Model annotation for synthetic biology: automating model to nucleotide sequence conversion
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Goksel Misirli | Anil Wipat | James R. Lawson | Tommy Yu | Jennifer Hallinan | Mike T. Cooling | Sarala M. Wimalaratne | S. Wimalaratne | J. Hallinan | A. Wipat | M. Cooling | James R. Lawson | Goksel Misirli | Tommy Yu
[1] M T Cooling,et al. Modelling biological modularity with CellML. , 2008, IET systems biology.
[2] R Grosschedl,et al. Spacer DNA sequences upstream of the T-A-T-A-A-A-T-A sequence are essential for promotion of H2A histone gene transcription in vivo. , 1980, Proceedings of the National Academy of Sciences of the United States of America.
[3] Ricard V Solé,et al. Distributed robustness in cellular networks: insights from synthetic evolved circuits , 2009, Journal of The Royal Society Interface.
[4] Timothy S. Ham,et al. Production of the antimalarial drug precursor artemisinic acid in engineered yeast , 2006, Nature.
[5] Christopher A. Voigt,et al. Environmentally controlled invasion of cancer cells by engineered bacteria. , 2006, Journal of molecular biology.
[6] Ron Weiss,et al. Genetic circuit building blocks for cellular computation, communications, and signal processing , 2003, Natural Computing.
[7] Alfonso Jaramillo,et al. Genetdes: automatic design of transcriptional networks , 2007, Bioinform..
[8] Morgan Taschuk,et al. Saint: a lightweight integration environment for model annotation , 2009, Bioinform..
[9] Herbert M. Sauro,et al. Athena: Modular CAM/CAD Software for Synthetic Biology , 2009, WWW 2009.
[10] A. Goldbeter. Computational approaches to cellular rhythms , 2002, Nature.
[11] Timothy S. Ham,et al. Metabolic engineering of microorganisms for biofuels production: from bugs to synthetic biology to fuels. , 2008, Current opinion in biotechnology.
[12] Goksel Misirli,et al. Standard virtual biological parts: a repository of modular modeling components for synthetic biology , 2010, Bioinform..
[13] Jörg Stelling,et al. Computational design of synthetic gene circuits with composable parts , 2008, Bioinform..
[14] Chen Li,et al. Designing and encoding models for synthetic biology , 2009, Journal of The Royal Society Interface.
[15] Hugh D. Spence,et al. Minimum information requested in the annotation of biochemical models (MIRIAM) , 2005, Nature Biotechnology.
[16] Peter J. Hunter,et al. The CellML Model Repository , 2008, Bioinform..
[17] Hiroaki Kitano,et al. The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models , 2003, Bioinform..
[18] Peter J. Hunter,et al. An Overview of CellML 1.1, a Biological Model Description Language , 2003, Simul..
[19] E. Davidson,et al. Modeling transcriptional regulatory networks. , 2002, BioEssays : news and reviews in molecular, cellular and developmental biology.
[20] E. Andrianantoandro,et al. Synthetic biology: new engineering rules for an emerging discipline , 2006, Molecular systems biology.
[21] J. Hasty,et al. Synthetic gene network for entraining and amplifying cellular oscillations. , 2002, Physical review letters.
[22] Thomas F. Knight,et al. Idempotent Vector Design for Standard Assembly of Biobricks , 2003 .
[23] Mark Gerstein,et al. Comparing genomes to computer operating systems in terms of the topology and evolution of their regulatory control networks , 2010, Proceedings of the National Academy of Sciences.
[24] Joy Sinha,et al. Reprogramming Bacteria to Seek and Destroy a Herbicide , 2010, Nature chemical biology.