Distinct Roles of N-Terminal Fatty Acid Acylation of the Salinity-Sensor Protein SOS3

The Salt-Overly-Sensitive (SOS) pathway controls the net uptake of sodium by roots and the xylematic transfer to shoots in vascular plants. SOS3/CBL4 is a core component of the SOS pathway that senses calcium signaling of salinity stress to activate and recruit the protein kinase SOS2/CIPK24 to the plasma membrane to trigger sodium efflux by the Na/H exchanger SOS1/NHX7. However, despite the well-established function of SOS3 at the plasma membrane, SOS3 displays a nucleo-cytoplasmic distribution whose physiological meaning is not understood. Here, we show that the N-terminal part of SOS3 encodes structural information for dual acylation with myristic and palmitic fatty acids, each of which commands a different location and function of SOS3. N-myristoylation at glycine-2 is essential for plasma membrane association and recruiting SOS2 to activate SOS1, whereas S-acylation at cysteine-3 redirects SOS3 toward the nucleus. Moreover, a poly-lysine track in positions 7–11 that is unique to SOS3 among other Arabidopsis CBLs appears to be essential for the correct positioning of the SOS2-SOS3 complex at the plasma membrane for the activation of SOS1. The nuclear-localized SOS3 protein had limited bearing on the salt tolerance of Arabidopsis. These results are evidence of a novel S-acylation dependent nuclear trafficking mechanism that contrasts with alternative subcellular targeting of other CBLs by S-acylation.

[1]  Woe-Yeon Kim,et al.  A Calcium/Palmitoylation Switch Interfaces the Signaling Networks of Stress Response and Transition to Flowering , 2021 .

[2]  Piers A. Hemsley S-acylation in plants: an expanding field. , 2020, Biochemical Society transactions.

[3]  Sha Li,et al.  S-acylation of CBL10/SCaBP8 by PAT10 is crucial for its tonoplast association and function in salt tolerance. , 2020, Journal of integrative plant biology.

[4]  D. Yun,et al.  A Critical Role of Sodium Flux via the Plasma Membrane Na+/H+ Exchanger SOS1 in the Salt Tolerance of Rice1[OPEN] , 2019, Plant Physiology.

[5]  Paul M. Jenkins,et al.  Spatial organization of palmitoyl acyl transferases governs substrate localization and function , 2019, Molecular membrane biology.

[6]  J. Kudla,et al.  Modulation of ABA responses by the protein kinase WNK8 , 2018, FEBS letters.

[7]  J. Kudla,et al.  The battle of two ions: Ca2+ signalling against Na+ stress. , 2019, Plant biology.

[8]  Wei Zhang,et al.  A Tonoplast-Associated Calcium-Signaling Module Dampens ABA Signaling during Stomatal Movement1 , 2018, Plant Physiology.

[9]  J. Steyaert,et al.  Structural and genomic decoding of human and plant myristoylomes reveals a definitive recognition pattern , 2018, Nature Chemical Biology.

[10]  Sha Li,et al.  The ADAPTOR PROTEIN-3 Complex Mediates Pollen Tube Growth by Coordinating Vacuolar Targeting and Organization1[OPEN] , 2018, Plant Physiology.

[11]  Piers A. Hemsley,et al.  Fats and function: protein lipid modifications in plant cell signalling. , 2017, Current opinion in plant biology.

[12]  J. Kudla,et al.  N‐terminal S‐acylation facilitates tonoplast targeting of the calcium sensor CBL6 , 2017, FEBS letters.

[13]  B. Qi,et al.  Progress toward Understanding Protein S-acylation: Prospective in Plants , 2017, Front. Plant Sci..

[14]  U. Ludewig,et al.  The Kinase CIPK23 Inhibits Ammonium Transport in Arabidopsis thaliana , 2017, Plant Cell.

[15]  S. Fujita,et al.  Polarly localized kinase SGN1 is required for Casparian strip integrity and positioning , 2016, Nature Plants.

[16]  M. Kumar,et al.  S-Acylation of the cellulose synthase complex is essential for its plasma membrane localization , 2016, Science.

[17]  M. Resh,et al.  Fatty acylation of proteins: The long and the short of it. , 2016, Progress in lipid research.

[18]  Paula Ragel,et al.  The CBL-Interacting Protein Kinase CIPK23 Regulates HAK5-Mediated High-Affinity K+ Uptake in Arabidopsis Roots1[OPEN] , 2015, Plant Physiology.

