Detection of prostate cancer using temporal sequences of ultrasound data: a large clinical feasibility study

PurposeThis paper presents the results of a large study involving fusion prostate biopsies to demonstrate that temporal ultrasound can be used to accurately classify tissue labels identified in multi-parametric magnetic resonance imaging (mp-MRI) as suspicious for cancer.MethodsWe use deep learning to analyze temporal ultrasound data obtained from 255 cancer foci identified in mp-MRI. Each target is sampled in axial and sagittal planes. A deep belief network is trained to automatically learn the high-level latent features of temporal ultrasound data. A support vector machine classifier is then applied to differentiate cancerous versus benign tissue, verified by histopathology. Data from 32 targets are used for the training, while the remaining 223 targets are used for testing.ResultsOur results indicate that the distance between the biopsy target and the prostate boundary, and the agreement between axial and sagittal histopathology of each target impact the classification accuracy. In 84 test cores that are 5 mm or farther to the prostate boundary, and have consistent pathology outcomes in axial and sagittal biopsy planes, we achieve an area under the curve of 0.80. In contrast, all of these targets were labeled as moderately suspicious in mp-MR.ConclusionUsing temporal ultrasound data in a fusion prostate biopsy study, we achieved a high classification accuracy specifically for moderately scored mp-MRI targets. These targets are clinically common and contribute to the high false-positive rates associated with mp-MRI for prostate cancer detection. Temporal ultrasound data combined with mp-MRI have the potential to reduce the number of unnecessary biopsies in fusion biopsy settings.

[1]  Jurgen J Fütterer,et al.  Accuracy of multiparametric MRI for prostate cancer detection: a meta-analysis. , 2014, AJR. American journal of roentgenology.

[2]  Christophe Iselin,et al.  Importance and determinants of Gleason score undergrading on biopsy sample of prostate cancer in a population-based study , 2013, BMC Urology.

[3]  Jing Du,et al.  Influence of Serum Prostate‐Specific Antigen (PSA) Level, Prostate Volume, and PSA Density on Prostate Cancer Detection With Contrast‐Enhanced Sonography Using Contrast‐Tuned Imaging Technology , 2013, Journal of ultrasound in medicine : official journal of the American Institute of Ultrasound in Medicine.

[4]  H. Laborit,et al.  [Experimental study]. , 1958, Bulletin mensuel - Societe de medecine militaire francaise.

[5]  P. Choyke,et al.  Real-time MRI-TRUS fusion for guidance of targeted prostate biopsies , 2008, Computer aided surgery : official journal of the International Society for Computer Aided Surgery.

[6]  Yee Whye Teh,et al.  A Fast Learning Algorithm for Deep Belief Nets , 2006, Neural Computation.

[7]  Mehdi Moradi,et al.  Ultrasound RF time series for tissue typing: first in vivo clinical results , 2013, Medical Imaging.

[8]  Baris Turkbey,et al.  Prostate cancer: can multiparametric MR imaging help identify patients who are candidates for active surveillance? , 2013, Radiology.

[9]  Geoffrey E. Hinton A Practical Guide to Training Restricted Boltzmann Machines , 2012, Neural Networks: Tricks of the Trade.

[10]  Purang Abolmaesumi,et al.  Ultrasound-Based Characterization of Prostate Cancer Using Joint Independent Component Analysis , 2015, IEEE Transactions on Biomedical Engineering.

[11]  Purang Abolmaesumi,et al.  Tissue typing using ultrasound RF time series: experiments with animal tissue samples. , 2010, Medical physics.

[12]  Purang Abolmaesumi,et al.  Ultrasound-Based Characterization of Prostate Cancer: An in vivo Clinical Feasibility Study , 2013, MICCAI.

[13]  Purang Abolmaesumi,et al.  Augmenting MRI–transrectal ultrasound-guided prostate biopsy with temporal ultrasound data: a clinical feasibility study , 2015, International Journal of Computer Assisted Radiology and Surgery.

