Systems Biology: Simulation of Dynamic Network States

Preface 1. Introduction 2. Basic concepts Part I. Simulation of Dynamic States: 3. Dynamic simulation: the basic procedure 4. Chemical reactions 5. Enzyme kinetics 6. Open systems Part II. Biological Characteristics: 7. Orders of magnitude 8. Stoichiometric structure 9. Regulation as elementary phenomena Part III. Metabolism: 10. Glycolysis 11. Coupling pathways 12. Building networks Part IV. Macromolecules: 13. Hemoglobin 14. Regulated enzymes 15. Epilogue A. Nomenclature B. Homework problems References Index.