Simultaneous selection of nanobodies for accessible epitopes on immune cells in the tumor microenvironment
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J. Meiler | T. Sekar | T. Aguilera | M. Whitney | Katy L. Swancutt | Sebastian Diegeler | E. Elghonaimy | Cristina E. Martina | Isaac Gonzalez | Cassandra Hamilton | Peter Q. Leung
[1] M. Araúzo-Bravo,et al. The need to reassess single-cell RNA sequencing datasets: the importance of biological sample processing , 2021, F1000Research.
[2] Oriol Vinyals,et al. Highly accurate protein structure prediction with AlphaFold , 2021, Nature.
[3] Jason W. Labonte,et al. Ensuring scientific reproducibility in bio-macromolecular modeling via extensive, automated benchmarks , 2021, Nature Communications.
[4] Benjamin K. Mueller,et al. Modeling Immunity with Rosetta: Methods for Antibody and Antigen Design , 2021, Biochemistry.
[5] Zemin Zhang,et al. The history and advances in cancer immunotherapy: understanding the characteristics of tumor-infiltrating immune cells and their therapeutic implications , 2020, Cellular & Molecular Immunology.
[6] Brian D. Weitzner,et al. Macromolecular modeling and design in Rosetta: recent methods and frameworks , 2020, Nature Methods.
[7] J. Wolchok,et al. The future of cancer immunotherapy: microenvironment-targeting combinations , 2020, Cell Research.
[8] Jeffrey J. Gray,et al. Robustification of RosettaAntibody and Rosetta SnugDock , 2020, bioRxiv.
[9] Jeffrey J. Gray,et al. An expanded benchmark for antibody-antigen docking and affinity prediction reveals insights into antibody recognition determinants. , 2020, Structure.
[10] E. Kenigsberg,et al. A conserved dendritic-cell regulatory program limits antitumour immunity , 2020, Nature.
[11] Nathan E. Reticker-Flynn,et al. Melanoma-Secreted Lysosomes Trigger Monocyte-Derived Dendritic Cell Apoptosis and Limit Cancer Immunotherapy , 2020, Cancer Research.
[12] A. Koong,et al. Induced Tumor Heterogeneity Reveals Factors Informing Radiation and Immunotherapy Combinations , 2020, Clinical Cancer Research.
[13] N. Slavov. Unpicking the proteome in single cells , 2020, Science.
[14] P. Hegde,et al. Top 10 Challenges in Cancer Immunotherapy. , 2020, Immunity.
[15] T. Lassmann,et al. Systematic assessment of tissue dissociation and storage biases in single-cell and single-nucleus RNA-seq workflows , 2019, Genome Biology.
[16] H. Kosako,et al. Structural Basis of Mitochondrial Scaffolds by Prohibitin Complexes: Insight into a Role of the Coiled-Coil Region , 2019, iScience.
[17] Yun-Gui Yang,et al. Single-cell RNA-seq highlights intra-tumoral heterogeneity and malignant progression in pancreatic ductal adenocarcinoma , 2019, Cell Research.
[18] G. Evan,et al. Myc instructs and maintains pancreatic adenocarcinoma phenotype , 2019, bioRxiv.
[19] Nobel work that galvanized an industry , 2018, Nature Biotechnology.
[20] William Sheffler,et al. Efficient Flexible Backbone Protein-Protein Docking for Challenging Targets , 2017, bioRxiv.
[21] Ambrose J. Carr,et al. Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment , 2018, Cell.
[22] Brian D. Weitzner,et al. RosettaAntibodyDesign (RAbD): A general framework for computational antibody design , 2017, bioRxiv.
[23] O. Podhajcer,et al. Single-Domain Antibodies and the Promise of Modular Targeting in Cancer Imaging and Treatment , 2018, Front. Immunol..
[24] David Baker,et al. Comprehensive computational design of ordered peptide macrocycles , 2017, Science.
[25] G. Evan,et al. Myc Cooperates with Ras by Programming Inflammation and Immune Suppression , 2017, Cell.
