Research on Robust Relationship Inference in GWAS Parallel Algorithm Based on OpenMP

In order to improve the efficiency of soybean genetic variation information, robust relationship inference in GWAS parallel algorithm is raised in this paper. This algorithm is adopted serial and parallel hybrid structure. Each row of data is parallel processed by OpenMP technique. The I/O processing and the accumulate processing are treated as a serial. Finally, the serial and parallel algorithms are compared and analyzed. The results reached theoretically exceptional speedup. The experimental results show that the execution efficiency of parallel algorithm has very big promotion than the serial algorithm. The soybean genetic variation information processing can be speed up effectively.