A method for accurate amplification of polymorphic CA-repeat sequences.

Anomalous PCR products are often produced during the amplification of d(CA)n.d(TG)n sequences. Upon denaturing polyacrylamide gel electrophoresis, these products yield a ladder-like pattern that can complicate genotypic interpretation. We have developed two related techniques, referred to as two- and three-stage linear amplification (2-SLA and 3-SLA, respectively), which largely overcome this problem and yield readily interpretable banding patterns.

[1]  G. Gyapay,et al.  A second-generation linkage map of the human genome , 1992, Nature.

[2]  M. Leppert,et al.  A CA repeat 30-70 KB downstream from the adenomatous polyposis coli (APC) gene. , 1991, Nucleic acids research.

[3]  G. M. Lathrop,et al.  Chromosomal mapping of two genetic loci associated with blood-pressure regulation in hereditary hypertensive rats , 1991, Nature.

[4]  Eric S. Lander,et al.  Genetic mapping of a gene causing hypertension in the stroke-prone spontaneously hypertensive rat , 1991, Cell.

[5]  A. Marton,et al.  DNA nicking favors PCR recombination. , 1991, Nucleic Acids Research.

[6]  J. Weber,et al.  Location of facioscapulohumeral muscular dystrophy gene on chromosome 4 , 1990, The Lancet.

[7]  F D Ledley,et al.  Disruption of phase during PCR amplification and cloning of heterozygous target sequences. , 1990, Nucleic acids research.

[8]  J. Hartley,et al.  Use of uracil DNA glycosylase to control carry-over contamination in polymerase chain reactions. , 1990, Gene.

[9]  D. Garling,et al.  Minimizing the time required for DNA amplification by efficient heat transfer to small samples. , 1990, Analytical biochemistry.

[10]  A. Meyerhans,et al.  DNA recombination during PCR. , 1990, Nucleic acids research.

[11]  S. Pääbo,et al.  DNA damage promotes jumping between templates during enzymatic amplification. , 1990, The Journal of biological chemistry.

[12]  D. Tautz Hypervariability of simple sequences as a general source for polymorphic DNA markers. , 1989, Nucleic acids research.

[13]  J. Weber,et al.  Abundant class of human DNA polymorphisms which can be typed using the polymerase chain reaction. , 1989, American journal of human genetics.

[14]  M. Litt,et al.  A hypervariable microsatellite revealed by in vitro amplification of a dinucleotide repeat within the cardiac muscle actin gene. , 1989, American journal of human genetics.

[15]  K. Mullis,et al.  Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase. , 1988, Science.

[16]  R. Chambers,et al.  Synthesis and properties of oligodeoxynucleotides with an AP site at a preselected position. , 1987, Nucleic acids research.

[17]  H. Hamada,et al.  A novel repeated element with Z-DNA-forming potential is widely found in evolutionarily diverse eukaryotic genomes. , 1982, Proceedings of the National Academy of Sciences of the United States of America.

[18]  H. Donis-Keller,et al.  A comprehensive genetic linkage map of the human genome. NIH/CEPH Collaborative Mapping Group. , 1992, Science.