Antimicrobial peptides: premises and promises.

Antimicrobial peptides (AMPs) are an important component of the natural defences of most living organisms against invading pathogens. These are relatively small (< 10kDa), cationic and amphipathic peptides of variable length, sequence and structure. During the past two decades several AMPs have been isolated from a wide variety of animals, both vertebrates and invertebrates, and plants as well as from bacteria and fungi. Most of these peptides are obtained from different sources like macrophages, neutrophils, epithelial cells, haemocytes, fat body, reproductive tract, etc. These peptides exhibit broad-spectrum activity against a wide range of microorganisms including Gram-positive and Gram-negative bacteria, protozoa, yeast, fungi and viruses. A few peptides have also been found to be cytotoxic to sperm and tumour cells. AMPs are classified based on the three dimensional structural studies carried out with the help of NMR. The peptides are broadly classified into five major groups namely (a) peptides that form alpha-helical structures, (b) peptides rich in cysteine residues, (c) peptides that form beta-sheet, (d) peptides rich in regular amino acids namely histatin, arginine and proline and (e) peptides composed of rare and modified amino acids. Most of these peptides are believed to act by disrupting the plasma membrane leading to the lysis of the cell. AMPs have been found to be excellent candidates for developing novel antimicrobial agents and a few of these peptides show antimicrobial activity against pathogens causing sexually transmitted infection (STI), including HIV/HSV. Peptides, namely magainin and nisin have been shown to demonstrate contraceptive properties in vitro and in vivo. A few peptides have already entered clinical trials for the treatment of impetigo, diabetic foot ulcers and gastric helicobacter infections. In this review, we discuss the source, structures and mode of action with special reference to therapeutic considerations of various AMPs.

[1]  Wayne L. Smith,et al.  Purification, primary structures, and antibacterial activities of β-defensins, a new family of antimicrobial peptides from bovine neutrophils. , 1996, The Journal of Biological Chemistry.

[2]  H. I. Zeya,et al.  Cationic Proteins of Polymorphonuclear Leukocyte Lysosomes I. Resolution of Antibacterial and Enzymatic Activities , 1966, Journal of bacteriology.

[3]  R. Gennaro,et al.  The Cathelicidin Family of Antimicrobial Peptide Precursors: A Component of the Oxygen‐Independent Defense Mechanisms of Neutrophils a , 1997, Annals of the New York Academy of Sciences.

[4]  H. Horstmann,et al.  Bactenecins, defense polypeptides of bovine neutrophils, are generated from precursor molecules stored in the large granules , 1990, The Journal of cell biology.

[5]  D. Hultmark,et al.  Sequence and specificity of two antibacterial proteins involved in insect immunity , 1981, Nature.

[6]  D. Kohda,et al.  A comparative study of the solution structures of tachyplesin I and a novel anti-HIV synthetic peptide, T22 ([Tyr5,12, Lys7]-polyphemusin II), determined by nuclear magnetic resonance. , 1993, Biochimica et biophysica acta.

[7]  M. Zasloff Antimicrobial peptides of multicellular organisms , 2002, Nature.

[8]  D. Hultmark Drosophila immunity: paths and patterns. , 2003, Current opinion in immunology.

[9]  V. Mutt,et al.  Amino acid sequence of PR-39. Isolation from pig intestine of a new member of the family of proline-arginine-rich antibacterial peptides. , 1991, European journal of biochemistry.

[10]  T. Lüders,et al.  Strong Synergy between a Eukaryotic Antimicrobial Peptide and Bacteriocins from Lactic Acid Bacteria , 2003, Applied and Environmental Microbiology.

[11]  D. Barra,et al.  Amphibian skin: a promising resource for antimicrobial peptides. , 1995, Trends in biotechnology.

[12]  Y. Toh,et al.  Antimicrobial tachyplesin peptide precursor. cDNA cloning and cellular localization in the horseshoe crab (Tachypleus tridentatus). , 1990, The Journal of biological chemistry.

[13]  R. Hancock Antibacterial peptides and the outer membranes of gram-negative bacilli. , 1997, Journal of medical microbiology.

[14]  K. Wüthrich NMR of proteins and nucleic acids , 1988 .

[15]  R. Gennaro,et al.  Purification, composition, and activity of two bactenecins, antibacterial peptides of bovine neutrophils , 1989, Infection and immunity.