[14]  H. Ermert,et al.  Tissue-characterization of the prostate using radio frequency ultrasonic signals , 1999, IEEE Transactions on Ultrasonics, Ferroelectrics and Frequency Control.

[15]  Heinz-Peter Schlemmer,et al.  Critical evaluation of magnetic resonance imaging targeted, transrectal ultrasound guided transperineal fusion biopsy for detection of prostate cancer. , 2013, The Journal of urology.

[16]  Purang Abolmaesumi,et al.  Ultrasound-Based Detection of Prostate Cancer Using Automatic Feature Selection with Deep Belief Networks , 2015, MICCAI.

[17]  Hod Lipson,et al.  Visually Debugging Restricted Boltzmann Machine Training with a 3D Example , 2012 .

[18]  Hessel Wijkstra,et al.  Transrectal ultrasound imaging and prostate cancer. , 2003, Archivio italiano di urologia, andrologia : organo ufficiale [di] Societa italiana di ecografia urologica e nefrologica.

[19]  E. Konofagou,et al.  A clinical feasibility study of atrial and ventricular electromechanical wave imaging. , 2013, Heart rhythm.

[20]  Masatoshi Okutomi,et al.  A Novel Inference of a Restricted Boltzmann Machine , 2014, 2014 22nd International Conference on Pattern Recognition.

[21]  Purang Abolmaesumi,et al.  Tissue Classification Using Ultrasound-Induced Variations in Acoustic Backscattering Features , 2013, IEEE Transactions on Biomedical Engineering.

[22]  Bruce J Trock,et al.  Upgrading and downgrading of prostate cancer from biopsy to radical prostatectomy: incidence and predictive factors using the modified Gleason grading system and factoring in tertiary grades. , 2012, European urology.

[23]  O. Hélénon,et al.  Ultrasound elastography of the prostate: state of the art. , 2013, Diagnostic and interventional imaging.

[24]  T. Miyagawa,et al.  Real-time elastography for the diagnosis of prostate cancer: evaluation of elastographic moving images. , 2009, Japanese journal of clinical oncology.

[25]  Peter Glöckner,et al.  Why Does Unsupervised Pre-training Help Deep Learning? , 2013 .

[26]  Thomas Hofmann,et al.  Greedy Layer-Wise Training of Deep Networks , 2007 .

[27]  Feng Hua Li,et al.  Influence of serum prostate-specific antigen (PSA) level, prostate volume, and PSA density on prostate cancer detection with contrast-enhanced sonography using contrast-tuned imaging technology. , 2013, Journal of ultrasound in medicine : official journal of the American Institute of Ultrasound in Medicine.

[28]  Shyam Natarajan,et al.  MRI–ultrasound fusion for guidance of targeted prostate biopsy , 2013, Current opinion in urology.

[29]  Purang Abolmaesumi,et al.  Computer-Aided Prostate Cancer Detection Using Ultrasound RF Time Series: In Vivo Feasibility Study , 2015, IEEE Transactions on Medical Imaging.

[30]  Jeffrey A. Ketterling,et al.  Recent Advances in Ultrasonic Tissue-Type Imaging of the Prostate , 2007 .

[31]  Mehdi Moradi,et al.  Multiparametric 3D in vivo ultrasound vibroelastography imaging of prostate cancer: Preliminary results. , 2014, Medical physics.

[32]  Purang Abolmaesumi,et al.  Augmenting Detection of Prostate Cancer in Transrectal Ultrasound Images Using SVM and RF Time Series , 2009, IEEE Transactions on Biomedical Engineering.

[33]  Suhyun Park,et al.  Elasticity Imaging Using Conventional and High-Frame Rate Ultrasound Imaging: Experimental Study , 2007, IEEE Transactions on Ultrasonics, Ferroelectrics and Frequency Control.

[34]  Tom Fawcett,et al.  An introduction to ROC analysis , 2006, Pattern Recognit. Lett..

[35]  E. Halpern,et al.  Targeted biopsy of the prostate: the impact of color Doppler imaging and elastography on prostate cancer detection and Gleason score. , 2007, Urology.