Emerging DNA sequencing technologies for human genomic medicine.
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[1] F. Sanger,et al. DNA sequencing with chain-terminating inhibitors. , 1977, Proceedings of the National Academy of Sciences of the United States of America.
[2] G. Church,et al. Polony Multiplex Analysis of Gene Expression (PMAGE) in Mouse Hypertrophic Cardiomyopathy , 2007, Science.
[3] Vincent J. Magrini,et al. Extending assembly of short DNA sequences to handle error , 2007, Bioinform..
[4] Susan M. Huse,et al. Accuracy and quality of massively parallel DNA pyrosequencing , 2007, Genome Biology.
[5] J. V. Moran,et al. Initial sequencing and analysis of the human genome. , 2001, Nature.
[6] Timothy B. Stockwell,et al. The Diploid Genome Sequence of an Individual Human , 2007, PLoS biology.
[7] Stanley Fields,et al. Site-Seeing by Sequencing , 2007, Science.
[8] D. Dressman,et al. Transforming single DNA molecules into fluorescent magnetic particles for detection and enumeration of genetic variations , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[9] James R. Knight,et al. Genome sequencing in microfabricated high-density picolitre reactors , 2005, Nature.
[10] S. Quake,et al. Sequence information can be obtained from single DNA molecules , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[11] Peng Wang,et al. Regulation of Cdx2 expression by promoter methylation, and effects of Cdx2 transfection on morphology and gene expression of human esophageal epithelial cells. , 2006, Carcinogenesis.
[12] Dustin E. Schones,et al. High-Resolution Profiling of Histone Methylations in the Human Genome , 2007, Cell.
[13] Jay Shendure,et al. Fluorescent in situ sequencing on polymerase colonies. , 2003, Analytical biochemistry.
[14] Richard A Mathies,et al. Microfabricated bioprocessor for integrated nanoliter-scale Sanger DNA sequencing. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[15] J. Gillespie,et al. Identification of a unique epigenetic sub‐microenvironment in prostate cancer , 2007, The Journal of pathology.
[16] Neil Hall,et al. Advanced sequencing technologies and their wider impact in microbiology , 2007, Journal of Experimental Biology.
[17] René L. Warren,et al. Assembling millions of short DNA sequences using SSAKE , 2006, Bioinform..
[18] C. T. Farley,et al. Accurate Multiplex Polony Sequencing of an Evolved Bacterial Genome , 2008 .
[19] Le Kang,et al. LocustDB: a relational database for the transcriptome and biology of the migratory locust (Locusta migratoria) , 2006, BMC Genomics.
[20] K. Hopkins,et al. Rapid detection of gyrA and parC mutations in quinolone-resistant Salmonella enterica using Pyrosequencing technology. , 2007, Journal of microbiological methods.
[21] G. Church,et al. Quantitative monitoring by polymerase colony assay of known mutations resistant to ABL kinase inhibitors , 2008, Oncogene.
[22] J. Hoheisel,et al. Monitoring methylation changes in cancer. , 2007, Advances in biochemical engineering/biotechnology.
[23] Y. Goekoop-Ruiterman,et al. Exploratory analysis of four polymorphisms in human GGH and FPGS genes and their effect in methotrexate-treated rheumatoid arthritis patients. , 2007, Pharmacogenomics.
[24] I. Gut,et al. Expressional and Epigenetic Alterations of Placental Serine Protease Inhibitors: SERPINA3 Is a Potential Marker of Preeclampsia , 2007, Hypertension.
[25] Lloyd M. Smith,et al. Fluorescence detection in automated DNA sequence analysis , 1986, Nature.
[26] C. Kai,et al. CAGE: cap analysis of gene expression , 2006, Nature Methods.
[27] J. M. Prober,et al. A system for rapid DNA sequencing with fluorescent chain-terminating dideoxynucleotides. , 1987, Science.
[28] Michael Q. Zhang,et al. Using quality scores and longer reads improves accuracy of Solexa read mapping , 2008, BMC Bioinformatics.
[29] Jay Shendure,et al. Multiplex amplification of large sets of human exons , 2007, Nature Methods.
[30] Steven J. M. Jones,et al. BMC Genomics BioMed Central Methodology article , 2006 .
[31] Philip M. Kim,et al. Paired-End Mapping Reveals Extensive Structural Variation in the Human Genome , 2007, Science.
[32] M. Hudson,et al. Global repeat discovery and estimation of genomic copy number in a large, complex genome using a high-throughput 454 sequence survey , 2007, BMC Genomics.
[33] D. Deamer,et al. Nanopores and nucleic acids: prospects for ultrarapid sequencing. , 2000, Trends in biotechnology.
[34] M Ronaghi,et al. Analyses of secondary structures in DNA by pyrosequencing. , 1999, Analytical biochemistry.
[35] Allen D. Delaney,et al. Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing , 2007, Nature Methods.