[16]  A. Bax,et al.  A two‐dimensional NMR study of the antimicrobial peptide magainin 2 , 1988, FEBS Letters.

[17]  R. Gennaro,et al.  Comparative in vitro activity of five cathelicidin-derived synthetic peptides against Leptospira, Borrelia and Treponema pallidum. , 2002, The Journal of antimicrobial chemotherapy.

[18]  F. Bossa,et al.  Antimicrobial peptides from skin secretions of Rana esculenta. Molecular cloning of cDNAs encoding esculentin and brevinins and isolation of new active peptides. , 1994, The Journal of biological chemistry.

[19]  D. Eisenberg,et al.  Crystal structure of defensin HNP-3, an amphiphilic dimer: mechanisms of membrane permeabilization. , 1991, Science.

[20]  S. Kawabata,et al.  New types of clotting factors and defense molecules found in horseshoe crab hemolymph: their structures and functions. , 1998, Journal of biochemistry.

[21]  P. Meherji,et al.  Spermicidal activity of Magainins: in vitro and in vivo studies. , 1996, Contraception.

[22]  P. Elsbach What is the real role of antimicrobial polypeptides that can mediate several other inflammatory responses? , 2003, The Journal of clinical investigation.

[23]  F. Barchiesi,et al.  In-vitro activity of cationic peptides alone and in combination with clinically used antimicrobial agents against Pseudomonas aeruginosa. , 1999, The Journal of antimicrobial chemotherapy.

[24]  L. Goffi,et al.  Polycationic Peptides as Prophylactic Agents against Methicillin-Susceptible or Methicillin-Resistant Staphylococcus epidermidis Vascular Graft Infection , 2000, Antimicrobial Agents and Chemotherapy.

[25]  J. Odeberg,et al.  FALL-39, a putative human peptide antibiotic, is cysteine-free and expressed in bone marrow and testis. , 1995, Proceedings of the National Academy of Sciences of the United States of America.

[26]  M. Zasloff,et al.  Magainins, a class of antimicrobial peptides from Xenopus skin: isolation, characterization of two active forms, and partial cDNA sequence of a precursor , 1987 .

[27]  F C Kafatos,et al.  Phylogenetic perspectives in innate immunity. , 1999, Science.

[28]  H. Vogel,et al.  Three-dimensional solution structure of lactoferricin B, an antimicrobial peptide derived from bovine lactoferrin. , 1998, Biochemistry.

[29]  R I Lehrer,et al.  Antimicrobial peptides in mammalian and insect host defence. , 1999, Current opinion in immunology.

[30]  N. Fujii,et al.  Interactions of an antimicrobial peptide, magainin 2, with outer and inner membranes of Gram-negative bacteria. , 1997, Biochimica et biophysica acta.

[31]  Y. Shai,et al.  Mechanism of the binding, insertion and destabilization of phospholipid bilayer membranes by alpha-helical antimicrobial and cell non-selective membrane-lytic peptides. , 1999, Biochimica et biophysica acta.

[32]  S J Ludtke,et al.  Membrane pores induced by magainin. , 1996, Biochemistry.

[33]  G M Anantharamaiah,et al.  Molecular basis for prokaryotic specificity of magainin-induced lysis. , 1995, Biochemistry.

[34]  A. Ouellette,et al.  Paneth cell defensins and innate immunity of the small bowel. , 2001, Inflammatory bowel diseases.

[35]  A. Mor Peptide‐based antibiotics: A potential answer to raging antimicrobial resistance , 2000 .

[36]  F. Kafatos,et al.  Molecular immune responses of the mosquito Anopheles gambiae to bacteria and malaria parasites. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[37]  E. Dalmasso,et al.  Contribution of Human α-Defensin 1, 2, and 3 to the Anti-HIV-1 Activity of CD8 Antiviral Factor , 2002, Science.

[38]  J. Vederas,et al.  Three-dimensional structure of leucocin A in trifluoroethanol and dodecylphosphocholine micelles: spatial location of residues critical for biological activity in type IIa bacteriocins from lactic acid bacteria. , 1997, Biochemistry.

[39]  T. Ganz,et al.  Antimicrobial defensin peptides form voltage-dependent ion-permeable channels in planar lipid bilayer membranes. , 1990, Proceedings of the National Academy of Sciences of the United States of America.

