PAUL: protein structural alignment using integer linear programming and Lagrangian relaxation
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[1] Andreas Prlic,et al. SISYPHUS—structural alignments for proteins with non-trivial relationships , 2006, Nucleic Acids Res..
[2] John P. Overington,et al. HOMSTRAD: A database of protein structure alignments for homologous families , 1998, Protein science : a publication of the Protein Society.
[3] D Fischer,et al. A computer vision based technique for 3-D sequence-independent structural comparison of proteins. , 1993, Protein engineering.
[4] C. Sander,et al. Protein structure comparison by alignment of distance matrices. , 1993, Journal of molecular biology.
[5] Peter Lackner,et al. Comparative Analysis of Protein Structure Alignments , 2007, BMC Structural Biology.
[6] Robert D. Carr,et al. 1001 Optimal PDB Structure Alignments: Integer Programming Methods for Finding the Maximum Contact Map Overlap , 2004, J. Comput. Biol..
[7] J. Jung,et al. Protein structure alignment using environmental profiles. , 2000, Protein engineering.
[8] Takeshi Kawabata,et al. MATRAS: a program for protein 3D structure comparison , 2003, Nucleic Acids Res..
[9] P E Bourne,et al. Protein structure alignment by incremental combinatorial extension (CE) of the optimal path. , 1998, Protein engineering.
[10] Adam Godzik,et al. Flexible structure alignment by chaining aligned fragment pairs allowing twists , 2003, ECCB.