Improved covariance model parameter estimation using RNA thermodynamic properties
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[1] M. Zuker. Computer prediction of RNA structure. , 1989, Methods in Enzymology.
[2] Sean R. Eddy,et al. Query-Dependent Banding (QDB) for Faster RNA Similarity Searches , 2007, PLoS Comput. Biol..
[3] Zasha Weinberg,et al. Faster genome annotation of non-coding RNA families without loss of accuracy , 2004, RECOMB.
[4] David Haussler,et al. Dirichlet mixtures: a method for improved detection of weak but significant protein sequence homology , 1996, Comput. Appl. Biosci..
[5] Andrew Hendriks,et al. Analysis of Thermodynamic Models and Performance in RnaPredict - An Evolutionary Algorithm for RNA Folding , 2006, 2006 IEEE Symposium on Computational Intelligence and Bioinformatics and Computational Biology.
[6] Luc Jaeger,et al. RNA pseudoknots , 1992, Current Biology.
[7] S. Eddy. Hidden Markov models. , 1996, Current opinion in structural biology.
[8] Sean R. Eddy,et al. Rfam: annotating non-coding RNAs in complete genomes , 2004, Nucleic Acids Res..
[9] Sean R. Eddy,et al. Biological Sequence Analysis: Probabilistic Models of Proteins and Nucleic Acids , 1998 .
[10] Scott F. Smith. Covariance Searches for ncRNA Gene Finding , 2006, 2006 IEEE Symposium on Computational Intelligence and Bioinformatics and Computational Biology.
[11] R. Durbin,et al. RNA sequence analysis using covariance models. , 1994, Nucleic acids research.
[12] D. Turner,et al. Improved free-energy parameters for predictions of RNA duplex stability. , 1986, Proceedings of the National Academy of Sciences of the United States of America.