Three‐dimensional water diffusion in impermeable cylindrical tubes: theory versus experiments

Characterizing diffusion of gases and liquids within pores is important in understanding numerous transport processes and affects a wide range of practical applications. Previous measurements of the pulsed gradient stimulated echo (PGSTE) signal attenuation, E(q), of water within nerves and impermeable cylindrical microcapillary tubes showed it to be exquisitely sensitive to the orientation of the applied wave vector, q, with respect to the tube axis in the high‐q regime. Here, we provide a simple three‐dimensional model to explain this angular dependence by decomposing the average propagator, which describes the net displacement of water molecules, into components parallel and perpendicular to the tube wall, in which axial diffusion is free and radial diffusion is restricted. The model faithfully predicts the experimental data, not only the observed diffraction peaks in E(q) when the diffusion gradients are approximately normal to the tube wall, but their sudden disappearance when the gradient orientation possesses a small axial component. The model also successfully predicts the dependence of E(q) on gradient pulse duration and on gradient strength as well as tube inner diameter. To account for the deviation from the narrow pulse approximation in the PGSTE sequence, we use Callaghan's matrix operator framework, which this study validates experimentally for the first time. We also show how to combine average propagators derived for classical one‐dimensional and two‐dimensional models of restricted diffusion (e.g. between plates, within cylinders) to construct composite three‐dimensional models of diffusion in complex media containing pores (e.g. rectangular prisms and/or capped cylinders) having a distribution of orientations, sizes, and aspect ratios. This three‐dimensional modeling framework should aid in describing diffusion in numerous biological systems and in a myriad of materials sciences applications. Copyright © 2008 John Wiley & Sons, Ltd.

[1]  Jörg Kärger,et al.  The propagator representation of molecular transport in microporous crystallites , 1983 .

[2]  P. Callaghan,et al.  PGSE NMR and Molecular Translational Motion in Porous Media , 1994 .

[3]  P. Basser,et al.  New modeling and experimental framework to characterize hindered and restricted water diffusion in brain white matter , 2004, Magnetic resonance in medicine.

[4]  Callaghan,et al.  Spin Echo Analysis of Restricted Diffusion under Generalized Gradient Waveforms: Planar, Cylindrical, and Spherical Pores with Wall Relaxivity. , 1999, Journal of magnetic resonance.

[5]  B. D. Boss,et al.  Anisotropic Diffusion in Hydrated Vermiculite , 1965 .

[6]  J. E. Tanner Use of the Stimulated Echo in NMR Diffusion Studies , 1970 .

[7]  D. Gadian,et al.  q‐Space imaging of the brain , 1994, Magnetic resonance in medicine.

[8]  S. Patz,et al.  Probing porous media with gas diffusion NMR. , 1999, Physical review letters.

[9]  Schwartz,et al.  Diffusion propagator as a probe of the structure of porous media. , 1992, Physical review letters.

[10]  E. Stejskal Use of Spin Echoes in a Pulsed Magnetic‐Field Gradient to Study Anisotropic, Restricted Diffusion and Flow , 1965 .

[11]  P. Basser,et al.  Axcaliber: A method for measuring axon diameter distribution from diffusion MRI , 2008, Magnetic resonance in medicine.

[12]  P. Callaghan,et al.  RAPID COMMUNICATION: NMR microscopy of dynamic displacements: k-space and q-space imaging , 1988 .

[13]  J. E. Tanner,et al.  Self diffusion of water in frog muscle. , 1979, Biophysical journal.

[14]  Sen,et al.  Effects of microgeometry and surface relaxation on NMR pulsed-field-gradient experiments: Simple pore geometries. , 1992, Physical review. B, Condensed matter.

[15]  P W Kuchel,et al.  NMR “diffusion‐diffraction” of water revealing alignment of erythrocytes in a magnetic field and their dimensions and membrane transport characteristics , 1997, Magnetic resonance in medicine.

[16]  E. Purcell,et al.  Effects of Diffusion on Free Precession in Nuclear Magnetic Resonance Experiments , 1954 .

[17]  Y. Cohen,et al.  Displacement imaging of spinal cord using q‐space diffusion‐weighted MRI , 2000, Magnetic resonance in medicine.

[18]  Baldwin Robertson,et al.  Spin-Echo Decay of Spins Diffusing in a Bounded Region , 1966 .

[19]  K. Brownstein,et al.  Importance of classical diffusion in NMR studies of water in biological cells , 1979 .

[20]  Yaniv Assaf,et al.  Improved detectability of experimental allergic encephalomyelitis in excised swine spinal cords by high b-value q-space DWI , 2005, Experimental Neurology.

[21]  P. Nico,et al.  Dimensional Study of Capillary Tubing Used for Gas Chromatography , 2004 .

[22]  P. Basser,et al.  In vivo fiber tractography using DT‐MRI data , 2000, Magnetic resonance in medicine.

[23]  Yoram Cohen,et al.  Effect of experimental parameters on high b‐value q‐space MR images of excised rat spinal cord , 2005, Magnetic resonance in medicine.

[24]  John Crank,et al.  The Mathematics Of Diffusion , 1956 .

[25]  Jeffrey A. Hubbell,et al.  Biomaterials in Tissue Engineering , 1995, Bio/Technology.

[26]  Paul T. Callaghan,et al.  Pulsed-Gradient Spin-Echo NMR for Planar, Cylindrical, and Spherical Pores under Conditions of Wall Relaxation , 1995 .