[40]  R. Hancock,et al.  Improved activity of a synthetic indolicidin analog , 1997, Antimicrobial agents and chemotherapy.

[41]  D. Hultmark,et al.  Insect immunity. Attacins, a family of antibacterial proteins from Hyalophora cecropia. , 1983, The EMBO journal.

[42]  K. Matsuzaki Why and how are peptide-lipid interactions utilized for self-defense? Magainins and tachyplesins as archetypes. , 1999, Biochimica et biophysica acta.

[43]  J. Rossier,et al.  Ponericins, New Antibacterial and Insecticidal Peptides from the Venom of the Ant Pachycondyla goeldii * , 2001, The Journal of Biological Chemistry.

[44]  P. Friden,et al.  Safety and clinical effects of topical histatin gels in humans with experimental gingivitis. , 2002, Journal of clinical periodontology.

[45]  P. Bulet,et al.  Antimicrobial peptides in insects; structure and function. , 1999, Developmental and comparative immunology.

[46]  Y. Shai,et al.  Mode of action of linear amphipathic α-helical antimicrobial peptides , 1998 .

[47]  Defensins. Natural peptide antibiotics of human neutrophils. , 1985 .

[48]  M. Salzet,et al.  Antimicrobial peptides versus parasitic infections? , 2002, Trends in parasitology.

[49]  E. Méndez,et al.  γ‐Purothionins: amino acid sequence of two polypeptides of a new family of thionins from wheat endosperm , 1990, FEBS letters.

[50]  L. Otvos,et al.  Intracellular targets of antibacterial peptides. , 2002, Current drug targets.

[51]  W. Stamm,et al.  In Vitro Microbicidal Activities of Cecropin Peptides D2A21 and D4E1 and Gel Formulations Containing 0.1 to 2% D2A21 against Chlamydia trachomatis , 2002, Antimicrobial Agents and Chemotherapy.

[52]  D. Kemp,et al.  Mechanism of Stabilization of Helical Conformations of Polypeptides by Water Containing Trifluoroethanol , 1996 .

[53]  M. Selsted,et al.  Liposomal entrapment of the neutrophil-derived peptide indolicidin endows it with in vivo antifungal activity. , 1995, Biochimica et biophysica acta.

[54]  I. Mattsby‐Baltzer,et al.  Human Lactoferrin and Peptides Derived from a Surface-Exposed Helical Region Reduce Experimental Escherichia coli Urinary Tract Infection in Mice , 2000, Infection and Immunity.

[55]  V. Reddy,et al.  Evaluation of the antifertility effect of magainin-A in rabbits: in vitro and in vivo studies. , 2000, Fertility and sterility.

[56]  M. Benincasa,et al.  SMAP‐29: a potent antibacterial and antifungal peptide from sheep leukocytes , 1999, FEBS letters.

[57]  T. Cleveland,et al.  Fungicidal activity of cecropin A , 1997, Antimicrobial agents and chemotherapy.

[58]  T. Saito,et al.  A novel big defensin identified in horseshoe crab hemocytes: isolation, amino acid sequence, and antibacterial activity. , 1995, Journal of biochemistry.

[59]  Tao Xu,et al.  Anticandidal activity of major human salivary histatins , 1991, Infection and immunity.

[60]  A. Harris,et al.  Localization of expression of human beta defensin‐1 in the pancreas and kidney , 1998 .

[61]  R. Sato,et al.  Acaloleptins A: inducible antibacterial peptides from larvae of the beetle, Acalolepta luxuriosa. , 1999, Archives of insect biochemistry and physiology.

[62]  H. Jörnvall,et al.  The human antimicrobial and chemotactic peptides LL-37 and alpha-defensins are expressed by specific lymphocyte and monocyte populations. , 2000, Blood.

[63]  R. Nagaraj,et al.  Interaction of antimicrobial peptides with biological and model membranes: structural and charge requirements for activity. , 1999, Biochimica et biophysica acta.

[64]  K. Agarwala,et al.  Tachycitin, a small granular component in horseshoe crab hemocytes, is an antimicrobial protein with chitin-binding activity. , 1996, Journal of biochemistry.