[19]  Amita Pandey,et al.  Calcineurin B-Like Protein-Interacting Protein Kinase CIPK21 Regulates Osmotic and Salt Stress Responses in Arabidopsis1 , 2015, Plant Physiology.

[20]  Leonie Steinhorst,et al.  Vacuolar CBL-CIPK12 Ca2+-Sensor-Kinase Complexes Are Required for Polarized Pollen Tube Growth , 2015, Current Biology.

[21]  S. Luan,et al.  Tonoplast CBL–CIPK calcium signaling network regulates magnesium homeostasis in Arabidopsis , 2015, Proceedings of the National Academy of Sciences.

[22]  J. Kudla,et al.  Site- and kinase-specific phosphorylation-mediated activation of SLAC1, a guard cell anion channel stimulated by abscisic acid , 2014, Science Signaling.

[23]  J. Kudla,et al.  The vacuolar calcium sensors CBL2 and CBL3 affect seed size and embryonic development in Arabidopsis thaliana. , 2014, The Plant journal : for cell and molecular biology.

[24]  Kenji Hashimoto,et al.  The Calcineurin B-like calcium sensors CBL1 and CBL9 together with their interacting protein kinase CIPK26 regulate the Arabidopsis NADPH oxidase RBOHF. , 2013, Molecular plant.

[25]  R. Bressan,et al.  The Salt Overly Sensitive (SOS) pathway: established and emerging roles. , 2013, Molecular plant.

[26]  Liwen Jiang,et al.  PROTEIN S-ACYL TRANSFERASE10 Is Critical for Development and Salt Tolerance in Arabidopsis[W] , 2013, Plant Cell.

[27]  K. Lilley,et al.  A proteomic approach identifies many novel palmitoylated proteins in Arabidopsis. , 2013, The New phytologist.

[28]  S. Luan,et al.  Tonoplast calcium sensors CBL2 and CBL3 control plant growth and ion homeostasis through regulating V-ATPase activity in Arabidopsis , 2012, Cell Research.

[29]  Oliver Batistič,et al.  Genomics and Localization of the Arabidopsis DHHC-Cysteine-Rich Domain S-Acyltransferase Protein Family1[C][W] , 2012, Plant Physiology.

[30]  V. Babich,et al.  Calcineurin homologous protein: a multifunctional Ca2+-binding protein family. , 2012, American journal of physiology. Renal physiology.

[31]  Leonie Steinhorst,et al.  S-acylation-dependent association of the calcium sensor CBL2 with the vacuolar membrane is essential for proper abscisic acid responses , 2012, Cell Research.

[32]  J. Fernández,et al.  Ion Exchangers NHX1 and NHX2 Mediate Active Potassium Uptake into Vacuoles to Regulate Cell Turgor and Stomatal Function in Arabidopsis[W][OA] , 2012, Plant Cell.

[33]  J. Kudla,et al.  FRET-based genetically encoded sensors allow high-resolution live cell imaging of Ca²⁺ dynamics. , 2012, The Plant journal : for cell and molecular biology.

[34]  I. Rodrı́guez-Crespo,et al.  Protein palmitoylation and subcellular trafficking. , 2011, Biochimica et biophysica acta.

[35]  J. Kudla,et al.  Calcium-dependent modulation and plasma membrane targeting of the AKT2 potassium channel by the CBL4/CIPK6 calcium sensor/protein kinase complex , 2011, Cell Research.

[36]  Jian-Kang Zhu,et al.  Activation of the plasma membrane Na/H antiporter Salt-Overly-Sensitive 1 (SOS1) by phosphorylation of an auto-inhibitory C-terminal domain , 2011, Proceedings of the National Academy of Sciences.

[37]  J. Kudla,et al.  A ubiquitin-10 promoter-based vector set for fluorescent protein tagging facilitates temporal stability and native protein distribution in transient and stable expression studies. , 2010, The Plant journal : for cell and molecular biology.

[38]  Leonie Steinhorst,et al.  CBL-mediated targeting of CIPKs facilitates the decoding of calcium signals emanating from distinct cellular stores. , 2009, The Plant journal : for cell and molecular biology.

[39]  Jun Li,et al.  The plasma membrane Na+/H+ antiporter SOS1 is essential for salt tolerance in tomato and affects the partitioning of Na+ between plant organs. , 2009, Plant, cell & environment.