[26] G. González-Sapienza,et al. Single-Domain Antibodies As Versatile Affinity Reagents for Analytical and Diagnostic Applications , 2017, Front. Immunol..
[27] Sean C. Bendall,et al. Systemic Immunity Is Required for Effective Cancer Immunotherapy , 2017, Cell.
[28] H. Stehr,et al. Reprogramming the immunological microenvironment through radiation and targeting Axl , 2016, Nature Communications.
[29] Brian D. Weitzner,et al. Modeling and docking of antibody structures with Rosetta , 2017, Nature Protocols.
[30] Jens Meiler,et al. Improving Loop Modeling of the Antibody Complementarity-Determining Region 3 Using Knowledge-Based Restraints , 2016, PloS one.
[31] Mikhail Pogorelyy,et al. VDJtools: Unifying Post-analysis of T Cell Receptor Repertoires , 2015, PLoS Comput. Biol..
[32] Sean C. Bendall,et al. An interactive reference framework for modeling a dynamic immune system , 2015, Science.
[33] T. Gajewski,et al. Melanoma-intrinsic β-catenin signalling prevents anti-tumour immunity , 2015, Nature.
[34] Edgar G. Engleman,et al. Allogeneic IgG combined with dendritic cell stimuli induces anti-tumor T cell immunity , 2015, Nature.
[35] Elizabeth L. Sander,et al. Rarefaction and extrapolation with Hill numbers: a framework for sampling and estimation in species diversity studies , 2014 .
[36] Serge Muyldermans,et al. Nanobodies: natural single-domain antibodies. , 2013, Annual review of biochemistry.
[37] R. Hodes,et al. This information is current as in B Lymphocytes CD 86 Cooperate To Mediate CD 86 Signaling Prohibitins and the Cytoplasmic Domain of Hodes , 2012 .
[38] R. Cardiff,et al. Early vascular deficits are correlated with delayed mammary tumorigenesis in the MMTV-PyMT transgenic mouse following genetic ablation of the NG2 proteoglycan , 2012, Breast Cancer Research.
[39] Beth Friedman,et al. Fluorescent peptides highlight peripheral nerves during surgery in mice , 2011, Nature Biotechnology.
[40] Kenneth W Dunn,et al. A practical guide to evaluating colocalization in biological microscopy. , 2011, American journal of physiology. Cell physiology.
[41] R. Tsien,et al. Parallel in Vivo and in Vitro Selection Using Phage Display Identifies Protease-dependent Tumor-targeting Peptides* , 2010, The Journal of Biological Chemistry.
[42] S. Muyldermans,et al. Nanobodies as Tools for In Vivo Imaging of Specific Immune Cell Types , 2010, Journal of Nuclear Medicine.
[43] Jeffrey J. Gray,et al. SnugDock: Paratope Structural Optimization during Antibody-Antigen Docking Compensates for Errors in Antibody Homology Models , 2010, PLoS Comput. Biol..
[44] D. Koller,et al. The Immunological Genome Project: networks of gene expression in immune cells , 2008, Nature Immunology.
[45] Vadim Zinchuk,et al. Quantitative Colocalization Analysis of Multicolor Confocal Immunofluorescence Microscopy Images: Pushing Pixels to Explore Biological Phenomena , 2007, Acta histochemica et cytochemica.
[46] F. Cordelières,et al. A guided tour into subcellular colocalization analysis in light microscopy , 2006, Journal of microscopy.
[47] Jeffrey J. Gray,et al. High-resolution protein-protein docking. , 2006, Current opinion in structural biology.
[48] E. Ruoslahti,et al. Antitumor activity of a homing peptide that targets tumor lymphatics and tumor cells. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[49] Simon C Watkins,et al. Identification of a synovial fibroblast-specific protein transduction domain for delivery of apoptotic agents to hyperplastic synovium. , 2003, Molecular therapy : the journal of the American Society of Gene Therapy.
[50] Erkki Ruoslahti,et al. Organ targeting In vivo using phage display peptide libraries , 1996, Nature.
[51] S. Muyldermans,et al. Naturally occurring antibodies devoid of light chains , 1993, Nature.