Real-World Implications of a Rapidly Responsive COVID-19 Spread Model with Time-Dependent Parameters via Deep Learning: Model Development and Validation

Background The COVID-19 pandemic has caused major disruptions worldwide since March 2020. The experience of the 1918 influenza pandemic demonstrated that decreases in the infection rates of COVID-19 do not guarantee continuity of the trend. Objective The aim of this study was to develop a precise spread model of COVID-19 with time-dependent parameters via deep learning to respond promptly to the dynamic situation of the outbreak and proactively minimize damage. Methods In this study, we investigated a mathematical model with time-dependent parameters via deep learning based on forward-inverse problems. We used data from the Korea Centers for Disease Control and Prevention (KCDC) and the Center for Systems Science and Engineering (CSSE) at Johns Hopkins University for Korea and the other countries, respectively. Because the data consist of confirmed, recovered, and deceased cases, we selected the susceptible-infected-recovered (SIR) model and found approximated solutions as well as model parameters. Specifically, we applied fully connected neural networks to the solutions and parameters and designed suitable loss functions. Results We developed an entirely new SIR model with time-dependent parameters via deep learning methods. Furthermore, we validated the model with the conventional Runge-Kutta fourth order model to confirm its convergent nature. In addition, we evaluated our model based on the real-world situation reported from the KCDC, the Korean government, and news media. We also crossvalidated our model using data from the CSSE for Italy, Sweden, and the United States. Conclusions The methodology and new model of this study could be employed for short-term prediction of COVID-19, which could help the government prepare for a new outbreak. In addition, from the perspective of measuring medical resources, our model has powerful strength because it assumes all the parameters as time-dependent, which reflects the exact status of viral spread.

[1]  Timothy F. Leslie,et al.  Complexity of the Basic Reproduction Number (R0) , 2019, Emerging infectious diseases.

[2]  J. Rocklöv,et al.  The reproductive number of COVID-19 is higher compared to SARS coronavirus , 2020, Journal of travel medicine.

[3]  Paris Perdikaris,et al.  Physics-informed neural networks: A deep learning framework for solving forward and inverse problems involving nonlinear partial differential equations , 2019, J. Comput. Phys..

[4]  Yuan Zhang,et al.  Estimation of the time-varying reproduction number of COVID-19 outbreak in China , 2020, International Journal of Hygiene and Environmental Health.

[5]  Hyeontae Jo,et al.  Deep Neural Network Approach to Forward-Inverse Problems , 2019, Networks Heterog. Media.

[6]  Cheng-Shang Chang,et al.  A Time-Dependent SIR Model for COVID-19 With Undetectable Infected Persons , 2020, IEEE Transactions on Network Science and Engineering.

[7]  Xinxin Zhang,et al.  Phase-adjusted estimation of the number of Coronavirus Disease 2019 cases in Wuhan, China , 2020, Cell Discovery.

[8]  C. Whittaker,et al.  Report 9: Impact of non-pharmaceutical interventions (NPIs) to reduce COVID19 mortality and healthcare demand , 2020 .

[9]  Yongli Cai,et al.  A conceptual model for the coronavirus disease 2019 (COVID-19) outbreak in Wuhan, China with individual reaction and governmental action , 2020, International Journal of Infectious Diseases.

[10]  M. Lipsitch,et al.  How generation intervals shape the relationship between growth rates and reproductive numbers , 2007, Proceedings of the Royal Society B: Biological Sciences.

[11]  Zhen Jin,et al.  Phase-adjusted estimation of the COVID-19 outbreak in South Korea under multi-source data and adjustment measures: a modelling study. , 2020, Mathematical biosciences and engineering : MBE.

[12]  G. Chowell,et al.  Transmission potential and severity of COVID-19 in South Korea , 2020, International Journal of Infectious Diseases.

[13]  Colin Roberts,et al.  Flattening the curve on Covid-19 , 2020, Veterinary Record.

[14]  G. Barbastathis,et al.  Quantifying the effect of quarantine control in Covid-19 infectious spread using machine learning , 2020, medRxiv.