Efficient computation with a linear mixed model on large-scale data sets with applications to genetic studies
暂无分享,去创建一个
Matti Pirinen | Peter Donnelly | Chris C. A. Spencer | M. Pirinen | P. Donnelly | C. Spencer | C. Spencer
[1] Jon Wakefield,et al. Bayes factors for genome‐wide association studies: comparison with P‐values , 2009, Genetic epidemiology.
[2] Yurii S. Aulchenko,et al. BIOINFORMATICS APPLICATIONS NOTE doi:10.1093/bioinformatics/btm108 Genetics and population analysis GenABEL: an R library for genome-wide association analysis , 2022 .
[3] Bjarni J. Vilhjálmsson,et al. Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines , 2010 .
[4] M. Stephens,et al. Bayesian statistical methods for genetic association studies , 2009, Nature Reviews Genetics.
[5] Robert H. Halstead,et al. Matrix Computations , 2011, Encyclopedia of Parallel Computing.
[6] Edward S. Buckler,et al. Software engineering the mixed model for genome-wide association studies on large samples , 2009, Briefings Bioinform..
[7] L. Wasserman,et al. Genomic control, a new approach to genetic-based association studies. , 2001, Theoretical population biology.
[8] Andreas Karlsson,et al. Matrix Analysis for Statistics (2nd ed.), by James R. Schott , 2007 .
[9] Ying Wang,et al. Genomewide association study of leprosy. , 2009, The New England journal of medicine.
[10] Zhiwu Zhang,et al. Mixed linear model approach adapted for genome-wide association studies , 2010, Nature Genetics.
[11] D. Reich,et al. Population Structure and Eigenanalysis , 2006, PLoS genetics.
[12] D. Heckerman,et al. Efficient Control of Population Structure in Model Organism Association Mapping , 2008, Genetics.
[13] Ton J. Cleophas,et al. Mixed Linear Models , 2013 .
[14] Jeremiah D. Degenhardt,et al. A Simple Genetic Architecture Underlies Morphological Variation in Dogs , 2010, PLoS biology.
[15] Gene H. Golub,et al. Matrix computations (3rd ed.) , 1996 .
[16] C. Haley,et al. Genomewide Rapid Association Using Mixed Model and Regression: A Fast and Simple Method For Genomewide Pedigree-Based Quantitative Trait Loci Association Analysis , 2007, Genetics.
[17] S. Leal. Genetics and Analysis of Quantitative Traits , 2001 .
[18] R. Fisher. XV.—The Correlation between Relatives on the Supposition of Mendelian Inheritance. , 1919, Transactions of the Royal Society of Edinburgh.
[19] Mark I McCarthy,et al. Genomic inflation factors under polygenic inheritance , 2011, European Journal of Human Genetics.
[20] P. Visscher,et al. Common SNPs explain a large proportion of heritability for human height , 2011 .
[21] David Heckerman,et al. Correction for hidden confounders in the genetic analysis of gene expression , 2010, Proceedings of the National Academy of Sciences.
[22] M. McCarthy,et al. Genome-wide association studies for complex traits: consensus, uncertainty and challenges , 2008, Nature Reviews Genetics.
[23] M. McMullen,et al. A unified mixed-model method for association mapping that accounts for multiple levels of relatedness , 2006, Nature Genetics.
[24] Edward S. Buckler,et al. TASSEL: software for association mapping of complex traits in diverse samples , 2007, Bioinform..
[25] Simon C. Potter,et al. Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis , 2011, Nature.
[26] William J. Astle,et al. Population Structure and Cryptic Relatedness in Genetic Association Studies , 2009, 1010.4681.
[27] James R. Schott,et al. Matrix Analysis for Statistics , 2005 .
[28] L. Penrose,et al. THE CORRELATION BETWEEN RELATIVES ON THE SUPPOSITION OF MENDELIAN INHERITANCE , 2022 .
[29] Simon C. Potter,et al. Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls , 2007, Nature.
[30] P. Armitage. Tests for Linear Trends in Proportions and Frequencies , 1955 .
[31] H. Kang,et al. Variance component model to account for sample structure in genome-wide association studies , 2010, Nature Genetics.