论文信息 - Content discovery and retrieval services at the European Nucleotide Archive

Content discovery and retrieval services at the European Nucleotide Archive

The European Nucleotide Archive (ENA; http://www.ebi.ac.uk/ena) is Europe's primary resource for nucleotide sequence information. With the growing volume and diversity of public sequencing data comes the need for increased sophistication in data organisation, presentation and search services so as to maximise its discoverability and usability. In response to this, ENA has been introducing and improving checklists for use during submission and expanding its search facilities to provide targeted search results. Here, we give a brief update on ENA content and some major developments undertaken in data submission services during 2014. We then describe in more detail the services we offer for data discovery and retrieval.

[1] Anton J. Enright,et al. RNAcentral: A vision for an international database of RNA sequences. , 2011, RNA.

[2] G. Cochrane,et al. The International Nucleotide Sequence Database Collaboration , 2011, Nucleic Acids Res..

[3] Hsien-Da Huang,et al. RNAcentral: an international database of ncRNA sequences , 2014, Nucleic Acids Res..

[4] Matthew Fraser,et al. EBI metagenomics—a new resource for the analysis and archiving of metagenomic data , 2013, Nucleic Acids Res..

[5] Marco Brandizi,et al. Updates to BioSamples database at European Bioinformatics Institute , 2014, Nucleic Acids Res..

[6] Philip L. F. Johnson,et al. The complete genome sequence of a Neanderthal from the Altai Mountains , 2013 .

[7] Rodrigo Lopez,et al. Assembly information services in the European Nucleotide Archive , 2013, Nucleic Acids Res..

[8] Guy Cochrane,et al. The International Nucleotide Sequence Database Collaboration , 2011, Nucleic Acids Res..

[9] Emily S. Charlson,et al. Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications , 2011, Nature Biotechnology.