[27]  P. Nico,et al.  Internal diameter measurement of small bore capillary tubing , 2003 .

[28]  D. Cory,et al.  Measurement of translational displacement probabilities by NMR: An indicator of compartmentation , 1990, Magnetic resonance in medicine.

[29]  P. Callaghan Principles of Nuclear Magnetic Resonance Microscopy , 1991 .

[30]  H. Pfeifer Principles of Nuclear Magnetic Resonance Microscopy , 1992 .

[31]  P. Mitra,et al.  Probing the structure of porous media using NMR spin echoes. , 1994, Magnetic resonance imaging.

[32]  Y. Cohen,et al.  High b‐value q‐space analyzed diffusion‐weighted MRS and MRI in neuronal tissues – a technical review , 2002, NMR in biomedicine.

[33]  J. C. Jaeger,et al.  Conduction of Heat in Solids , 1952 .

[34]  Carlo Pierpaoli,et al.  Fiber-Tractography in Human Brain Using Diffusion Tensor MRI (DT-MRI) , 2000 .

[35]  P. Callaghan,et al.  Segmental motion of entangled random coil polymers studied by pulsed gradient spin echo nuclear magnetic resonance , 1998 .

[36]  P. Callaghan,et al.  Diffraction-like effects in NMR diffusion studies of fluids in porous solids , 1991, Nature.

[37]  T. Hendler,et al.  High b‐value q‐space analyzed diffusion‐weighted MRI: Application to multiple sclerosis , 2002, Magnetic resonance in medicine.

[38]  Jörg Kärger,et al.  Principles and Application of Self-Diffusion Measurements by Nuclear Magnetic Resonance , 1988 .

[39]  P. Basser,et al.  MR diffusion tensor spectroscopy and imaging. , 1994, Biophysical journal.

[40]  P. Basser,et al.  Finer Discrimination of Fiber Orientation at High q Diffusion MR: Theoretical and Experimental Confirmation , 2005 .

[41]  Mark E. Davis Ordered Porous Materials for Emerging Applications , 2002 .

[42]  D. van Dusschoten,et al.  Flow and transport studies in (non)consolidated porous (bio)systems consisting of solid or porous beads by PFG NMR. , 1998, Magnetic resonance imaging.

[43]  Peter J Basser,et al.  MR diffusion - "diffraction" phenomenon in multi-pulse-field-gradient experiments. , 2007, Journal of magnetic resonance.

[44]  B. Hills,et al.  Dynamic q space microscopy of cellular tissue , 1992 .

[45]  Yaniv Assaf,et al.  Composite hindered and restricted model of diffusion (CHARMED) MR imaging of the human brain , 2005, NeuroImage.

[46]  D G Gadian,et al.  Localized q‐space imaging of the mouse brain , 1997, Magnetic resonance in medicine.

[47]  Callaghan,et al.  A simple matrix formalism for spin echo analysis of restricted diffusion under generalized gradient waveforms , 1997, Journal of magnetic resonance.

[48]  P. V. van Zijl,et al.  Evaluation of restricted diffusion in cylinders. Phosphocreatine in rabbit leg muscle. , 1994, Journal of magnetic resonance. Series B.

[49]  Carlo Pierpaoli,et al.  Dependence on diffusion time of apparent diffusion tensor of ex vivo calf tongue and heart , 2005, Magnetic resonance in medicine.

[50]  P. Gennes Scaling Concepts in Polymer Physics , 1979 .

[51]  R. Kimmich,et al.  NMR field-cycling relaxation spectroscopy, transverse NMR relaxation, self-diffusion and zero-shear viscosity: Defect diffusion and reptation in non-glassy amorphous polymers , 1982 .

[52]  G. Topulos,et al.  3He lung imaging in an open access, very‐low‐field human magnetic resonance imaging system , 2005, Magnetic resonance in medicine.

[53]  K. J. Packer,et al.  Pulsed NMR studies of restricted diffusion. I. Droplet size distributions in emulsions , 1972 .

[54]  C. H. Neuman Spin echo of spins diffusing in a bounded medium , 1974 .

[55]  J. E. Tanner,et al.  Restricted Self‐Diffusion of Protons in Colloidal Systems by the Pulsed‐Gradient, Spin‐Echo Method , 1968 .

[56]  Bengt Jönsson,et al.  Restricted Diffusion in Cylindrical Geometry , 1995 .

[57]  Eiichi Fukushima,et al.  A Multiple-Narrow-Pulse Approximation for Restricted Diffusion in a Time-Varying Field Gradient , 1996 .

[58]  P. Callaghan,et al.  Generalized Analysis of Motion Using Magnetic Field Gradients , 1996 .

[59]  J. E. Tanner,et al.  Spin diffusion measurements : spin echoes in the presence of a time-dependent field gradient , 1965 .

[60]  P. Callaghan Susceptibility-limited resolution in nuclear magnetic resonance microscopy , 1990 .

[61]  Ferenc A. Jolesz,et al.  Water diffusion, T2, and compartmentation in frog sciatic nerve , 1999 .

[62]  Yaniv Assaf,et al.  The effect of rotational angle and experimental parameters on the diffraction patterns and micro-structural information obtained from q-space diffusion NMR: implication for diffusion in white matter fibers. , 2004, Journal of magnetic resonance.

[63]  P. Basser,et al.  Diffusion tensor MR imaging of the human brain. , 1996, Radiology.

[64]  D G Cory,et al.  Water diffusion, T(2), and compartmentation in frog sciatic nerve. , 1999, Magnetic resonance in medicine.