[40]  J. Kudla,et al.  Multicolor bimolecular fluorescence complementation reveals simultaneous formation of alternative CBL/CIPK complexes in planta. , 2008, The Plant journal : for cell and molecular biology.

[41]  Nadav Sorek,et al.  Dual Fatty Acyl Modification Determines the Localization and Plasma Membrane Targeting of CBL/CIPK Ca2+ Signaling Complexes in Arabidopsis[W] , 2008, The Plant Cell Online.

[42]  Dmitri A. Nusinow,et al.  FKF1 and GIGANTEA Complex Formation Is Required for Day-Length Measurement in Arabidopsis , 2007, Science.

[43]  S. Chen,et al.  SCABP8/CBL10, a Putative Calcium Sensor, Interacts with the Protein Kinase SOS2 to Protect Arabidopsis Shoots from Salt Stress[W][OA] , 2007, The Plant Cell Online.

[44]  Jianhua Zhu,et al.  The plasma membrane Na+/H+ antiporter SOS1 interacts with RCD1 and functions in oxidative stress tolerance in Arabidopsis , 2006, Proceedings of the National Academy of Sciences.

[45]  F. J. Quintero,et al.  Conservation of the Salt Overly Sensitive Pathway in Rice1[C][W][OA] , 2006, Plant Physiology.

[46]  Wei-Hua Wu,et al.  A Protein Kinase, Interacting with Two Calcineurin B-like Proteins, Regulates K+ Transporter AKT1 in Arabidopsis , 2006, Cell.

[47]  S. Yalovsky,et al.  Association of Arabidopsis type-II ROPs with the plasma membrane requires a conserved C-terminal sequence motif and a proximal polybasic domain. , 2006, The Plant journal : for cell and molecular biology.

[48]  Jian-Kang Zhu,et al.  Transgenic Evaluation of Activated Mutant Alleles of SOS2 Reveals a Critical Requirement for Its Kinase Activity and C-Terminal Regulatory Domain for Salt Tolerance in Arabidopsis thaliana , 2004, The Plant Cell Online.

[49]  Jian-Kang Zhu,et al.  Reconstitution in yeast of the Arabidopsis SOS signaling pathway for Na+ homeostasis , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[50]  Q. Qiu,et al.  Regulation of SOS1, a plasma membrane Na+/H+ exchanger in Arabidopsis thaliana, by SOS2 and SOS3 , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[51]  Sebastian Maurer-Stroh,et al.  N-terminal N-myristoylation of proteins: refinement of the sequence motif and its taxon-specific differences. , 2002, Journal of molecular biology.

[52]  Jian-Kang Zhu,et al.  The Putative Plasma Membrane Na+/H+ Antiporter SOS1 Controls Long-Distance Na+ Transport in Plants Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.010371. , 2002, The Plant Cell Online.

[53]  Jian-Kang Zhu,et al.  SOS3 Function in Plant Salt Tolerance Requires N-Myristoylation and Calcium Binding , 2000, Plant Cell.

[54]  J. Killian,et al.  How proteins adapt to a membrane-water interface. , 2000, Trends in biochemical sciences.

[55]  G. von Heijne,et al.  Positively and negatively charged residues have different effects on the position in the membrane of a model transmembrane helix. , 1998, Journal of molecular biology.

[56]  S. Clough,et al.  Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. , 1998, The Plant journal : for cell and molecular biology.

[57]  Jiping Liu,et al.  A calcium sensor homolog required for plant salt tolerance. , 1998, Science.

[58]  A. Aronheim,et al.  Improved efficiency sos recruitment system: expression of the mammalian GAP reduces isolation of Ras GTPase false positives. , 1997, Nucleic acids research.

[59]  R. Roth,et al.  A series of , 1997 .

[60]  L. Stryer,et al.  Sequestration of the membrane-targeting myristoyl group of recoverin in the calcium-free state , 1995, Nature.

[61]  M. Pall,et al.  A series of yeast shuttle vectors for expression of cDNAs and other DNA sequences , 1993, Yeast.

[62]  R. Elble A simple and efficient procedure for transformation of yeasts. , 1992, BioTechniques.

[63]  J. Ramos,et al.  Dual system for potassium transport in Saccharomyces cerevisiae , 1984, Journal of bacteriology.