A. Cooper,et al. Thermodynamic analysis of biomolecular interactions. , 1999, Current opinion in chemical biology.
[73] G. Makhatadze,et al. Engineering a thermostable protein via optimization of charge-charge interactions on the protein surface. , 1999, Biochemistry.
[74] R. Jaenicke,et al. Thermodynamics of the unfolding of the cold-shock protein from Thermotoga maritima. , 1999, Journal of molecular biology.
[75] R. Jaenicke,et al. Does the elimination of ion pairs affect the thermal stability of cold shock protein from the hyperthermophilic bacterium Thermotoga maritima? , 1999, FEBS letters.
[76] R. Nussinov,et al. Salt bridge stability in monomeric proteins. , 1999, Journal of molecular biology.
[77] B Honig,et al. Electrostatic contributions to the stability of hyperthermophilic proteins. , 1999, Journal of molecular biology.
[78] R. Varadarajan,et al. Prediction of the maximal stability temperature of monomeric globular proteins solely from amino acid sequence , 1999, FEBS letters.
[79] Kevin L. Shaw,et al. Increasing protein stability by altering long‐range coulombic interactions , 1999, Protein science : a publication of the Protein Society.
[80] S. Marqusee,et al. Structural distribution of stability in a thermophilic enzyme. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[81] M. Gromiha,et al. Important amino acid properties for enhanced thermostability from mesophilic to thermophilic proteins. , 1999, Biophysical chemistry.
[82] S. Marqusee,et al. A thermodynamic comparison of mesophilic and thermophilic ribonucleases H. , 1999, Biochemistry.
[83] D Eisenberg,et al. Transproteomic evidence of a loop-deletion mechanism for enhancing protein thermostability. , 1999, Journal of molecular biology.
[84] R. Nussinov,et al. Folding funnels, binding funnels, and protein function , 1999, Protein science : a publication of the Protein Society.
[85] K. Kirschner,et al. The hyperthermostable indoleglycerol phosphate synthase from Thermotoga maritima is destabilized by mutational disruption of two solvent-exposed salt bridges. , 1999, Journal of molecular biology.
[86] G. Olsen,et al. Thermal adaptation analyzed by comparison of protein sequences from mesophilic and extremely thermophilic Methanococcus species. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[87] J A McCammon,et al. Molecular dynamics simulations of the hyperthermophilic protein sac7d from Sulfolobus acidocaldarius: contribution of salt bridges to thermostability. , 1999, Journal of molecular biology.
[88] R. Nussinov,et al. Folding and binding cascades: Dynamic landscapes and population shifts , 2008, Protein science : a publication of the Protein Society.
[89] A. Szilágyi,et al. Structural differences between mesophilic, moderately thermophilic and extremely thermophilic protein subunits: results of a comprehensive survey. , 2000, Structure.
[90] S L Mayo,et al. Contribution of surface salt bridges to protein stability. , 2000, Biochemistry.
[91] U Mueller,et al. Thermal stability and atomic-resolution crystal structure of the Bacillus caldolyticus cold shock protein. , 2000, Journal of molecular biology.
[92] R. Nussinov,et al. Electrostatic strengths of salt bridges in thermophilic and mesophilic glutamate dehydrogenase monomers , 2000, Proteins.
[93] Kevin L. Shaw,et al. Linear extrapolation method of analyzing solvent denaturation curves , 2000, Proteins.
[94] R. Varadarajan,et al. Elucidation of determinants of protein stability through genome sequence analysis , 2000, FEBS letters.
[95] K. P. Murphy,et al. Structural energetics of protein folding and binding. , 2000, Current opinion in biotechnology.
[96] C. Cambillau,et al. Structural and Genomic Correlates of Hyperthermostability* , 2000, The Journal of Biological Chemistry.
[97] R. Norel,et al. Electrostatic aspects of protein-protein interactions. , 2000, Current opinion in structural biology.
[98] C. Pace. Single surface stabilizer , 2000, Nature Structural Biology.
[99] J. Reeve,et al. Mutational Analysis of Differences in Thermostability between Histones from Mesophilic and Hyperthermophilic Archaea , 2000, Journal of bacteriology.
[100] M. Lehmann,et al. The consensus concept for thermostability engineering of proteins. , 2000, Biochimica et biophysica acta.
[101] G. Makhatadze,et al. Contribution of proton linkage to the thermodynamic stability of the major cold‐shock protein of Escherichia coli CspA , 2008, Protein science : a publication of the Protein Society.
[102] A. Goldman,et al. Buried charged surface in proteins. , 2000, Structure.
[103] R. Jaenicke,et al. Do ultrastable proteins from hyperthermophiles have high or low conformational rigidity? , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[104] B. Tidor,et al. Rational modification of protein stability by the mutation of charged surface residues. , 2000, Biochemistry.
[105] J. Zhang,et al. Protein-length distributions for the three domains of life. , 2000, Trends in genetics : TIG.
[106] Udo Heinemann,et al. Two exposed amino acid residues confer thermostability on a cold shock protein , 2000, Nature Structural Biology.
[107] R. Nussinov,et al. Factors enhancing protein thermostability. , 2000, Protein engineering.
[108] Dmitrij Frishman,et al. The genome sequence of the thermoacidophilic scavenger Thermoplasma acidophilum , 2000, Nature.
[109] K Watanabe,et al. Archaeal adaptation to higher temperatures revealed by genomic sequence of Thermoplasma volcanium. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[110] R. Nussinov,et al. Fluctuations between stabilizing and destabilizing electrostatic contributions of ion pairs in conformers of the c‐Myc‐Max leucine zipper , 2000, Proteins.
[111] R. Huber,et al. Towards the ecology of hyperthermophiles: biotopes, new isolation strategies and novel metabolic properties. , 2000, FEMS microbiology reviews.
[112] Nikos Kyrpides,et al. Genomes OnLine Database (GOLD): a monitor of genome projects world-wide , 2001, Nucleic Acids Res..
[113] R. Sterner,et al. Thermophilic Adaptation of Proteins , 2001, Critical reviews in biochemistry and molecular biology.
[114] S. Sligar,et al. Understanding thermostability in cytochrome P450 by combinatorial mutagenesis , 2001, Protein science : a publication of the Protein Society.
[115] S. Kunugi,et al. Cold denaturation of proteins under high pressure. , 2002, Biochimica et biophysica acta.