Modeling microtubule cytoskeleton via an active liquid crystal elastomer model

In this work, a three-dimensional (3D) liquid crystal polymer model is developed to model the microtubule cytoskeleton aggregate and to study its interaction with the extracellular matrix. In the proposed microtubule cytoskeleton model, the cytoskeleton aggregate is treated as a homogenized liquid crystal elastomer medium, with an extra active stress term included to account for the effect of the active process of Guanosine Triphosphate (GTP) hydrolysis. The cell extracellular matrix (ECM) is modeled as a hyperelastic material. The specific and non-specific interactions between the cell and its ECM are modeled by a Coarse-Grained Contact Model. Surface tension effects are incorporated into the simulation, through a Multiscale Dynamic Wetting Model, to account for the interface conditions between the cell and its surrounding environment. The cell model is implemented in a Lagrange type Galerkin formulation. The numerical results show that the cell can sense and move under the gradient of matrix elasticity.

[1]  Jay X Tang,et al.  Continuous isotropic-nematic liquid crystalline transition of F-actin solutions. , 2003, Physical review. E, Statistical, nonlinear, and soft matter physics.

[2]  Li,et al.  Moving least-square reproducing kernel methods (I) Methodology and convergence , 1997 .

[3]  P Bongrand,et al.  Cell adhesion. Competition between nonspecific repulsion and specific bonding. , 1984, Biophysical journal.

[4]  Joyce Y. Wong,et al.  Directed Movement of Vascular Smooth Muscle Cells on Gradient-Compliant Hydrogels† , 2003 .

[5]  Suresh Narayanan,et al.  Orientational order parameter of the nematic liquid crystalline phase of F-actin. , 2005, Physical review. E, Statistical, nonlinear, and soft matter physics.

[6]  E. Fried,et al.  Striping of nematic elastomers , 2002 .

[7]  S. Sen,et al.  Matrix Elasticity Directs Stem Cell Lineage Specification , 2006, Cell.

[8]  Jacques Prost,et al.  Active gels as a description of the actin‐myosin cytoskeleton , 2009, HFSP journal.

[9]  P. Eklund,et al.  Electronic properties of semiconductor nanowires. , 2008, Journal of nanoscience and nanotechnology.

[10]  D. Discher,et al.  Optimal matrix rigidity for stress fiber polarization in stem cells. , 2010, Nature physics.

[11]  Sitikantha Roy,et al.  A computational biomimetic study of cell crawling , 2010, Biomechanics and modeling in mechanobiology.

[12]  Gregory P. Crawford,et al.  Liquid-crystal materials find a new order in biomedical applications. , 2007, Nature materials.

[13]  W. Helfrich Elastic Properties of Lipid Bilayers: Theory and Possible Experiments , 1973, Zeitschrift fur Naturforschung. Teil C: Biochemie, Biophysik, Biologie, Virologie.

[14]  J. Yeomans,et al.  Spontaneous flow states in active nematics: A unified picture , 2008, 0811.3432.

[15]  J. Joanny,et al.  Contractility and retrograde flow in lamellipodium motion , 2006, Physical biology.

[16]  Isaac Fried,et al.  A note on elastic energy density functions for largely deformed compressible rubber solids , 1988 .

[17]  Shaofan Li,et al.  Modelling and simulation of substrate elasticity sensing in stem cells , 2011, Computer methods in biomechanics and biomedical engineering.

[18]  Shaofan Li,et al.  Multiscale modeling and simulation of soft adhesion and contact of stem cells. , 2011, Journal of the mechanical behavior of biomedical materials.

[19]  Morton E. Gurtin,et al.  A continuum theory of elastic material surfaces , 1975 .

[20]  Shaofan Li,et al.  A three dimensional soft matter cell model for mechanotransduction , 2012 .

[21]  Paul A. Janmey,et al.  Non-Linear Elasticity of Extracellular Matrices Enables Contractile Cells to Communicate Local Position and Orientation , 2009, PloS one.

[22]  E. M. Terentjev,et al.  Liquid Crystal Elastomers , 2003 .

[23]  Huafeng Liu,et al.  Meshfree Particle Methods , 2004 .

[24]  M. Chiang,et al.  Cell morphology and migration linked to substrate rigidity. , 2007, Soft matter.

[25]  G. I. Bell Models for the specific adhesion of cells to cells. , 1978, Science.

[26]  Morton E. Gurtin,et al.  Surface stress in solids , 1978 .

[27]  U. Schwarz,et al.  Soft matters in cell adhesion: rigidity sensing on soft elastic substrates. , 2007, Soft matter.

[28]  Zhihao Shen,et al.  Liquid Crystalline Polymers , 2004 .

[29]  Erwan Verron,et al.  Comparison of Hyperelastic Models for Rubber-Like Materials , 2006 .

[30]  F. Vernerey,et al.  A constrained mixture approach to mechano-sensing and force generation in contractile cells. , 2011, Journal of the mechanical behavior of biomedical materials.

[31]  Roger A. Sauer,et al.  An atomic interaction-based continuum model for adhesive contact mechanics , 2007 .

[32]  O. Thoumine,et al.  Predicting the kinetics of cell spreading. , 2002, Journal of biomechanics.

[33]  Roger A. Sauer,et al.  A contact mechanics model for quasi‐continua , 2007 .

[34]  Frank Jülicher,et al.  Active behavior of the Cytoskeleton , 2007 .

[35]  Shaofan Li,et al.  Multiscale modeling and simulation of dynamic wetting , 2014 .

[36]  J. Joanny,et al.  Generic theory of active polar gels: a paradigm for cytoskeletal dynamics , 2004, The European physical journal. E, Soft matter.