Gaussian Highpass Filters-based Convolutional Neural Network for Pulmonary Nodules Detection in CT Images

The segmentation of various types of nodules in CT images presents various challenges due to a large amount of information that needs to be processed. In this study, we proposed a Gaussian highpass filter-based convolutional neural network(CNN) for the fully-automated detection of pulmonary nodules in CT scans. In medical image analysis, the dataset sizes are usually too small to train the network. Therefore, for each training data, a set of 2-D patches from differently oriented planes are extracted. The extracted datasets are used as inputs for the proposed framework which comprises multiple streams of 2-D CNN, and the obtained outputs are combined to produce the final classification. We evaluate this strategy on a test set of 888 CT scans and compare it with other CNN or published methodologies using the same dataset. The results indicate that the proposed framework offers significant performance gains over other methods.

[1]  Hao Chen,et al.  Automatic Detection of Cerebral Microbleeds From MR Images via 3D Convolutional Neural Networks , 2016, IEEE Transactions on Medical Imaging.

[2]  Lawrence D. Jackel,et al.  Backpropagation Applied to Handwritten Zip Code Recognition , 1989, Neural Computation.

[3]  Christian Igel,et al.  Deep Feature Learning for Knee Cartilage Segmentation Using a Triplanar Convolutional Neural Network , 2013, MICCAI.

[4]  Youngjin Yoo,et al.  Modeling the Variability in Brain Morphology and Lesion Distribution in Multiple Sclerosis by Deep Learning , 2014, MICCAI.

[5]  Ronald M. Summers,et al.  A New 2.5D Representation for Lymph Node Detection Using Random Sets of Deep Convolutional Neural Network Observations , 2014, MICCAI.

[6]  Bram van Ginneken,et al.  Off-the-shelf convolutional neural network features for pulmonary nodule detection in computed tomography scans , 2015, 2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI).

[7]  Daniel Rueckert,et al.  Medical Image Computing and Computer-Assisted Intervention − MICCAI 2017: 20th International Conference, Quebec City, QC, Canada, September 11-13, 2017, Proceedings, Part II , 2017, Lecture Notes in Computer Science.

[8]  Hao Chen,et al.  Validation, comparison, and combination of algorithms for automatic detection of pulmonary nodules in computed tomography images: The LUNA16 challenge , 2016, Medical Image Anal..

[9]  Bram van Ginneken,et al.  Pulmonary Nodule Detection in CT Images: False Positive Reduction Using Multi-View Convolutional Networks , 2016, IEEE Transactions on Medical Imaging.

[10]  J. Goo A Computer-Aided Diagnosis for Evaluating Lung Nodules on Chest CT: the Current Status and Perspective , 2011, Korean journal of radiology.

[11]  Shuanglu Dai,et al.  A Bregman divergence based Level Set Evolution for efficient medical image segmentation , 2016, 2016 23rd International Conference on Pattern Recognition (ICPR).

[12]  Dinggang Shen,et al.  Deep Learning Based Imaging Data Completion for Improved Brain Disease Diagnosis , 2014, MICCAI.

[13]  Wei Li,et al.  Pulmonary Nodule Classification with Deep Convolutional Neural Networks on Computed Tomography Images , 2016, Comput. Math. Methods Medicine.

[14]  Wei Shen,et al.  Multi-crop Convolutional Neural Networks for lung nodule malignancy suspiciousness classification , 2017, Pattern Recognit..

[15]  A. Jemal,et al.  Annual report to the nation on the status of cancer, 1975-2000, featuring the uses of surveillance data for cancer prevention and control. , 2003, Journal of the National Cancer Institute.

[16]  Xin Geng,et al.  Classification of Lung Nodule Malignancy Risk on Computed Tomography Images Using Convolutional Neural Network: A Comparison Between 2D and 3D Strategies , 2016, ACCV Workshops.

[17]  Hao Chen,et al.  Multilevel Contextual 3-D CNNs for False Positive Reduction in Pulmonary Nodule Detection , 2017, IEEE Transactions on Biomedical Engineering.

[18]  Wei Guo,et al.  Effect of segmentation algorithms on the performance of computerized detection of lung nodules in CT. , 2014, Medical physics.