New Approaches to Prediction of Immune Responses to Therapeutic Proteins during Preclinical Development

Clinical studies show that immunogenicity observed against therapeutic proteins can limit efficacy and reduce the safety of the treatment. It is therefore beneficial to be able to predict the immunogenicity of therapeutic proteins before they enter the clinic. Studies using deimmunized proteins have highlighted the importance of T-cell epitopes in the generation of undesirable immunogenicity. In silico, in vitro, ex vivo and in vivo methods have therefore been developed that focus on identification of CD4+ T-cell epitopes in the sequence of therapeutic proteins. A case study of existing therapeutic proteins is presented to review these different approaches in order to assess their utility in predicting immunogenic potential.

[1]  W. Jiskoot,et al.  Development of a Transgenic Mouse Model Immune Tolerant for Human Interferon Beta , 2005, Pharmaceutical Research.

[2]  M. E. Reid,et al.  Thrombocytopenia caused by the development of antibodies to thrombopoietin , 2002 .

[3]  S. Vallabhajosula,et al.  Vascular targeted therapy with anti-prostate-specific membrane antigen monoclonal antibody J591 in advanced solid tumors. , 2007, Journal of clinical oncology : official journal of the American Society of Clinical Oncology.

[4]  P. Kivisäkk,et al.  Neutralising and binding anti-interferon-β-1 b (IFN-b-1 b) antibodies during IFN-β-1 b treatment of multiple sclerosis , 1997 .

[5]  A. Sanyal,et al.  Antibody-Mediated Pure Red Cell Aplasia Due to Epoetin Alfa During Antiviral Therapy of Chronic Hepatitis C , 2005, The American Journal of Gastroenterology.

[6]  R. Zinkernagel,et al.  Neutralizing antiviral B cell responses. , 1997, Annual review of immunology.

[7]  R. Kennedy,et al.  Nonhuman primate models to evaluate vaccine safety and immunogenicity. , 1997, Vaccine.

[8]  U. Şahin,et al.  Generation of tissue-specific and promiscuous HLA ligand databases using DNA microarrays and virtual HLA class II matrices , 1999, Nature Biotechnology.

[9]  C. Begley,et al.  Recombinant human thrombopoietin: basic biology and evaluation of clinical studies. , 2002, Blood.

[10]  Ellis L. Reinherz,et al.  Enhancement to the RANKPEP resource for the prediction of peptide binding to MHC molecules using profiles , 2004, Immunogenetics.

[11]  Gopi Shankar,et al.  Scientific and regulatory considerations on the immunogenicity of biologics. , 2006, Trends in biotechnology.

[12]  A. Valdés,et al.  The HLA-DR2 haplotype is associated with an increased proliferative response to the immunodominant CD4+ T-cell epitope in human interferon-β , 2004, Genes and Immunity.

[13]  A. Nesbitt,et al.  Comprehensive pharmacokinetics of a humanized antibody and analysis of residual anti-idiotypic responses. , 1995, Immunology.

[14]  A. Scott,et al.  Safety, pharmacokinetic and dosimetry evaluation of the proposed thrombus imaging agent 99mTc-DI-DD-3B6/22-80B3 Fab′ , 2006, European Journal of Nuclear Medicine and Molecular Imaging.

[15]  M. Urowitz,et al.  CAMPATH-1H, a humanized monoclonal antibody, in refractory rheumatoid arthritis. An intravenous dose-escalation study. , 1995, Arthritis and rheumatism.

[16]  Nicki Panoskaltsis,et al.  Cytokine storm in a phase 1 trial of the anti-CD28 monoclonal antibody TGN1412. , 2006, The New England journal of medicine.

[17]  Marcia Stickler,et al.  Elimination of an Immunodominant CD4+ T Cell Epitope in Human IFN-β Does Not Result in an In Vivo Response Directed at the Subdominant Epitope , 2004, The Journal of Immunology.

[18]  M. Rosenberg,et al.  Humoral response of cynomolgus macaques to human soluble CD4: antibody reactivity restricted to xeno-human determinants. , 1990, Cellular immunology.

[19]  N. Bander,et al.  Targeted systemic therapy of prostate cancer with a monoclonal antibody to prostate-specific membrane antigen. , 2003, Seminars in oncology.

[20]  G. Giovannoni,et al.  The Rebif® New Formulation Story , 2007, Drugs in R&D.

[21]  T. Jones,et al.  Identification and removal of immunogenicity in therapeutic proteins. , 2007, Current opinion in drug discovery & development.

[22]  N. G. Groot,et al.  Major histocompatibility complex class II polymorphisms in primates , 1999, Immunological reviews.

