Prediction of protein coding regions by the 3-base periodicity analysis of a DNA sequence.
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[1] Changchuan Yin,et al. A Fourier Characteristic of Coding Sequences: Origins and a Non-Fourier Approximation , 2005, J. Comput. Biol..
[2] Alan K. Mackworth,et al. Evaluation of gene-finding programs on mammalian sequences. , 2001, Genome research.
[3] P. Rouzé,et al. Current methods of gene prediction, their strengths and weaknesses. , 2002, Nucleic acids research.
[4] Jiao Jin,et al. Identification of Protein Coding Regions of Rice Genes Using Alternative Spectral Rotation Measure and Linear Discriminant Analysis , 2004, Genomics, proteomics & bioinformatics.
[5] W. Godwin. Article in Press , 2000 .
[6] R. Voss,et al. Evolution of long-range fractal correlations and 1/f noise in DNA base sequences. , 1992, Physical review letters.
[7] M. Yan,et al. A new fourier transform approach for protein coding measure based on the format of the Z curve , 1998, Bioinform..
[8] E. Hill. Journal of Theoretical Biology , 1961, Nature.
[9] P. P. Vaidyanathan,et al. The role of signal-processing concepts in genomics and proteomics , 2004, J. Frankl. Inst..
[10] S. Karlin,et al. Prediction of complete gene structures in human genomic DNA. , 1997, Journal of molecular biology.
[11] Michael Ruogu Zhang,et al. Identification of protein coding regions in the human genome by quadratic discriminant analysis. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[12] R. Linsker,et al. A measure of DNA periodicity. , 1986, Journal of theoretical biology.
[13] James W. Fickett,et al. The Gene Identification Problem: An Overview for Developers , 1995, Comput. Chem..
[14] Wei Wang,et al. Computing linear transforms of symbolic signals , 2002, IEEE Trans. Signal Process..
[15] Yizhar Lavner,et al. Gene prediction by spectral rotation measure: a new method for identifying protein-coding regions. , 2003, Genome research.
[16] Michael Q. Zhang. Computational prediction of eukaryotic protein-coding genes , 2002, Nature Reviews Genetics.
[17] J. Fickett. Recognition of protein coding regions in DNA sequences. , 1982, Nucleic acids research.
[18] Dimitris Anastassiou,et al. Frequency-domain analysis of biomolecular sequences , 2000, Bioinform..
[19] Gerhard Kauer,et al. Applying signal theory to the analysis of biomolecules , 2003, Bioinform..
[20] R. Guigó,et al. Evaluation of gene structure prediction programs. , 1996, Genomics.
[21] Jianbo Gao,et al. Protein Coding Sequence Identification by Simultaneously Characterizing the Periodic and Random Features of DNA Sequences , 2005, Journal of biomedicine & biotechnology.
[22] P. Vandergheynst,et al. Fourier and wavelet transform analysis, a tool for visualizing regular patterns in DNA sequences. , 2000, Journal of theoretical biology.
[23] J. Fickett,et al. Assessment of protein coding measures. , 1992, Nucleic acids research.
[24] A A Tsonis,et al. Periodicity in DNA coding sequences: implications in gene evolution. , 1991, Journal of theoretical biology.
[25] V. Chechetkin,et al. Size-dependence of three-periodicity and long-range correlations in DNA sequences , 1995 .
[26] S. Tiwari,et al. Prediction of probable genes by Fourier analysis of genomic sequences , 1997, Comput. Appl. Biosci..
[27] Tin Wee Tan,et al. Xpro: database of eukaryotic protein-encoding genes , 2004, Nucleic Acids Res..