Phylogenetic Relationships and Tempo of Early Diversification in Anolis Lizards

We examine phylogenetic relationships among anoles using mitochondrial DNA se- quences from the NADH dehydrogenase subunit 2 gene (ND2) andve transfer-RNA genes repre- senting 1,455 alignable base positions and 866 phylogenetically informative characters (parsimony criterion). We also present 16 morphological characters for phylogenetic analysis. Our analyses yielded poorly-supported nodes deep in the anole tree but many well-supported nodes for more recent phylogenetic divergences. We test the hypothesis that the major clades of anoles form a hard polytomy and present a general statistical framework for testing hypotheses of simultaneous branching of lineages by using molecular sequence data. Our results suggest that rapid diversi- �cation early in the evolutionary history of anoles explains why numerous researchers have had difculty reconstructing well-supported dichotomous phylogenetic trees for anoles. ( Anolis; mito- chondrial DNA; parametric bootstrap; permutation test; phylogeny; polytomy.)

[1]  M. Miyamoto,et al.  Rapid cladogenesis among the pecoran ruminants: Evidence from mitochondrial dna sequences , 1991 .

[2]  E. Williams West Indian Anoles: a taxonomic and evolutionary summary 1. Introduction and a species list , 1976 .

[3]  M. Soulé,et al.  The Relationships of the Puerto Rican Anolis: Electrophoretic and Karyotypic Studies , 1983 .

[4]  J. S. Wyles,et al.  The Albumin Immunological and Nei Electrophoretic Distance Correlation: A Calibration for the Saurian Genus Anolis (Iguanidae) , 1980 .

[5]  G. Ledyard Stebbins,et al.  The Major Features of Evolution . George Gaylord Simpson. Columbia Univ. Press, New York, 1953. 434 pp. Illus. $7.50 , 1954, Science.

[6]  J. S. Wyles,et al.  The Classification of Anolis: Conflict between Genetic and Osteological Interpretation as Exemplified by Anolis cybotes , 1980 .

[7]  J. Losos Integrative approaches to evolutionary ecology: Anolis lizards as model systems , 1994 .

[8]  J. Felsenstein CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP , 1985, Evolution; international journal of organic evolution.

[9]  J. Cracraft,et al.  Recovering phylogenetic signal from DNA sequences: relationships within the corvine assemblage (class aves) as inferred from complete sequences of the mitochondrial DNA cytochrome-b gene. , 1993, Molecular biology and evolution.

[10]  D. Cannatella,et al.  Phylogenetic Systematics of the Anoles: Is a New Taxonomy Warranted? , 1989 .

[11]  W. Maddison RECONSTRUCTING CHARACTER EVOLUTION ON POLYTOMOUS CLADOGRAMS , 1989, Cladistics : the international journal of the Willi Hennig Society.

[12]  N. Saitou,et al.  The neighbor-joining method: a new method for reconstructing phylogenetic trees. , 1987, Molecular biology and evolution.

[13]  L. Vitt,et al.  A COMPARISON OF EVOLUTIONARY RADIATIONS IN MAINLAND AND CARIBBEAN ANOLIS LIZARDS , 1997 .

[14]  A. Larson The comparison of morphological and molecular data in phylogenetic systematics. , 1994, EXS.

[15]  J. Thompson,et al.  Mitochondrial Dna Phylogeny of the Prodoxidae (Lepidoptera: Incurvarioidea) Indicates Rapid Ecological Diversification of Yucca Moths , 1994 .

[16]  Robert C. Wolpert,et al.  A Review of the , 1985 .

[17]  H. Shaffer,et al.  Tests of turtle phylogeny: molecular, morphological, and paleontological approaches. , 1997, Systematic biology.

[18]  M. Soulé,et al.  Anolis Lizards of the Eastern Caribbean: A Case Study in Evolution. I. Genetic Relationships, Phylogeny, and Colonization Sequence of the Roquet Group , 1974 .

[19]  Daniel P. Faith,et al.  COULD A CLADOGRAM THIS SHORT HAVE ARISEN BY CHANCE ALONE?: ON PERMUTATION TESTS FOR CLADISTIC STRUCTURE , 1991 .

[20]  M. Miyamoto,et al.  Discriminating between phylogenetic signal and random noise in DNA sequences , 1991 .

[21]  G. Gorman,et al.  Anolis Lizards of the Eastern Caribrean: A Case Study in Evolution. II. Genetic Relationships and Genetic Variation of the Bimaculatus Group , 1976 .