[23]  C. Yang,et al.  Thrombocytopenia caused by the development of antibodies to thrombopoietin. , 2001, Blood.

[24]  C. Fiehn,et al.  Anti-Interferon-γ Antibodies in a Patient Undergoing Interferon-γ Treatment for Systemic Mastocytosis , 1996 .

[25]  John Sidney,et al.  Rationally Engineered Therapeutic Proteins with Reduced Immunogenicity , 2005, The Journal of Immunology.

[26]  N. Casadevall Pure red cell aplasia and anti-erythropoietin antibodies in patients treated with epoetin. , 2003, Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association.

[27]  G. Alexander,et al.  The development of a modified human IFN-alpha2b linked to the Fc portion of human IgG1 as a novel potential therapeutic for the treatment of hepatitis C virus infection. , 2004, Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research.

[28]  J. Saint-Remy,et al.  Von Willebrand Factor Modulates Factor VIII Immunogenicity: Comparative Study of Different Factor VIII Concentrates in a Haemophilia A Mouse Model , 2002, Thrombosis and Haemostasis.

[29]  N. Bander,et al.  Clinical use of monoclonal antibody HuJ591 therapy: targeting prostate specific membrane antigen. , 2003, The Journal of urology.

[30]  T. Baglin,et al.  Identification and removal of a promiscuous CD4+ T cell epitope from the C1 domain of factor VIII , 2005, Journal of thrombosis and haemostasis : JTH.

[31]  Morten Nielsen,et al.  Prediction of MHC class II binding affinity using SMM-align, a novel stabilization matrix alignment method , 2007, BMC Bioinformatics.

[32]  H. Scher,et al.  Recombinant soluble prostate-specific membrane antigen (rsPSMA) vaccine: Preliminary findings of a Phase I safety/immunogenicity trial. , 2004, Journal of clinical oncology : official journal of the American Society of Clinical Oncology.

[33]  P. Bugelski,et al.  Predictive power of preclinical studies in animals for the immunogenicity of recombinant therapeutic proteins in humans. , 2004, Current opinion in molecular therapeutics.

[34]  R Thorpe,et al.  Immunogenicity of granulocyte-macrophage colony-stimulating factor (GM-CSF) products in patients undergoing combination therapy with GM-CSF. , 1999, Clinical cancer research : an official journal of the American Association for Cancer Research.

[35]  A. Jaber,et al.  Assessment of the immunogenicity of different interferon beta-1a formulations using ex vivo T-cell assays. , 2007, Journal of pharmaceutical and biomedical analysis.

[36]  R. Schooley,et al.  Recombinant soluble CD4 therapy in patients with the acquired immunodeficiency syndrome (AIDS) and AIDS-related complex. A phase I-II escalating dosage trial. , 1990, Annals of internal medicine.

[37]  Markus G. Manz,et al.  Development of a Human Adaptive Immune System in Cord Blood Cell-Transplanted Mice , 2004, Science.

[38]  Gajendra P. S. Raghava,et al.  ProPred: prediction of HLA-DR binding sites , 2001, Bioinform..

[39]  D. Collen,et al.  On the Immunogenicity of Recombinant Staphylokinase in Patients and in Animal Models , 1994, Thrombosis and Haemostasis.

[40]  S. Vallabhajosula,et al.  Radioimmunotherapy of Prostate Cancer Using 90Y- and 177Lu-Labeled J591 Monoclonal Antibodies: Effect of Multiple Treatments on Myelotoxicity , 2005, Clinical Cancer Research.

[41]  R. Mutani,et al.  Interferon beta neutralizing antibodies in multiple sclerosis: neutralizing activity and cross-reactivity with three different preparations. , 2000, Immunopharmacology.

[42]  J. Vielmetter,et al.  Clinical link between MHC class II haplotype and interferon-beta (IFN-beta) immunogenicity. , 2006, Clinical immunology.

[43]  Shankar Vallabhajosula,et al.  Phase I trial of 177lutetium-labeled J591, a monoclonal antibody to prostate-specific membrane antigen, in patients with androgen-independent prostate cancer. , 2005, Journal of clinical oncology : official journal of the American Society of Clinical Oncology.

[44]  E. Reinherz,et al.  Prediction of MHC class I binding peptides using profile motifs. , 2002, Human immunology.

[45]  A. Schoppmann,et al.  A caution on the use of murine hemophilia models for comparative immunogenicity studies of FVIII products with different protein compositions , 2003, Thrombosis and Haemostasis.

[46]  Huub Schellekens,et al.  Structural Characterization and Immunogenicity in Wild-Type and Immune Tolerant Mice of Degraded Recombinant Human Interferon Alpha2b , 2005, Pharmaceutical Research.