The mitochondrial genome of Arthrinium arundinis and its phylogenetic position within Sordariomycetes.

[1]  P. Gupta,et al.  Characterization of codon usage pattern and influencing factors in Japanese encephalitis virus. , 2016, Virus research.

[2]  Patricia P. Chan,et al.  tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes , 2016, Nucleic Acids Res..

[3]  F. Selçuk,et al.  The Faces of Fungi database: fungal names linked with morphology, phylogeny and human impacts , 2015, Fungal Diversity.

[4]  G. Sung,et al.  Complete mitochondrial genome of the entomopathogenic fungus Beauveria pseudobassiana (Ascomycota, Cordycipitaceae) , 2015, Mitochondrial DNA.

[5]  G. Sung.  Complete mitochondrial DNA genome of the medicinal mushroom Cordyceps militaris (Ascomycota, Cordycipitaceae) , 2015, Mitochondrial DNA.

[6]  P. Kirk,et al.  Towards a natural classification and backbone tree for Sordariomycetes , 2015, Fungal Diversity.

[7]  A. Vogler,et al.  Comparing the effectiveness of metagenomics and metabarcoding for diet analysis of a leaf‐feeding monkey (Pygathrix nemaeus) , 2015, Molecular ecology resources.

[8]  Xiaoyi Wei,et al.  Arthpyrones A-C, pyridone alkaloids from a sponge-derived fungus Arthrinium arundinis ZSDS1-F3. , 2015, Organic Letters.

[9]  Yonghong Liu,et al.  Cytotoxic Cytochalasins from Marine-Derived Fungus Arthrinium arundinis , 2015, Planta Medica.

[10]  D. Zafari,et al.  FIRST REPORT OF LEAF SPOT CAUSED BY ARTHRINIUM ARUNDINIS ON ROSEMARY IN IRAN , 2014 .

[11]  X.Q. Wu,et al.  First Report of Brown Culm Streak of Phyllostachys praecox Caused by Arthrinium arundinis in Nanjing, China. , 2014, Plant disease.

[12]  R. Shao,et al.  Accepted manuscript , 2019 .

[13]  Oliver N. Ross,et al.  High Variability of Mitochondrial Gene Order among Fungi , 2014, Genome biology and evolution.

[14]  F. Delsuc,et al.  Next-generation sequencing and phylogenetic signal of complete mitochondrial genomes for resolving the evolutionary history of leaf-nosed bats (Phyllostomidae). , 2013, Molecular phylogenetics and evolution.

[15]  P. Crous,et al.  A phylogenetic re-evaluation of Arthrinium , 2013, IMA fungus.

[16]  L. Bachmann,et al.  Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads—a baiting and iterative mapping approach , 2013, Nucleic acids research.

[17]  Marc Lohse,et al.  OrganellarGenomeDRAW—a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets , 2013, Nucleic Acids Res..

[18]  P. Mieczkowski,et al.  Global analyses of Ceratocystis cacaofunesta mitochondria: from genome to proteome , 2013, BMC Genomics.

[19]  W. Sande.  Phylogenetic analysis of the complete mitochondrial genome of Madurella mycetomatis confirms its taxonomic position within the order Sordariales. , 2012 .

[20]  Sergey I. Nikolenko,et al.  SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing , 2012, J. Comput. Biol..

[21]  Maxim Teslenko,et al.  MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space , 2012, Systematic biology.

[22]  Guo-Hua Liu,et al.  Comparative analyses of the complete mitochondrial genomes of Ascaris lumbricoides and Ascaris suum from humans and pigs. , 2012, Gene.

[23]  S. Said,et al.  Antimicrobial activity from endophytic fungi Arthrinium state of Apiospora montagnei Sacc. and Papulaspora immersa , 2010 .

[24]  Kevin P. Byrne,et al.  Additions, Losses, and Rearrangements on the Evolutionary Route from a Reconstructed Ancestor to the Modern Saccharomyces cerevisiae Genome , 2009, PLoS genetics.

[25]  M. A. Typas,et al.  The complete mitochondrial genome of Fusarium oxysporum: insights into fungal mitochondrial evolution. , 2008, Gene.

[26]  F. Vicente,et al.  Enhancement of antibiotic and secondary metabolite detection from filamentous fungi by growth on nutritional arrays , 2008, Journal of applied microbiology.

[27]  Rodrigo Lopez,et al.  Clustal W and Clustal X version 2.0 , 2007, Bioinform..

[28]  Alexandros Stamatakis,et al.  RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models , 2006, Bioinform..

[29]  M. A. Typas,et al.  The complete mitochondrial genome of the vascular wilt fungus Verticillium dahliae: a novel gene order for Verticillium and a diagnostic tool for species identification , 2006, Current Genetics.

[30]  M. A. Typas,et al.  The complete mitochondrial genome of the entomopathogenic fungus Metarhizium anisopliae var. anisopliae: gene order and trn gene clusters reveal a common evolutionary course for all Sordariomycetes, while intergenic regions show variation , 2006, Archives of Microbiology.

[31]  M. A. Typas,et al.  The analysis of the complete mitochondrial genome of Lecanicillium muscarium (synonym Verticillium lecanii) suggests a minimum common gene organization in mtDNAs of Sordariomycetes: phylogenetic implications. , 2004, Fungal genetics and biology : FG & B.

[32]  P. Foster,et al.  The complete mitochondrial genome of a turbinid vetigastropod from MiSeq Illumina sequencing of genomic DNA and steps towards a resolved gastropod phylogeny. , 2014, Gene.

[33]  K. Hyde,et al.  The Xylariales: A monophyletic order containing 7 families , 2003 .

[34]  David Posada,et al.  MODELTEST: testing the model of DNA substitution , 1998, Bioinform..