Analysis of mechanotransduction dynamics during combined mechanical stimulation and modulation of the extracellular-regulated kinase cascade uncovers hidden information within the signalling noise

Osteoporosis is a bone disease characterized by brittle bone and increased fracture incidence. With ageing societies worldwide, the disease presents a high burden on health systems. Furthermore, there are limited treatments for osteoporosis with just two anabolic pharmacological agents approved by the US Food and Drug Administration. Healthy bones are believed to be maintained via an intricate relationship between dual biochemical and mechanical (bio-mechanical) stimulations. It is widely considered that osteoporosis emerges as a result of disturbances to said relationship. The mechanotransduction process is key to this balance, and disruption of its dynamics in bone cells plays a role in osteoporosis development. Nonetheless, the exact details and mechanisms that drive and secure the health of bones are still elusive at the cellular and molecular scales. This study examined the dual modulation of mechanical stimulation and mechanotransduction activation dynamics in an osteoblast (OB). The aim was to find patterns of mechanotransduction dynamics demonstrating a significant change that can be mapped to alterations in the OB responses, specifically at the level of gene expression and osteogenic markers such as alkaline phosphatase. This was achieved using a three-dimensional hybrid multiscale computational model simulating mechanotransduction in the OB and its interaction with the extracellular matrix, combined with a numerical analytical technique. The model and the analysis method predict that within the noise of mechanotransduction, owing to modulation of the bio-mechanical stimulus and consequent gene expression, there are unique events that provide signatures for a shift in the system's dynamics. Furthermore, the study uncovered molecular interactions that can be potential drug targets.

[1]  Efthimia K Basdra,et al.  Mechanotransduction in osteoblast regulation and bone disease. , 2009, Trends in molecular medicine.

[2]  X. Guo,et al.  Trabecular Bone Response to Mechanical and Parathyroid Hormone Stimulation: The Role of Mechanical Microenvironment , 2003, Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research.

[3]  Toru Hirano,et al.  Anabolic Effects of Human Biosynthetic Parathyroid Hormone Fragment (1–34), LY333334, on Remodeling and Mechanical Properties of Cortical Bone in Rabbits , 1999, Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research.

[4]  H. Shankaran,et al.  ERK Oscillation-Dependent Gene Expression Patterns and Deregulation by Stress Response , 2014, Chemical research in toxicology.

[5]  Shelly R. Peyton,et al.  ECM Compliance Regulates Osteogenesis by Influencing MAPK Signaling Downstream of RhoA and ROCK , 2009, Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research.

[6]  L. Vassilev,et al.  In Vivo Activation of the p53 Pathway by Small-Molecule Antagonists of MDM2 , 2004, Science.

[7]  T. Vincent Targeting mechanotransduction pathways in osteoarthritis: a focus on the pericellular matrix. , 2013, Current opinion in pharmacology.

[8]  Jinfu Wang,et al.  The interaction between β1 integrins and ERK1/2 in osteogenic differentiation of human mesenchymal stem cells under fluid shear stress modelled by a perfusion system , 2014, Journal of tissue engineering and regenerative medicine.

[9]  Mike Holcombe,et al.  Introducing Spatial Information into Predictive NF-κB Modelling – An Agent-Based Approach , 2008, PloS one.

[10]  R. Bacabac,et al.  Microgravity and bone cell mechanosensitivity. , 2003, Advances in space research : the official journal of the Committee on Space Research.

[11]  G. Giaccone,et al.  Phase II Study of Single-Agent Navitoclax (ABT-263) and Biomarker Correlates in Patients with Relapsed Small Cell Lung Cancer , 2012, Clinical Cancer Research.

[12]  Mike Holcombe,et al.  Formal agent-based modelling of intracellular chemical interactions. , 2006, Bio Systems.

[13]  Francesco Mainardi,et al.  Subordination pathways to fractional diffusion , 2011, 1104.4041.

[14]  P. Friedl,et al.  Tuning Collective Cell Migration by Cell-Cell Junction Regulation. , 2017, Cold Spring Harbor perspectives in biology.

[15]  I M Sokolov,et al.  From diffusion to anomalous diffusion: a century after Einstein's Brownian motion. , 2005, Chaos.

[16]  Daniela M. Romano,et al.  High performance cellular level agent-based simulation with FLAME for the GPU , 2010, Briefings Bioinform..

[17]  Tianhai Tian,et al.  How MAP kinase modules function as robust, yet adaptable, circuits , 2014, Cell cycle.

[18]  Andrés J. García,et al.  The effect of conditional inactivation of beta 1 integrins using twist 2 Cre, Osterix Cre and osteocalcin Cre lines on skeletal phenotype. , 2014, Bone.

[19]  Kazuhiro Aoki,et al.  Stochastic ERK activation induced by noise and cell-to-cell propagation regulates cell density-dependent proliferation. , 2013, Molecular cell.

