Identification of Enolase 1 as a Potential Target for Magnaporthe oryzae: Integrated Proteomic and Molecular Dynamics Simulation

Rice blast is an essential factor affecting rice yield and quality, which is caused by Magnaporthe oryzae (M. oryzae). Isobavachalcone (IBC) is a botanical fungicide derived from the seed extract of the Leguminosae plant Psoralea corylifolia L. and has shown an excellent rice blast control effect in field applications. To explore the potential targets of rice blast control, the analysis of the differentially expressed proteins (DEPs) between the liquid culture medium of mycelium treated by 10 mg/L of IBC for 2 h and the control group indicated that Enolase 1 (ENO1) was the most significantly down-regulated DEP with a fold change value of 0.305. In vitro experiments showed that after treating liquid culture mycelium with 10 mg/L of IBC for 0.5, 1, 2, 4, and 8 h, the enzymatic activity of ENO1 in the IBC experimental groups was 0.97, 0.75, 0.52, 0.44, and 0.39 times as much as in the control groups, respectively. To further explore the molecular interaction and binding mode between IBC and ENO1, the three-dimensional structure of ENO1 was established based on homology modeling. Molecular docking and molecular dynamics simulation showed that IBC had a pi-pi stacking effect with the residue TYR_365, a hydrogen bond interaction with the residue ARG_393, and hydrophobic interactions with non-polar residues ALA_361, LYS_362, and VAL_371 of ENO1. These findings indicated that ENO1 is a potential target of M. oryzae, which would pave the way for screening novel effective fungicides targeting ENO1.

[1]  Yue Zhang,et al.  Methoxyacrylate Fungicide Candidate CL-15C Also Functions as a Plant Elicitor in Arabidopsis thaliana and Oryza sativa L. , 2022, Journal of Agricultural and Food Chemistry.

[2]  Youjin Hao,et al.  Computational Methods for the Interaction between Cyclodextrins and Natural Compounds: Technology, Benefits, Limitations, and Trends. , 2022, Journal of agricultural and food chemistry.

[3]  Fanglu Ma,et al.  Research advances in function and regulation mechanisms of plant small heat shock proteins (sHSPs) under environmental stresses. , 2022, The Science of the total environment.

[4]  Hailong Yang,et al.  Proteomics Reveals the Mechanism Underlying the Autolysis of Postharvest Coprinus comatus Fruiting Bodies. , 2022, Journal of agricultural and food chemistry.

[5]  Mengying Zhou,et al.  Modification of PAE-degrading Esterase(CarEW) for Higher Degradation Efficiency Through Integrated Homology Modeling, Molecular Docking, and Molecular Dynamics Simulation , 2022, Chemical Research in Chinese Universities.

[6]  Lucas N. Alberca,et al.  Homology Modeling and Molecular Dynamics Simulations of Trypanosoma cruzi Phosphodiesterase b1 , 2021, Chemistry & biodiversity.

[7]  Xiukun Lin,et al.  Enolase 1, a Moonlighting Protein, as a Potential Target for Cancer Treatment , 2021, International journal of biological sciences.

[8]  Hu Zhou,et al.  Efficacy of Plant Growth-Promoting Bacteria Bacillus cereus YN917 for Biocontrol of Rice Blast , 2021, Frontiers in Microbiology.

[9]  Jiyu Zhang,et al.  Integrated Proteomics and Transcriptomics Analyses Reveals the Possible Antifungal Mechanism of an Indoloquinoline Alkaloid Neocryptolepine against Rhizoctonia solani. , 2021, Journal of Agricultural and Food Chemistry.

[10]  Jian Wang,et al.  Identification of Pyruvate Dehydrogenase E1 as a Potential Target against Magnaporthe oryzae through Experimental and Theoretical Investigation , 2021, International journal of molecular sciences.

[11]  Chennu M.M.Prasada Rao,et al.  Molecular docking and dynamic simulations of benzimidazoles with beta-tubulins , 2021, Bioinformation.

[12]  H. van Tilbeurgh,et al.  A new family of structurally conserved fungal effectors displays epistatic interactions with plant resistance proteins , 2020, bioRxiv.

[13]  M. Rapala-Kozik,et al.  Als3‐mediated attachment of enolase on the surface of Candida albicans cells regulates their interactions with host proteins , 2020, Cellular microbiology.

[14]  R. DePinho,et al.  An Enolase Inhibitor for the Targeted Treatment of ENO1-Deleted Cancers , 2020, Nature Metabolism.

[15]  Long Yu,et al.  Enolase 1 regulates stem cell-like properties in gastric cancer cells by stimulating glycolysis , 2020, Cell Death & Disease.

[16]  Md. Belal Hossain,et al.  Review: Rice Blast Disease , 2020 .

[17]  K. Gomi,et al.  Alternative transcription start sites of the enolase-encoding gene enoA are stringently used in glycolytic/gluconeogenic conditions in Aspergillus oryzae , 2020, Current Genetics.

[18]  S. R. Devkota A REVIEW ON VARIOUS MANAGEMENT METHOD OF RICE BLAST DISEASE , 2020, Malaysian Journal of Sustainable Agriculture.

[19]  U. Jeschke,et al.  Anti α-enolase antibody is a novel autoimmune biomarker for unexplained recurrent miscarriages , 2019, EBioMedicine.

[20]  C. Slingluff,et al.  Impaired enolase 1 glycolytic activity restrains effector functions of tumor-infiltrating CD8+ T cells , 2019, Science Immunology.

[21]  Jian Wang,et al.  Identification of isobavachalcone as a potential drug for rice blast disease caused by the fungus Magnaporthe grisea , 2018, Journal of biomolecular structure & dynamics.

[22]  S. Lian,et al.  Progress in the biological function of alpha-enolase , 2016, Animal nutrition.

[23]  C. Der,et al.  Rho guanine nucleotide exchange factors: regulators of Rho GTPase activity in development and disease , 2014, Oncogene.

[24]  A. Dhingra,et al.  Psoralea corylifolia L. (Buguchi) - folklore to modern evidence: review. , 2013, Fitoterapia.

[25]  C. Chen,et al.  Candida albicans ENO1 null mutants exhibit altered drug susceptibility, hyphal formation, and virulence , 2013, Journal of Microbiology.

[26]  Á. Díaz-Ramos,et al.  α-Enolase, a Multifunctional Protein: Its Role on Pathophysiological Situations , 2012, Journal of biomedicine & biotechnology.

[27]  Antonio Di Pietro,et al.  The Top 10 fungal pathogens in molecular plant pathology. , 2012, Molecular plant pathology.

[28]  C. Ding,et al.  Enzymatic and biological characteristics of enolase in Brucella abortus A19 , 2012, Molecular Biology Reports.

[29]  H. L. Wang,et al.  Expression profiles of PtrLOS2 encoding an enolase required for cold-responsive gene transcription from trifoliate orange , 2011, Biologia Plantarum.

[30]  G. Chang,et al.  Anti-alpha-enolase autoantibodies are down-regulated in advanced cancer patients. , 2010, Japanese journal of clinical oncology.

[31]  A. Scarpa,et al.  An integrated humoral and cellular response is elicited in pancreatic cancer by α‐enolase, a novel pancreatic ductal adenocarcinoma‐associated antigen , 2009, International journal of cancer.

[32]  R. Contreras,et al.  An antisense-based functional genomics approach for identification of genes critical for growth of Candida albicans , 2001, Nature Biotechnology.

[33]  A. Stringaro,et al.  Identification of a glucan-associated enolase as a main cell wall protein of Candida albicans and an indirect target of lipopeptide antimycotics. , 1996, The Journal of infectious diseases.