Deep Profiling of Mouse Splenic Architecture with CODEX Multiplexed Imaging

[1]  R. Sokal,et al.  A New Statistical Approach to Geographic Variation Analysis , 1969 .

[2]  K. Hartmann,et al.  Successive changes of the cellular composition in lymphoid organs of MRL-Mp/lpr-lpr mice during the development of lymphoproliferative disease as investigated in cryosections. , 1988, Clinical immunology and immunopathology.

[3]  S. Imamura,et al.  Characterization of cutaneous infiltrates in MRL/lpr mice monitored from onset to the full development of lupus erythematosus-like skin lesions. , 1991, The Journal of investigative dermatology.

[4]  A. Abbas,et al.  Anatomy of autoantibody production: dominant localization of antibody-producing cells to T cell zones in Fas-deficient mice. , 1995, Immunity.

[5]  H. Griesser,et al.  Murine lupus in MRL/lpr mice lacking CD4 or CD8 T cells , 1995, European journal of immunology.

[6]  W. Schubert,et al.  Analyzing proteome topology and function by automated multidimensional fluorescence microscopy , 2006, Nature Biotechnology.

[7]  A. Levchenko,et al.  Negative Autoregulation by FAS Mediates Robust Fetal Erythropoiesis , 2007, PLoS biology.

[8]  Stephan Saalfeld,et al.  Globally optimal stitching of tiled 3D microscopic image acquisitions , 2009, Bioinform..

[9]  P. Marrack,et al.  Toll-like receptor 7 (TLR7)-driven accumulation of a novel CD11c⁺ B-cell population is important for the development of autoimmunity. , 2011, Blood.

[10]  Sean C. Bendall,et al.  Single-Cell Mass Cytometry of Differential Immune and Drug Responses Across a Human Hematopoietic Continuum , 2011, Science.

[11]  Michael Y. Gerner,et al.  Histo-cytometry: a method for highly multiplex quantitative tissue imaging analysis applied to dendritic cell subset microanatomy in lymph nodes. , 2012, Immunity.

[12]  P. Chattopadhyay,et al.  Cytometry: today's technology and tomorrow's horizons. , 2012, Methods.

[13]  Qing Li,et al.  Highly multiplexed single-cell analysis of formalin-fixed, paraffin-embedded cancer tissue , 2013, Proceedings of the National Academy of Sciences.

[14]  Albert Cardona,et al.  Sample drift correction following 4D confocal time-lapse imaging. , 2014, Journal of visualized experiments : JoVE.

[15]  M. Colonna,et al.  Transcriptional Programs Define Molecular Characteristics of Innate Lymphoid Cell Classes and Subsets , 2015, Nature Immunology.

[16]  Sean C. Bendall,et al.  An interactive reference framework for modeling a dynamic immune system , 2015, Science.

[17]  B. Burrell,et al.  Lymph Node Stromal Fiber ER-TR7 Modulates CD4+ T Cell Lymph Node Trafficking and Transplant Tolerance , 2015, Transplantation.

[18]  G. Nolan,et al.  Automated Mapping of Phenotype Space with Single-Cell Data , 2016, Nature Methods.

[19]  Sean C. Bendall,et al.  Systemic Immunity Is Required for Effective Cancer Immunotherapy , 2017, Cell.

[20]  P. Marrack,et al.  B cells expressing the transcription factor T-bet drive lupus-like autoimmunity , 2017, The Journal of clinical investigation.

[21]  Nikolay Samusik,et al.  Deep profiling of mouse splenic architecture with CODEX multiplexed imaging , 2017 .

[22]  Nicolas Chevrier Decoding the Body Language of Immunity: Tackling the Immune System at the Organism Level. , 2019, Current opinion in systems biology.