[22]  J. Macey,et al.  Evolutionary Shifts in Three Major Structural Features of the Mitochondrial Genome Among Iguanian Lizards , 1997, Journal of Molecular Evolution.

[23]  J. Bull,et al.  An Empirical Test of Bootstrapping as a Method for Assessing Confidence in Phylogenetic Analysis , 1993 .

[24]  M. Soulé,et al.  The Relationships of the Anolis crislatellus Species Group: Electrophoretic Analysis , 1980 .

[25]  J. Sambrook,et al.  Molecular Cloning: A Laboratory Manual , 2001 .

[26]  A. Brower Rapid morphological radiation and convergence among races of the butterfly Heliconius erato inferred from patterns of mitochondrial DNA evolution. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[27]  C. Lieb,et al.  The relationships of Anolis gadovi: albumin immunological evidence. , 1984 .

[28]  S. Hedges,et al.  Molecular insights into the relationships and biogeography of West Indian anoline lizards , 1993 .

[29]  J. Huelsenbeck,et al.  A Likelihood-Ratio Test of Monophyly , 1996 .

[30]  J. S. Wyles,et al.  ANOLIS LIZARDS OF THE EASTERN CARIBBEAN: A CASE STUDY IN EVOLUTION. III. A CLADISTIC ANALYSIS OF ALBUMIN IMMUNOLOGICAL DATA, AND THE DEFINITION OF SPECIES GROUPS , 1980 .

[31]  K. Queiroz**,et al.  A phylogeny of iguanidae , 1988 .

[32]  S. Lair,et al.  Relationships of West Indian Anolis (Sauria: Iguanidae): An Approach Using Slow-Evolving Protein Loci , 1990 .

[33]  E. Williams,et al.  A review of the South American lizard genera Urostrophus and Anisolepis (Squamata: Iguania: Polychridae) , 1991 .

[34]  J. Huelsenbeck,et al.  Signal, noise, and reliability in molecular phylogenetic analyses. , 1992, The Journal of heredity.

[35]  D. Maddison The discovery and importance of multiple islands of most , 1991 .

[36]  E. Williams The Ecology of Colonization as Seen in the Zoogeography of Anoline Lizards on Small Islands. , 1969, The Quarterly Review of Biology.

[37]  R. Etheridge Lizard Caudal Vertebrae , 1967 .

[38]  C. Guyer,et al.  Oadistic relationships among anoles (Sauria: Iguanidae) , 1986 .

[39]  R. Etheridge The abdominal skeleton of lizards in the family Iguanidae , 1965 .

[40]  Re: Homology in phylogenetic analysis: alignment of transfer RNA genes and the phylogenetic position of snakes. , 1997, Molecular phylogenetics and evolution.

[41]  J. Felsenstein Confidence Limits on Phylogenies With a Molecular Clock , 1985 .

[42]  D. Frost,et al.  A Phylogenetic analysis and taxonomy of iguanian lizards (Reptilia, Squamata) / , 1989 .

[43]  A. R. Templeton,et al.  PHYLOGENETIC INFERENCE FROM RESTRICTION ENDONUCLEASE CLEAVAGE SITE MAPS WITH PARTICULAR REFERENCE TO THE EVOLUTION OF HUMANS AND THE APES , 1983, Evolution; international journal of organic evolution.

[44]  D. Faith Cladistic permutation tests for monophyly and nonmonophyly , 1991 .

[45]  James W. Archie,et al.  A randomization test for phylogenetic information in systematic data , 1989 .

[46]  T. Papenfuss,et al.  Two novel gene orders and the role of light-strand replication in rearrangement of the vertebrate mitochondrial genome. , 1997, Molecular biology and evolution.

[47]  C. Guyer,et al.  Anole Systematics Revisited , 1992 .

[48]  S. Hedges,et al.  The Jamaican Radiation of Anolis (Sauria: Iguanidae): An Analysis of Relationships and Biogeography Using Sequential Electrophoresis , 1997 .

[49]  K. Bremer,et al.  BRANCH SUPPORT AND TREE STABILITY , 1994 .

[50]  E. Williams 15. ECOMORPHS, FAUNAS, ISLAND SIZE, AND DIVERSE END POINTS IN ISLAND RADIATIONS OF ANOLIS , 1983 .

[51]  E. Williams,et al.  The cybotoid anoles and Chamaelinorops lizards (Reptilia: Iguanidae): evidence of mosaic evolution , 1987 .

[52]  J. Pounds Ecomorphology, Locomotion, and Microhabitat Structure: Patterns in a Tropical Mainland Anolis Community , 1987 .