Anaerobic digestion: concepts, limits and perspectives.

Anaerobic degradation processes are faced with limitations with respect to reaction energetics and reaction kinetics. The small amount of energy available in methanogenic degradation of complex organic compounds allows in most cases only the conservation of minimum amounts of energy in the lowest range of energy exploitable by biochemical reactions for ATP-synthesis. This limit has to be defined in the range of 1/3-1/4 of an ATP unit, or 15-20 kJ per mol reaction. Such small amounts of energy are exploited efficiently by syntrophic microbial communities co-operating e.g. in fatty acid conversion to methane and CO2. Methanogens also set the stage for efficient conversion of sugars or amino acids, and channel electron fluxes to the utmost efficiency. Kinetic limitations are set by the inertness of certain compounds, e.g. hydrocarbons, to react in the absence of a strong oxidant. New reactions have been found recently which activate such compounds, e.g. aromatic hydrocarbons such as toluene, xylenes, naphthalene, methane, or ammonia. Refined techniques for analysis of microbial activities in ill defined natural environments such as digestive tracts of small invertebrates or polluted aquifers have shown an amazing capacity for anaerobic or oxygen-limited degradation processes that are still to be exploited. Thus, anaerobic digestion is still a matter of fast increasing knowledge, both on the side of basic research as well as on the side of application in treatment of soil, waste materials, or in understanding complex living communities.

[1]  J. G. Kuenen,et al.  Metabolic pathway of anaerobic ammonium oxidation on the basis of 15N studies in a fluidized bed reactor. , 1997, Microbiology.

[2]  B. Schink,et al.  Evidence of Two Oxidative Reaction Steps Initiating Anaerobic Degradation of Resorcinol (1,3-Dihydroxybenzene) by the Denitrifying Bacterium Azoarcus anaerobius , 1998, Journal of bacteriology.

[3]  Jochen A. Müller,et al.  Anaerobic Degradation of Phenolic Compounds , 2000, Naturwissenschaften.

[4]  B. Schink Energetics of syntrophic cooperation in methanogenic degradation , 1997, Microbiology and molecular biology reviews : MMBR.

[5]  S. Shima,et al.  Crystal structure of methyl-coenzyme M reductase: the key enzyme of biological methane formation. , 1997, Science.

[6]  R. Meckenstock,et al.  The use of a solid adsorber resin for enrichment of bacteria with toxic substrates and to identify metabolites: degradation of naphthalene, O-, and m-xylene by sulfate-reducing bacteria. , 2001, Journal of microbiological methods.

[7]  L. Young,et al.  Carboxylation as an Initial Reaction in the Anaerobic Metabolism of Naphthalene and Phenanthrene by Sulfidogenic Consortia , 1999, Applied and Environmental Microbiology.

[8]  L. Young,et al.  Initial Reactions in Anaerobic Alkane Degradation by a Sulfate Reducer, Strain AK-01 , 1999, Applied and Environmental Microbiology.

[9]  H. Cypionka,et al.  Life at the oxic-anoxic interface: microbial activities and adaptations. , 2000, FEMS microbiology reviews.

[10]  A. Zehnder,et al.  Methane formation and methane oxidation by methanogenic bacteria , 1979, Journal of bacteriology.

[11]  R. Thauer,et al.  Energy conservation in chemotrophic anaerobic bacteria , 1977, Bacteriological reviews.

[12]  Olaf Pfannkuche,et al.  A marine microbial consortium apparently mediating anaerobic oxidation of methane , 2000, Nature.

[13]  A G Leslie,et al.  Molecular architecture of the rotary motor in ATP synthase. , 1999, Science.

[14]  B. Schink,et al.  Energetics and biochemistry of fermentative benzoate degradation by Syntrophus gentianae , 1999, Archives of Microbiology.

[15]  B. Schink,et al.  Membrane-bound proton-translocating pyrophosphatase of Syntrophus gentianae, a syntrophically benzoate-degrading fermenting bacterium. , 1998, European journal of biochemistry.

[16]  F. Widdel,et al.  Anaerobic Initial Reaction of n-Alkanes in a Denitrifying Bacterium: Evidence for (1-Methylpentyl)succinate as Initial Product and for Involvement of an Organic Radical in n-Hexane Metabolism , 2001, Journal of bacteriology.

[17]  J. Heider,et al.  Anaerobic metabolism of aromatic compounds. , 1997, European journal of biochemistry.

[18]  P. Dimroth,et al.  Operation of the F(0) motor of the ATP synthase. , 2000, Biochimica et biophysica acta.

[19]  D. Lovley,et al.  Benzene oxidation coupled to sulfate reduction , 1995, Applied and environmental microbiology.

[20]  F. Widdel,et al.  Anaerobic degradation of naphthalene by a pure culture of a novel type of marine sulphate-reducing bacterium. , 1999, Environmental microbiology.

[21]  M. Nanny,et al.  Metabolism of Benzoate, Cyclohex-1-ene Carboxylate, and Cyclohexane Carboxylate by “Syntrophus aciditrophicus” Strain SB in Syntrophic Association with H2-Using Microorganisms , 2001, Applied and Environmental Microbiology.

[22]  R. Meckenstock,et al.  13C/12C isotope fractionation of aromatic hydrocarbons during microbial degradation. , 1999, Environmental microbiology.

[23]  G. Burchhardt,et al.  Anaerobic metabolism of aromatic compounds via the benzoyl‐CoA pathway , 1998 .

[24]  G. Fuchs,et al.  Benzoyl-CoA reductase (dearomatizing), a key enzyme of anaerobic aromatic metabolism. A study of adenosinetriphosphatase activity, ATP stoichiometry of the reaction and EPR properties of the enzyme. , 1997, European journal of biochemistry.

[25]  Tori M. Hoehler,et al.  Field and laboratory studies of methane oxidation in an anoxic marine sediment: Evidence for a methanogen‐sulfate reducer consortium , 1994 .

[26]  F. Widdel,et al.  Anaerobic bacterial metabolism of hydrocarbons , 1998 .