[20]  M. Schaffler,et al.  Osteocyte differentiation is regulated by extracellular matrix stiffness and intercellular separation. , 2013, Journal of the mechanical behavior of biomedical materials.

[21]  David K. Karig,et al.  Noise in biological circuits. , 2009, Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology.

[22]  Damien Lacroix,et al.  Revealing hidden information in osteoblast’s mechanotransduction through analysis of time patterns of critical events , 2020, BMC Bioinformatics.

[23]  Gregory F Weber,et al.  Mechanical stress-activated integrin α5β1 induces opening of connexin 43 hemichannels , 2012, Proceedings of the National Academy of Sciences.

[24]  Taichiro Tomida,et al.  Oscillation of p38 activity controls efficient pro-inflammatory gene expression , 2015, Nature Communications.

[25]  J. Wells,et al.  Small-molecule inhibitors of protein-protein interactions: progressing toward the reality. , 2014, Chemistry & biology.

[26]  Mike Holcombe,et al.  Modelling the Transport of Nanoparticles under Blood Flow using an Agent-based Approach , 2015, Scientific Reports.

[27]  K. Ness,et al.  Effect of Low-Magnitude, High-Frequency Mechanical Stimulation on BMD Among Young Childhood Cancer Survivors: A Randomized Clinical Trial. , 2016, JAMA oncology.

[28]  P. Iglesias,et al.  Integrating chemical and mechanical signals through dynamic coupling between cellular protrusions and pulsed ERK activation , 2018, Nature Communications.

[29]  V. Viasnoff,et al.  Mechanosensing and Mechanotransduction at Cell-Cell Junctions. , 2018, Cold Spring Harbor perspectives in biology.

[30]  John G. Albeck,et al.  Frequency-modulated pulses of ERK activity transmit quantitative proliferation signals. , 2013, Molecular cell.

[31]  D. Lacroix,et al.  Heterogeneity in The Mechanical Properties of Integrins Determines Mechanotransduction Dynamics in Bone Osteoblasts , 2019, Scientific Reports.

[32]  M. Capulli,et al.  Osteoblast and osteocyte: games without frontiers. , 2014, Archives of biochemistry and biophysics.

[33]  Minqi Li,et al.  Targeted ablation of osteocytes induces osteoporosis with defective mechanotransduction. , 2007, Cell metabolism.

[34]  Y. Ohira,et al.  Mechanical stretch activates signaling events for protein translation initiation and elongation in C2C12 myoblasts , 2010, Molecules and cells.

[35]  Jay D. Humphrey,et al.  Mechanotransduction and extracellular matrix homeostasis , 2014, Nature Reviews Molecular Cell Biology.

[36]  E. Nishida,et al.  Dynamics of the Ras/ERK MAPK Cascade as Monitored by Fluorescent Probes* , 2006, Journal of Biological Chemistry.

[37]  A. Johansen,et al.  PAM3: THE COST OF OSTEOPOROTIC FRACTURES IN THE UNITED KINGDOM , 2001 .

[38]  R. Fässler,et al.  Integrin-mediated mechanotransduction , 2016, The Journal of cell biology.

[39]  R. Lefkowitz,et al.  A β-Arrestin–Biased Agonist of the Parathyroid Hormone Receptor (PTH1R) Promotes Bone Formation Independent of G Protein Activation , 2009, Science Translational Medicine.

[40]  D. Fletcher,et al.  Mechanotransduction by the Actin Cytoskeleton: Converting Mechanical Stimuli into Biochemical Signals , 2018 .

[41]  C. Stanford,et al.  Osteoblast Integrin Adhesion and Signaling Regulate Mineralization , 2001, Journal of dental research.

[42]  M. Holcombe,et al.  Multi-Compartmentalisation in the MAPK Signalling Pathway Contributes to the Emergence of Oscillatory Behaviour and to Ultrasensitivity , 2016, PloS one.

[43]  Nils Blüthgen,et al.  Competing docking interactions can bring about bistability in the MAPK cascade. , 2007, Biophysical journal.

[44]  A. R. Perestrelo,et al.  Cellular Mechanotransduction: From Tension to Function , 2018, Front. Physiol..

[45]  L. Luttrell,et al.  ‘Biasing’ the parathyroid hormone receptor: A novel anabolic approach to increasing bone mass? , 2011, British journal of pharmacology.

[46]  Mike Holcombe,et al.  Reducing complexity in an agent based reaction model—Benefits and limitations of simplifications in relation to run time and system level output , 2016, Biosyst..

[47]  W. Goldmann,et al.  Cellular mechanotransduction , 2016 .

[48]  Eduardo Sontag,et al.  Load-Induced Modulation of Signal Transduction Networks , 2011, Science Signaling.

[49]  M.P. Yavropoulou,et al.  The molecular basis of bone mechanotransduction , 2016, Journal of musculoskeletal & neuronal interactions.