[36] L. Hou,et al. Changes in DNA methylation patterns in subjects exposed to low-dose benzene. , 2007, Cancer research.
[37] M. Uhlén,et al. Solid phase DNA minisequencing by an enzymatic luminometric inorganic pyrophosphate detection assay. , 1993, Analytical biochemistry.
[38] W. Lichtenegger,et al. Polymorphism of IL-1α, IL-1β and IL-10 in patients with advanced ovarian cancer: Results of a prospective study with 147 patients , 2007 .
[39] J. Barnwell,et al. Pyrosequencing, a High-Throughput Method for Detecting Single Nucleotide Polymorphisms in the Dihydrofolate Reductase and Dihydropteroate Synthetase Genes of Plasmodium falciparum , 2006, Journal of Clinical Microbiology.
[40] A. Kerlavage,et al. Complementary DNA sequencing: expressed sequence tags and human genome project , 1991, Science.
[41] C. Heiner,et al. Rapid and reliable fluorescent cycle sequencing of double-stranded templates. , 1992, DNA sequence : the journal of DNA sequencing and mapping.
[42] B. Evengård,et al. Rapid genotyping of Toxoplasma gondii by pyrosequencing. , 2007, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.
[43] C. Heiner,et al. New energy transfer dyes for DNA sequencing. , 1997, Nucleic acids research.
[44] A B Chetverin,et al. Cloning of RNA molecules in vitro. , 1993, Nucleic acids research.
[45] A. Mortazavi,et al. Genome-Wide Mapping of in Vivo Protein-DNA Interactions , 2007, Science.
[46] Jay Shendure,et al. Long-range polony haplotyping of individual human chromosome molecules , 2006, Nature Genetics.
[47] T. Mikkelsen,et al. Genome-wide maps of chromatin state in pluripotent and lineage-committed cells , 2007, Nature.
[48] Eugene W. Myers,et al. A whole-genome assembly of Drosophila. , 2000, Science.
[49] Jun Yao,et al. SAGE and related approaches for cancer target identification. , 2006, Drug discovery today.
[50] D. Bentley,et al. Whole-genome re-sequencing. , 2006, Current opinion in genetics & development.
[51] M. Ronaghi,et al. PCR-introduced loop structure as primer in DNA sequencing. , 1998, BioTechniques.
[52] Zhaohui S. Qin,et al. A second generation human haplotype map of over 3.1 million SNPs , 2007, Nature.
[53] D. Mccormick. Sequence the Human Genome , 1986, Bio/Technology.
[54] D. Barker,et al. Implementation of a capillary array electrophoresis instrument. , 1996, Journal of capillary electrophoresis.
[55] C. Nusbaum,et al. Quality scores and SNP detection in sequencing-by-synthesis systems. , 2008, Genome research.
[56] Thomas LaFramboise,et al. Sensitive mutation detection in heterogeneous cancer specimens by massively parallel picoliter reactor sequencing , 2006, Nature Medicine.
[57] R A Mathies,et al. Fluorescence energy transfer dye-labeled primers for DNA sequencing and analysis. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[58] B. Haas,et al. Sequencing Medicago truncatula expressed sequenced tags using 454 Life Sciences technology , 2006, BMC Genomics.
[59] Stanley Fields. Molecular biology. Site-seeing by sequencing. , 2007, Science.
[60] E. D. Hyman. A new method of sequencing DNA. , 1988, Analytical biochemistry.
[61] W. Gilbert,et al. A new method for sequencing DNA. , 1977, Proceedings of the National Academy of Sciences of the United States of America.
[62] A. Rich,et al. The rise of single-molecule DNA biochemistry. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[63] Kenta Nakai,et al. DBTSS: database of transcription start sites, progress report 2008 , 2007, Nucleic Acids Res..
[64] Christoph Heller,et al. A fully automated multicapillary electrophoresis device for DNA analysis , 1999 .
[65] G. Heinze,et al. Vascular Endothelial Growth Factor Gene Polymorphisms Are Associated with Prognosis in Ovarian Cancer , 2007, Clinical Cancer Research.
[66] J. Lupski,et al. The complete genome of an individual by massively parallel DNA sequencing , 2008, Nature.
[67] A. Halpern,et al. A Sanger/pyrosequencing hybrid approach for the generation of high-quality draft assemblies of marine microbial genomes. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[68] P. Green,et al. Base-calling of automated sequencer traces using phred. I. Accuracy assessment. , 1998, Genome research.
[69] D. Barker,et al. DNA sequencing by capillary electrophoresis with a hydroxyethylcellulose sieving buffer. , 1996, Applied and theoretical electrophoresis : the official journal of the International Electrophoresis Society.
[70] S. Turner,et al. Zero-Mode Waveguides for Single-Molecule Analysis at High Concentrations , 2003, Science.
[71] Harald Seitz,et al. Analytics of protein-DNA interactions , 2006 .