Demonstrating the scalability of a molecular dynamics application on a Petaflop computer
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José E. Moreira | Marc Snir | Monty Denneau | Mark Giampapa | José G. Castaños | Derek Lieber | Calin Cascaval | Dennis M. Newns | C. T. Howard Ho | Maria Eleftheriou | George S. Almási | Wilm E. Donath | Henry S. Warren | H. S. Warren | W. Donath | M. Snir | C. T. Ho | C. Cascaval | G. Almási | J. Moreira | M. Eleftheriou | J. Castaños | M. Denneau | M. Giampapa | D. Lieber | D. Newns
[1] Josep Torrellas,et al. Toward a cost-effective DSM organization that exploits processor-memory integration , 2000, Proceedings Sixth International Symposium on High-Performance Computer Architecture. HPCA-6 (Cat. No.PR00550).
[2] Vivek Sarkar,et al. Baring It All to Software: Raw Machines , 1997, Computer.
[3] Larry A. Bergman,et al. A design analysis of a hybrid technology multithreaded architecture for petaflops scale computation3 , 1999, ICS '99.
[4] P. P. Ewald. Die Berechnung optischer und elektrostatischer Gitterpotentiale , 1921 .
[5] Ajay K. Royyuru,et al. Blue Gene: A vision for protein science using a petaflop supercomputer , 2001, IBM Syst. J..
[6] Mark E. Tuckerman,et al. Reversible multiple time scale molecular dynamics , 1992 .
[7] Dean M. Tullsen,et al. Simultaneous multithreading: a platform for next-generation processors , 1997, IEEE Micro.
[8] Frederic T. Chong,et al. Active pages: a computation model for intelligent memory , 1998, ISCA.
[9] Christoforos E. Kozyrakis,et al. A case for intelligent RAM , 1997, IEEE Micro.
[10] L. Verlet. Computer "Experiments" on Classical Fluids. I. Thermodynamical Properties of Lennard-Jones Molecules , 1967 .
[11] M. Karplus,et al. CHARMM: A program for macromolecular energy, minimization, and dynamics calculations , 1983 .
[12] Seung-Moon Yoo,et al. FlexRAM: toward an advanced intelligent memory system , 1999, Proceedings 1999 IEEE International Conference on Computer Design: VLSI in Computers and Processors (Cat. No.99CB37040).
[13] Katherine Yelick,et al. A Case for Intelligent RAM: IRAM , 1997 .
[14] J. Banavar,et al. Computer Simulation of Liquids , 1988 .
[15] David W. Christianson,et al. Novel Binding Mode of Hydroxamate Inhibitors to Human Carbonic Anhydrase II , 1997 .
[16] Dean M. Tullsen,et al. Simultaneous multithreading: Maximizing on-chip parallelism , 1995, Proceedings 22nd Annual International Symposium on Computer Architecture.
[17] Jaewook Shin,et al. Mapping Irregular Applications to DIVA, a PIM-based Data-Intensive Architecture , 1999, ACM/IEEE SC 1999 Conference (SC'99).
[18] P.M. Kogge,et al. Pursuing a petaflop: point designs for 100 TF computers using PIM technologies , 1996, Proceedings of 6th Symposium on the Frontiers of Massively Parallel Computation (Frontiers '96).
[19] William J. Dally,et al. A bandwidth-efficient architecture for media processing , 1998, Proceedings. 31st Annual ACM/IEEE International Symposium on Microarchitecture.
[20] Steve Plimpton,et al. Fast parallel algorithms for short-range molecular dynamics , 1993 .
[21] Valerie E. Taylor,et al. Parallel Molecular Dynamics: Implications for Massively Parallel Machines , 1997, J. Parallel Distributed Comput..