[65]  P. Kraulis,et al.  The solution conformation of the antibacterial peptide cecropin A: a nuclear magnetic resonance and dynamical simulated annealing study. , 1988, Biochemistry.

[66]  R. Epand,et al.  Relationship of membrane curvature to the formation of pores by magainin 2. , 1998, Biochemistry.

[67]  W. Shafer,et al.  Susceptibility of Neisseria gonorrhoeae to protegrins , 1996, Infection and immunity.

[68]  D. Hoover,et al.  The structure of human beta-defensin-1: new insights into structural properties of beta-defensins. , 2001, The Journal of biological chemistry.

[69]  W. D. de Vos,et al.  Properties of nisin Z and distribution of its gene, nisZ, in Lactococcus lactis , 1993, Applied and Environmental Microbiology.

[70]  D. Manjramkar,et al.  Preclinical evaluation of magainin-A as a contraceptive antimicrobial agent. , 2004, Fertility and sterility.

[71]  J. Hansen,et al.  Some chemical and physical properties of nisin, a small-protein antibiotic produced by Lactococcus lactis , 1990, Applied and environmental microbiology.

[72]  C. Bertozzi,et al.  A chemically synthesized version of the insect antibacterial glycopeptide, diptericin, disrupts bacterial membrane integrity. , 1999, Biochemistry.

[73]  Jürg Müller,et al.  Cupiennin 1, a New Family of Highly Basic Antimicrobial Peptides in the Venom of the Spider Cupiennius salei(Ctenidae)* , 2002, The Journal of Biological Chemistry.

[74]  T. Yoneya,et al.  Antimicrobial peptide, tachyplesin I, isolated from hemocytes of the horseshoe crab (Tachypleus tridentatus). NMR determination of the beta-sheet structure. , 1990, The Journal of biological chemistry.

[75]  L. Bagella,et al.  Biological Characterization of Two Novel Cathelicidin-derived Peptides and Identification of Structural Requirements for Their Antimicrobial and Cell Lytic Activities* , 1996, The Journal of Biological Chemistry.

[76]  T. Ganz,et al.  Contribution of rabbit leukocyte defensins to the host response in experimental syphilis , 1991, Infection and immunity.

[77]  P. McCray,et al.  Susceptibilities of Oral Bacteria and Yeast to Mammalian Cathelicidins , 2001, Antimicrobial Agents and Chemotherapy.

[78]  T. Miyata,et al.  Tachyplesin, a class of antimicrobial peptide from the hemocytes of the horseshoe crab (Tachypleus tridentatus). Isolation and chemical structure. , 1988, The Journal of biological chemistry.

[79]  P. Bulet,et al.  Penaeidins, a family of antimicrobial peptides from penaeid shrimp (Crustacea, Decapoda) , 2000, Cellular and Molecular Life Sciences CMLS.

[80]  David S. Wishart,et al.  Unusual β-sheet periodicity in small cyclic peptides , 1998, Nature Structural Biology.

[81]  T. Yoneya,et al.  Antimicrobial peptides, isolated from horseshoe crab hemocytes, tachyplesin II, and polyphemusins I and II: chemical structures and biological activity. , 1989, Journal of biochemistry.

[82]  P. Fehlbaum,et al.  Characterization of Novel Cysteine-rich Antimicrobial Peptides from Scorpion Blood* , 1996, The Journal of Biological Chemistry.

[83]  B. de Kruijff,et al.  The lantibiotic nisin, a special case or not? , 1999, Biochimica et biophysica acta.

[84]  T. Mashimo,et al.  Antimicrobial activity of a 13 amino acid tryptophan‐rich peptide derived from a putative porcine precursor protein of a novel family of antibacterial peptides , 1996, FEBS letters.

[85]  E. Krause,et al.  Peptide hydrophobicity controls the activity and selectivity of magainin 2 amide in interaction with membranes. , 1997, Biochemistry.

[86]  C. Aranha,et al.  Contraceptive efficacy of antimicrobial peptide Nisin: in vitro and in vivo studies. , 2004, Contraception.

[87]  R. Locksley,et al.  The Instructive Role of Innate Immunity in the Acquired Immune Response , 1996, Science.

[88]  C. de Haro,et al.  Primary structure and inhibition of protein synthesis in eukaryotic cell-free system of a novel thionin, gamma-hordothionin, from barley endosperm. , 1990, European journal of biochemistry.

