A perspective of synthetic biology: Assembling building blocks for novel functions
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[1] Satoru Miyano,et al. Estimation of Genetic Networks and Functional Structures Between Genes by Using Bayesian Networks and Nonparametric Regression , 2001, Pacific Symposium on Biocomputing.
[2] Carlo D. Montemagno,et al. Nanomachines: A Roadmap for Realizing the Vision , 2001 .
[3] Martin Rosenberg,et al. Identification of Critical Staphylococcal Genes Using Conditional Phenotypes Generated by Antisense RNA , 2001, Science.
[4] Kazuhiko Kinosita,et al. F1-ATPase Is a Highly Efficient Molecular Motor that Rotates with Discrete 120° Steps , 1998, Cell.
[5] M. Elowitz,et al. Modeling a synthetic multicellular clock: repressilators coupled by quorum sensing. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[6] D. Wolf,et al. On the relationship between genomic regulatory element organization and gene regulatory dynamics. , 1998, Journal of theoretical biology.
[7] D. Bray. Molecular Networks: The Top-Down View , 2003, Science.
[8] A. C. Chang,et al. Construction of biologically functional bacterial plasmids in vitro. , 1973, Proceedings of the National Academy of Sciences of the United States of America.
[9] Ron Weiss,et al. Genetic circuit building blocks for cellular computation, communications, and signal processing , 2003, Natural Computing.
[10] Michael L Simpson,et al. Rewiring the cell: synthetic biology moves towards higher functional complexity. , 2004, Trends in biotechnology.
[11] Savageau Ma. Rules for the evolution of gene circuitry. , 1998 .
[12] P. Boyer. The ATP synthase--a splendid molecular machine. , 1997, Annual review of biochemistry.
[13] R. Milo,et al. Network motifs in integrated cellular networks of transcription-regulation and protein-protein interaction. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[14] J. Collins,et al. Programmable cells: interfacing natural and engineered gene networks. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[15] Jan Pieter Abrahams,et al. Structure at 2.8 Â resolution of F1-ATPase from bovine heart mitochondria , 1994, Nature.
[16] S. Block. Real engines of creation , 1997, Nature.
[17] Kazuhiko Kinosita,et al. Direct observation of the rotation of F1-ATPase , 1997, Nature.
[18] M. Sisido,et al. Five-base codons for incorporation of nonnatural amino acids into proteins. , 2001, Nucleic acids research.
[19] Ron Weiss,et al. Evolutionary Design of Genetic Circuits and Cell-Cell Communications , 2003, Adv. Complex Syst..
[20] H. Kitano. Systems Biology: A Brief Overview , 2002, Science.
[21] N. Packard,et al. Transitions from Nonliving to Living Matter , 2004, Science.
[22] H. McAdams,et al. Gene regulation: Towards a circuit engineering discipline , 2000, Current Biology.
[23] Viola Vogel,et al. Molecular shuttles: directed motion of microtubules along nanoscale kinesin tracks , 1999 .
[24] Michael P. Sheetz,et al. Identification of a novel force-generating protein, kinesin, involved in microtubule-based motility , 1985, Cell.
[25] B. Bassler,et al. Quorum sensing in bacteria. , 2001, Annual review of microbiology.
[26] Hidde de Jong,et al. Qualitative Simulation of Large and Complex Genetic Regulation Systems , 2000, ECAI.
[27] P. Karp,et al. Computational prediction of human metabolic pathways from the complete human genome , 2004, Genome Biology.
[28] Andrew B. Martin,et al. Generation of a bacterium with a 21 amino acid genetic code. , 2003, Journal of the American Chemical Society.
[29] C. J. Noren,et al. In vitro suppression of an amber mutation by a chemically aminoacylated transfer RNA prepared by runoff transcription , 1990, Nucleic Acids Res..
[30] P. Schultz,et al. The use of 5'-phospho-2 deoxyribocytidylylriboadenosine as a facile route to chemical aminoacylation of tRNA. , 1989, Nucleic acids research.
[31] H. Craighead,et al. Powering an inorganic nanodevice with a biomolecular motor. , 2000, Science.
[32] Pier Luigi Luisi,et al. The Notion of a DNA Minimal Cell: A General Discourse and Some Guidelines for an Experimental Approach , 2002 .
[33] H. Westerhoff,et al. Building the cellular puzzle: control in multi-level reaction networks. , 2001, Journal of theoretical biology.
[34] Roger Brent,et al. A partnership between biology and engineering , 2004, Nature Biotechnology.
[35] U. Alon,et al. Negative autoregulation speeds the response times of transcription networks. , 2002, Journal of molecular biology.
[36] J. Collins,et al. Construction of a genetic toggle switch in Escherichia coli , 2000, Nature.
[37] M. Wall,et al. Design of gene circuits: lessons from bacteria , 2004, Nature Reviews Genetics.
[38] P. Brazhnik,et al. Gene networks: how to put the function in genomics. , 2002, Trends in biotechnology.
[39] J Craig Venter,et al. Generating a synthetic genome by whole genome assembly: φX174 bacteriophage from synthetic oligonucleotides , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[40] P. Swain,et al. Stochastic Gene Expression in a Single Cell , 2002, Science.
