Activation of the leu-500 Promoter by a Reversed Polarity tetA Gene

The leu-500 promoter is inactivated by a mutation in the −10 region but can be activated in topA Escherichia coli and Salmonella strains. We have found that the tetA gene plays a vital role in thetopA-dependent activation of a plasmid-borneleu-500 promoter. In previous studies, theleu-500 promoter and tetA gene have been arranged divergently. In this study we have reversed the polarity of the tetA gene, thus locating the leu-500promoter at the 3′ end of tetA. Despite being formally located in the downstream region of tetA, theleu-500 promoter is equally well activated in atopA strain in this environment, even though it is 1.6 kilobase pairs away from the promoter of the reversed tetAgene. Activation of the leu-500 promoter depends on transcription and translation of tetA but is largely insensitive to the function of other transcription units on the plasmid. These results require a change in viewpoint of the role oftetA, from local to global supercoiling. We conclude that transcription of the tetA gene is the main generator of transcription-induced supercoiling that activates theleu-500 promoter. Unbalanced relaxation of this supercoiling leads to a net increase in the negative linking difference of the plasmid globally, and there is a linear correlation between the change in global plasmid topology and the activation of theleu-500 promoter. Thus the leu-500 promoter appears to respond to the negative supercoiling of the plasmid overall.

[1]  D. Sherratt,et al.  Trans-complementable copy-number mutants of plasmid ColE1 , 1980, Nature.

[2]  K. Drlica,et al.  DNA supercoiling and suppression of the leu-500 promoter mutation , 1985, Journal of bacteriology.

[3]  J. Wang,et al.  Anchoring of DNA to the bacterial cytoplasmic membrane through cotranscriptional synthesis of polypeptides encoding membrane proteins or proteins for export: a mechanism of plasmid hypernegative supercoiling in mutants deficient in DNA topoisomerase I , 1993, Journal of bacteriology.

[4]  K. Drlica,et al.  Topoisomerase I mutants: the gene on pBR322 that encodes resistance to tetracycline affects plasmid DNA supercoiling. , 1986, Proceedings of the National Academy of Sciences of the United States of America.

[5]  J. Lodge,et al.  Formation of supercoiling domains in plasmid pBR322 , 1989, Journal of bacteriology.

[6]  F. Mukai,et al.  ANALYSIS OF UNLINKED SUPPRESSORS OF AN O degrees MUTATION IN SALMONELLA. , 1963, Proceedings of the National Academy of Sciences of the United States of America.

[7]  D. Lilley,et al.  Elevated unconstrained supercoiling of plasmid DNA generated by transcription and translation of the tetracycline resistance gene in eubacteria. , 1994, Biochemistry.

[8]  D. Lilley,et al.  Activation of the leu-500 promoter: a topological domain generated by divergent transcription in a plasmid. , 1993, Biochemistry.

[9]  J. Hearst,et al.  Efficient anchoring of RNA polymerase in Escherichia coli during coupled transcription-translation of genes encoding integral inner membrane polypeptides. , 1994, The Journal of biological chemistry.

[10]  K. Drlica,et al.  Escherichia coli DNA topoisomerase I mutants: Increased supercoiling is corrected by mutations near gyrase genes , 1982, Cell.

[11]  J. Wang,et al.  The Escherichia coli supX locus is topA, the structural gene for DNA topoisomerase I. , 1985, Proceedings of the National Academy of Sciences of the United States of America.

[12]  Gerald R. Smith DNA supercoiling: Another level for regulating gene expression , 1981, Cell.

[13]  R. Sternglanz,et al.  Escherichia coli DNA topoisomerase I mutants have compensatory mutations in DNA gyrase genes , 1982, Cell.

[14]  D. Lilley,et al.  Activity of a plasmid-borne leu-500 promoter depends on the transcription and translation of an adjacent gene. , 1992, Proceedings of the National Academy of Sciences of the United States of America.

[15]  L. Bossi,et al.  Long-distance effect of downstream transcription on activity of the supercoiling-sensitive leu-500 promoter in a topA mutant of Salmonella typhimurium , 1996, Journal of bacteriology.

[16]  D. Lilley,et al.  Topological promoter coupling in Escherichia coli: delta topA-dependent activation of the leu-500 promoter on a plasmid , 1994, Journal of bacteriology.

[17]  L. Hsu,et al.  Nonchromosomal antibiotic resistance in bacteria: genetic transformation of Escherichia coli by R-factor DNA. , 1972, Proceedings of the National Academy of Sciences of the United States of America.

[18]  D. Lilley,et al.  The genetic control of DNA supercoiling in Salmonella typhimurium. , 1984, The EMBO journal.

[19]  L. Shu,et al.  Activation of the leu-500 promoter by adjacent transcription , 1994, Journal of bacteriology.

[20]  J. Calvo,et al.  Promoter mutation causing catabolite repression of the Salmonella typhimurium leucine operon , 1984, Journal of bacteriology.

[21]  J. Wang,et al.  Supercoiling of the DNA template during transcription. , 1987, Proceedings of the National Academy of Sciences of the United States of America.

[22]  D. Lockshon,et al.  Positively supercoiled plasmid DNA is produced by treatment of Escherichia coli with DNA gyrase inhibitors. , 1983, Nucleic acids research.

[23]  D. Lilley,et al.  Local DNA topology and gene expression: the case of the leu‐500 promoter , 1991, Molecular microbiology.

[24]  J. Wang,et al.  Identification of barriers to rotation of DNA segments in yeast from the topology of DNA rings excised by an inducible site-specific recombinase. , 1993, Proceedings of the National Academy of Sciences of the United States of America.

[25]  D. Lilley,et al.  DNA supercoiling and the leu‐500 promoter mutation of Salmonella typhimurium. , 1988, The EMBO journal.

[26]  F. Sanger,et al.  DNA sequencing with chain-terminating inhibitors. , 1977, Proceedings of the National Academy of Sciences of the United States of America.

[27]  D. Lilley,et al.  Superhelical torsion in cellular DNA responds directly to environmental and genetic factors. , 1990, Proceedings of the National Academy of Sciences of the United States of America.

[28]  C. Higgins,et al.  Localized domains of DNA supercoiling: topological coupling between promoters , 1996, Molecular microbiology.