[89]  A. van Dorsselaer,et al.  Recombinant expression and range of activity of penaeidins, antimicrobial peptides from penaeid shrimp. , 1999, European journal of biochemistry.

[90]  K. Matsuyama,et al.  Purification of three antibacterial proteins from the culture medium of NIH-Sape-4, an embryonic cell line of Sarcophaga peregrina. , 1988, The Journal of biological chemistry.

[91]  Chikashi Nakamura,et al.  Design and Activity of Antimicrobial Peptides against Sporogonic-Stage Parasites Causing Murine Malarias , 2002, Antimicrobial Agents and Chemotherapy.

[92]  L. Bobek,et al.  Human salivary histatins: promising anti-fungal therapeutic agents. , 1998, Critical reviews in oral biology and medicine : an official publication of the American Association of Oral Biologists.

[93]  E. Wagar,et al.  Susceptibility of Chlamydia trachomatis to protegrins and defensins , 1996, Infection and immunity.

[94]  T. Ganz,et al.  The Role of Protegrins and Other Elastase-Activated Polypeptides in the Bactericidal Properties of Porcine Inflammatory Fluids , 1998, Infection and Immunity.

[95]  W. Sawicki,et al.  Embryotoxicity of magainin-2-amide and its enhancement by cyclodextrin, albumin, hydrogen peroxide and acidification. , 2001, Human reproduction.

[96]  A. Pardi,et al.  NMR studies of defensin antimicrobial peptides. 2. Three-dimensional structures of rabbit NP-2 and human HNP-1. , 1992, Biochemistry.

[97]  A. Rao,et al.  In vitro activity of the antimicrobial peptides human and rabbit defensins and porcine leukocyte protegrin against Mycobacterium tuberculosis , 1996, Infection and immunity.

[98]  R. Lehrer,et al.  NP-1, a rabbit alpha-defensin, prevents the entry and intercellular spread of herpes simplex virus type 2. , 2003, Antimicrobial agents and chemotherapy.

[99]  Alessandro Tossi,et al.  Amphipathic, α‐helical antimicrobial peptides , 2000 .

[100]  P. Lepage,et al.  Insect immunity: isolation from immune blood of the dipteran Phormia terranovae of two insect antibacterial peptides with sequence homology to rabbit lung macrophage bactericidal peptides. , 1989, Proceedings of the National Academy of Sciences of the United States of America.

[101]  J. Schröder,et al.  Human beta-defensin-2. , 1999, The international journal of biochemistry & cell biology.

[102]  H. Ginsburg,et al.  In Vitro Antiplasmodium Effects of Dermaseptin S4 Derivatives , 2002, Antimicrobial Agents and Chemotherapy.

[103]  G. Scalise,et al.  In Vitro Activities of Membrane-Active Peptides against Gram-Positive and Gram-Negative Aerobic Bacteria , 1998, Antimicrobial Agents and Chemotherapy.

[104]  H. Philippe,et al.  Innate Immunity , 1996, The Journal of Biological Chemistry.

[105]  M. Ptak,et al.  Solution structure of drosomycin, the first inducible antifungal protein from insects , 1997, Protein science : a publication of the Protein Society.

[106]  C. W. Hilbers,et al.  Three-dimensional structure of the lantibiotic nisin in the presence of membrane-mimetic micelles of dodecylphosphocholine and of sodium dodecylsulphate. , 1996, European journal of biochemistry.

[107]  Wayne L. Smith,et al.  Indolicidin, a novel bactericidal tridecapeptide amide from neutrophils. , 1992, The Journal of biological chemistry.

[108]  R. Hancock Host defence (cationic) peptides: what is their future clinical potential? , 1999, Drugs.

[109]  C. Aranha,et al.  Original research article Contraceptive efficacy of antimicrobial peptide Nisin: in vitro and in vivo studies , 2004 .

[110]  Robert Bals,et al.  Epithelial antimicrobial peptides in host defense against infection , 2000, Respiratory research.

[111]  T. Walsh,et al.  Antifungal Peptides: Novel Therapeutic Compounds against Emerging Pathogens , 1999, Antimicrobial Agents and Chemotherapy.

[112]  W. Sawicki,et al.  Contraceptive potential of peptide antibiotics , 1999, The Lancet.