[41] Satoru Miyano,et al. Identification of Genetic Networks from a Small Number of Gene Expression Patterns Under the Boolean Network Model , 1998, Pacific Symposium on Biocomputing.
[42] S. Basu,et al. Spatiotemporal control of gene expression with pulse-generating networks. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[43] U. Alon. Biological Networks: The Tinkerer as an Engineer , 2003, Science.
[44] M. Elowitz,et al. A synthetic oscillatory network of transcriptional regulators , 2000, Nature.
[45] Joel L Cuello. The descent of Biological Engineering , 2006 .
[46] Roland Stracke,et al. Motor protein-driven unidirectional transport of micrometer-sized cargoes across isopolar microtubule arrays , 2001 .
[47] Jeffrey M. Perkel. Investigating molecular motors step by step , 2004 .
[48] Hong-Yu Ou,et al. EG: a database of essential genes , 2004, Nucleic Acids Res..
[49] John Sullins. Synthetic Biology: The Technoscience of Artificial Life , 1998 .
[50] J. Monod,et al. Genetic regulatory mechanisms in the synthesis of proteins. , 1961, Journal of molecular biology.
[51] E V Koonin,et al. How many genes can make a cell: the minimal-gene-set concept. , 2000, Annual review of genomics and human genetics.
[52] Christopher A. Voigt,et al. Synthetic biology: Engineering Escherichia coli to see light , 2005, Nature.
[53] Norbert Wiener,et al. Cybernetics: Control and Communication in the Animal and the Machine. , 1949 .
[54] Jacob J. Schmidt,et al. Engineering Issues in the Fabrication of a Hybrid Nano-Propeller System Powered by F1-ATPase , 2001 .
[55] Nicola J. Rinaldi,et al. Computational discovery of gene modules and regulatory networks , 2003, Nature Biotechnology.
[56] Michael P. Sheetz,et al. A model for kinesin movement from nanometer-level movements of kinesin and cytoplasmic dynein and force measurements , 1991, Journal of Cell Science.
[57] A. Paul,et al. Chemical Synthesis of Poliovirus cDNA: Generation of Infectious Virus in the Absence of Natural Template , 2002, Science.
[58] A. Ninfa,et al. Development of Genetic Circuitry Exhibiting Toggle Switch or Oscillatory Behavior in Escherichia coli , 2003, Cell.
[59] A. Rinaldi. A new code for life , 2004, EMBO reports.
[60] Arthur L. Caplan,et al. Policy forum: genetics. Ethical considerations in synthesizing a minimal genome. , 1999, Science.
[61] M. Sisido,et al. Incorporation of nonnatural amino acids into proteins by using various four-base codons in an Escherichia coli in vitro translation system. , 2001, Biochemistry.
[62] D. Deamer,et al. A giant step towards artificial life? , 2005, Trends in biotechnology.
[63] Brian O. Bachmann,et al. A genomics-guided approach for discovering and expressing cryptic metabolic pathways , 2003, Nature Biotechnology.
[64] S Fuhrman,et al. Reveal, a general reverse engineering algorithm for inference of genetic network architectures. , 1998, Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing.
[65] P. Schultz,et al. Expanding the Genetic Code , 2003, Science.
[66] Peter G Schultz,et al. An Expanded Eukaryotic Genetic Code , 2003, Science.
[67] P. Swain,et al. Intrinsic and extrinsic contributions to stochasticity in gene expression , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[68] J. Howard,et al. Inhibition of kinesin motility by ADP and phosphate supports a hand-over-hand mechanism. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[69] Manuel Peitsch,et al. A genome-based approach for the identification of essential bacterial genes , 1998, Nature Biotechnology.
[70] S. Ehrlich,et al. Essential Bacillus subtilis genes , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[71] J. Collins,et al. Inferring Genetic Networks and Identifying Compound Mode of Action via Expression Profiling , 2003, Science.
[72] P. Schultz,et al. Addition of the keto functional group to the genetic code of Escherichia coli , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[73] E. Koonin,et al. A minimal gene set for cellular life derived by comparison of complete bacterial genomes. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[74] Steven E. Brenner,et al. Computational Structural Genomics of a Complete Minimal Organism , 2002 .
[75] Loren L Looger,et al. Control of a biomolecular motor-powered nanodevice with an engineered chemical switch , 2002, Nature materials.
[76] O. White,et al. Global transposon mutagenesis and a minimal Mycoplasma genome. , 1999, Science.
[77] V. V. Bulygin,et al. Rotation of subunits during catalysis by Escherichia coli F1-ATPase. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[78] Eric H Davidson,et al. A provisional regulatory gene network for specification of endomesoderm in the sea urchin embryo. , 2002, Developmental biology.
[79] Bartholomew Canton,et al. Engineering the Interface Between Cellular Chassis and Integrated Biological Systems , 2005 .
[80] M Wahde,et al. Coarse-grained reverse engineering of genetic regulatory networks. , 2000, Bio Systems.
[81] Mads Kaern,et al. The engineering of gene regulatory networks. , 2003, Annual review of biomedical engineering.
[82] B O Palsson,et al. Metabolic modeling of microbial strains in silico. , 2001, Trends in biochemical sciences.