Identification and quantification of abundant species from pyrosequences of 16S rRNA by consensus alignment
暂无分享,去创建一个
[1] R. Knight,et al. The influence of sex, handedness, and washing on the diversity of hand surface bacteria , 2008, Proceedings of the National Academy of Sciences.
[2] William G. Mckendree,et al. ESPRIT: estimating species richness using large collections of 16S rRNA pyrosequences , 2009, Nucleic acids research.
[3] R. Knight,et al. Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex , 2008, Nature Methods.
[4] Pavel A. Pevzner,et al. De novo identification of repeat families in large genomes , 2005, ISMB.
[5] S. Tringe,et al. Quantitative Phylogenetic Assessment of Microbial Communities in Diverse Environments , 2007, Science.
[6] Forest Rohwer,et al. FastGroupII: A web-based bioinformatics platform for analyses of large 16S rDNA libraries , 2006, BMC Bioinformatics.
[7] Susan M. Huse,et al. Accuracy and quality of massively parallel DNA pyrosequencing , 2007, Genome Biology.
[8] Eoin L. Brodie,et al. Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB , 2006, Applied and Environmental Microbiology.
[9] Bin Ma,et al. Finding similar regions in many strings , 1999, STOC '99.
[10] A. Uitterlinden,et al. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA , 1993, Applied and environmental microbiology.
[11] R. Knight,et al. Bacterial Community Variation in Human Body Habitats Across Space and Time , 2009, Science.
[12] Martin Hartmann,et al. Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities , 2009, Applied and Environmental Microbiology.
[13] J. Eisen,et al. A simple, fast, and accurate method of phylogenomic inference , 2008, Genome Biology.
[14] Naoji Yubuki,et al. Ultrastructure and molecular phylogenetic position of a novel euglenozoan with extrusive episymbiotic bacteria: Bihospites bacati n. gen. et sp. (Symbiontida) , 2010, BMC Microbiology.
[15] Adam Godzik,et al. Clustering of highly homologous sequences to reduce the size of large protein databases , 2001, Bioinform..
[16] C. Quince,et al. Accurate determination of microbial diversity from 454 pyrosequencing data , 2009, Nature Methods.
[17] Susan M. Huse,et al. Pyrosequencing analysis of the Oral Microflora of healthy adults , 2008, Journal of dental research.
[18] James R. Cole,et al. The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis , 2004, Nucleic Acids Res..