Ternary complex formation between elongation factor Tu, GTP and aminoacyl-tRNA: an equilibrium study.

The equilibria between the elongation factor Tu-GTP complex (EF-Tu-GTP) from Escherichia coli and tyrosyl-tRNATyr from E. coli as well as phenylalanyl-tRNAPhe and seryl-tRNASer from yeast were studied using a novel procedure, which takes advantage of the protective effect of ternary complex formation on the stability of theaminoacyl bond against non-enzymatic hydrolysis. At 25 degrees C and at pH 7.4 tyrosyl-tRNATyr, phenylalanyl-tRNAPhe and seryl-tRNASer are bound with binding constants of 0.7 X 10(7) M-1, 5.0 X 10(7) M-1 and 0.5 X 10(7) M-1 respectively. The binding of aminoacyl-tRNA to EF-Tu-GTP has a negative deltaH of the order of 10 kcal/mol (42 kJ/mol). Complex formation is dependent on ionic strength: with 0.1 M KCl Kass = 0.8 X 10(7) M-1, with 0.5 M KCl Kass = 0.2 X 10(7) M-1 was determined for the binding of Tyr-tRNATyr.

[1]  D. Riesner,et al.  Mechanism of discrimination between cognate and non-cognate tRNAs by phenylalanyl-tRNA synthetase from yeast. , 1976, European journal of biochemistry.

[2]  D. Riesner,et al.  Distinct steps in the specific binding of tRNA to aminoacyl-tRNA synthetase. Temperature-jump studies on the serine-specific system from yeast and the tyrosine-specific system from Escherichia coli. , 1976, European journal of biochemistry.

[3]  A. Furano The subcellular distribution and state of the elongation factor Tu in extracts of Escherichia coli B. , 1976, European journal of biochemistry.

[4]  A. Wittinghofer,et al.  Elongation factor T from Bacillus stearothermophilus and Escherichia coli. Purification and some properties of EF-Tu and EF-Ts from Bacillus stearothermophilus. , 1976, European journal of biochemistry.

[5]  A. Furano Content of elongation factor Tu in Escherichia coli. , 1975, Proceedings of the National Academy of Sciences of the United States of America.

[6]  D. Riesner,et al.  Anti‐Cooperative Binding of Two tRNATyr Molecules to Tyrosyl‐tRNA Synthetase from Escherichia coli , 1975 .

[7]  D. Ringer,et al.  Interaction of elongation factor Tu with 2'(3')-O-aminoacyloligonucleotides derived from the 3' terminus of aminoacyl-tRNA. , 1975, Proceedings of the National Academy of Sciences of the United States of America.

[8]  J. Bonnet,et al.  Quantitative study of the ionic interactions between yeast tRNAVal and tRNAPhe and their cognate aminoacyl‐tRNA ligases , 1975, FEBS letters.

[9]  S. Tanada,et al.  Properties of Alanyl‐oligonucleotide, Puromycin, and Staphylococcus epidermidis glycyl‐tRNA in interaction with elongation factor tu:GTP complex , 1975, FEBS letters.

[10]  K. Arai,et al.  Studies on the polypeptide elongation factors from E. coli. V. Properties of various complexes containing EF-Tu and EF-Ts. , 1974, Journal of biochemistry.

[11]  F. Schuber,et al.  On the Chemical Reactivity of aminoacyl-tRNA Ester Bond. I. Influence of pH and Nature of the Acyl Group on the Rate of Hydrolysis , 1974 .

[12]  L. Bosch,et al.  An Escherichia coli mutant with an altered elongation factor Tu. , 1974, Proceedings of the National Academy of Sciences of the United States of America.

[13]  J. Lucas-Lenard,et al.  Studies on the fluorescence of the Y base of yeast phenylalanine transfer ribonucleic acid. Effect of pH, aminoacylation, and interaction with elongation factor Tu. , 1973, Biochemistry.

[14]  C. Urbanke,et al.  The binding of ethidium bromide to different conformations of tRNA. Unfolding of tertiary structure. , 1973, European journal of biochemistry.

[15]  D. Riesner,et al.  Kinetic studies on the interaction of seryl‐tRNA synthetase with tRNASer and ser‐tRNAser from yeast , 1973, FEBS Letters.

[16]  D. Riesner,et al.  Thermodynamics and kinetics of the interaction of phenylalanine‐specific tRNA from yeast with its cognate synthetase as studied by the flourescence of the Y‐base , 1973, FEBS letters.

[17]  H. Weissbach,et al.  The interaction of guanosine 5'-diphosphate, 2' (3')-diphosphate with the bacterial elongation factor Tu. , 1973, Archives of biochemistry and biophysics.

[18]  J. Ballesta,et al.  Elongation factor T-dependent hydrolysis of guanosine triphosphate resistant to thiostrepton. , 1972, Proceedings of the National Academy of Sciences of the United States of America.

[19]  J. Ofengand,et al.  Interaction of fragmented and cross-linked Escherichia coli valine transfer ribonucleic acid with T u factor-guanosine triphosphate complex. , 1972, The Journal of biological chemistry.

[20]  D. Richter,et al.  Interaction of eukaryote initiator methionyl-tRNA with the eukaryote equivalent of bacterial elongation factor T and guanosine triphosphate. , 1971, Proceedings of the National Academy of Sciences of the United States of America.

[21]  H. Weissbach,et al.  The reactions of the sulfhydryl groups on the elongation factors Tu and Ts. , 1971, Archives of biochemistry and biophysics.

[22]  C. W. Gear,et al.  The automatic integration of ordinary differential equations , 1971, Commun. ACM.

[23]  D. Richter,et al.  Formation of a Ternary Complex between Formylatable Yeast Met-tRNA, GTP and Binding Factor T of Yeast and of E. coli , 1970, Nature.

[24]  J. Ofengand,et al.  Specificity of the interaction of aminoacyl ribonucleic acid with a protein-guanosine triphosphate complex from wheat embryo. , 1969, Biochemistry.

[25]  P. Lengyel,et al.  Peptide Chain Elongation: Discrimination against the Initiator Transfer RNA by Microbial Amino-acid Polymerization Factors , 1968, Nature.

[26]  H. Weissbach,et al.  Elongation factor Tu and the aminoacyl-tRNA-EFTu-GTP complex. , 1974, Methods in enzymology.

[27]  J. Ofengand Assay for AA-tRNA recognition by the EFTu-GTP complex of Escherichia coli. , 1974, Methods in enzymology.

[28]  D. Riesner,et al.  CHAPTER 15 – Thermodynamics and Kinetics of Conformational Transitions in Oligonucleotides and tRNA , 1973 .

[29]  P. Leder The elongation reactions in protein synthesis. , 1973, Advances in protein chemistry.

[30]  E. Stellwagen,et al.  Measurement of protein concentration with interferences optics. , 1969, Analytical biochemistry.

[31]  M. J. D. Powell,et al.  A Method for Minimizing a Sum of Squares of Non-Linear Functions Without Calculating Derivatives , 1965, Comput. J..